LOCUS AB008430 3442 bp mRNA linear HUM 13-FEB-1999 DEFINITION Homo sapiens mRNA for CDEP, complete cds. ACCESSION AB008430 VERSION AB008430.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3442) AUTHORS Koyano,Y., Kawamoto,T. and Kato,Y. TITLE Direct Submission JOURNAL Submitted (22-OCT-1997) to the DDBJ/EMBL/GenBank databases. Contact:Takeshi Kawamoto Hiroshima University School of Dentistry, Department of Biochemistry; 1-2-3 Kasumi Minami-ku, Hiroshima, Hiroshima 734, Japan REFERENCE 2 AUTHORS Koyano,Y., Kawamoto,T., Shen,M., Yan,W., Noshiro,M., Fujii,K. and Kato,Y. TITLE Molecular cloning and characterization of CDEP, a novel human protein containing the ezrin-liks domain of the band 4.1 superfamily and the Dbl homology domain of rho guanine nucleotide exchange factors JOURNAL Biochem. Biophys. Res. Commun. 241, 369-375 (1997) COMMENT FEATURES Location/Qualifiers source 1..3442 /cell_type="chondrocyte" /db_xref="H-InvDB:HIT000058154" /db_xref="taxon:9606" /dev_stage="embryo" /mol_type="mRNA" /organism="Homo sapiens" /tissue_type="cartilage" CDS 49..3186 /codon_start=1 /function="Rho Guanine Nucleotide Exchange Factor" /note="Band 4.1 superfamily" /product="CDEP" /protein_id="BAA24267.1" /transl_table=1 /translation="MGEIEQRPTPGSRLGAPENSGISTLERGQKPPPTPSGKLVSIKI QMLDDTQEAFEVPQRAPGKVLLDAVCNHLNLVEGDYFGLEFPDHKKITVWLDLLKPIV KQIRRPKHVVVKFVVKFFPPDHTQLQEELTRYLFALQVKQDLAQGRLTCNDTSAALLI SHIVQSEIGDFDEALDREHLAKNKYIPQQDALEDKIVEFHHNHIGQTPAESDFQLLEI ARRLEMYGIRLHPAKDREGTKINLAVANTGILVFQGFTKINAFNWAKVRKLSFKRKRF LIKLRPDANSAYQDTLEFLMASRDFCKSFWKICVEHHAFFRLFEEPKPKPKPVLFSRG SSFRFSGRTQKQVLDYVKEGGHKKVQFERKHSKIHSIRSLASQPTELNSEVLEQSQQS TSLTFGEGAESPGGQSCRRGKEPKVSAGEPGSHPSPAPRRSPAGNKQADGAASAPTEE EEEVVKDRTQQSKPQPPQPSTGSLTGSPHLSELSVNSQGGVAPANVTLSPNLSPDTKQ ASPLISPLLNDQACPRTDDEDEGRRKRFPTDKAYFIAKEVSTTERTYLKDLEVITSWF QSTVSKEDAMPEALKSLIFPNFEPLHKFHTNFLKEIEQRLALWEGRSNAQIRDYQRIG DVMLKNIQGMKHLAAHLWKHSEALEALENGIKSSRRLENFCRDFELQKVCYLPLNTFL LRPLHRLMHYKQVLERLCKHHPPSHADFRDCRAALAEITEMVAQLHGTMIKMENFQKL HELKKDLIGIDNLVVPGREFIRLGSLSKLSGKGLQQRMFFLFNDVLLYTSRGLTASNQ FKVHGQLPLYGMTIEESEDEWGVPHCLTLRGQRQSIIVAASSRSEMEKWVEDIQMAID LAEKSSSPAPEFLASSPPDNKSPDEATAADQESEDDLSASRTSLERQAPHRGNTMVHV CWHRNTSVSMVDFSIAVENQLSGNLLRKFKNSNGWQKLWVVFTNFCLFFYKSHQDNHP LASLPLLGYSLTIPSESENIQKDYVFKLHFKSHVYYFRAESEYTFERWMEVIRSATSS ASRPHVLSHKESLVY" polyA_site 3442 /note="50 a nucleotides" BASE COUNT 864 a 952 c 927 g 699 t ORIGIN 1 cgccgcagcc gccggcgctg tggagatatt ctctaagccg ctttcatcat gggagaaata 61 gagcagaggc cgaccccagg atcacgactg ggggccccgg aaaattcggg gatcagtacc 121 ttggaacgtg gacagaagcc gcccccaaca ccttcaggaa aactcgtgtc catcaaaatc 181 cagatgctgg atgacaccca ggaggcattt gaagttccac aaagagctcc tgggaaggtg 241 ctgctggatg cagtttgcaa ccacctcaac ctcgtggaag gtgactattt tggcctcgag 301 tttcctgatc acaaaaagat cacggtgtgg ctggatctcc taaaacccat tgtgaaacag 361 attagaaggc caaagcacgt tgttgttaag tttgtggtga aattctttcc gcctgaccac 421 acacaactcc aagaagaact cacaaggtac ctgttcgcgc tgcaggtgaa gcaggacttg 481 gctcaaggca ggttgacgtg taatgacacc agcgcagctc tcttgatttc acacattgtg 541 caatctgaga ttggggattt tgatgaagcc ttggacagag agcacttagc aaaaaataaa 601 tacatacctc agcaagacgc actagaggac aaaatcgtgg aatttcacca taaccacatt 661 ggacaaacac cagcagaatc agatttccag ctcctagaga ttgcccgtcg gctagagatg 721 tatggaatcc ggttgcaccc ggccaaggac agggaaggca cgaagatcaa tctggccgtt 781 gccaacacgg gaattctagt gtttcagggt ttcactaaga tcaatgcctt caactgggcc 841 aaggtgcgga agctgagctt caagaggaag cgctttctca tcaagctccg gccagatgcc 901 aatagtgcgt accaggatac cttggaattc ctgatggcca gtcgggattt ctgcaagtcc 961 ttctggaaaa tctgtgttga acatcatgcc ttctttagac tttttgaaga gcccaaacca 1021 aagcccaagc ccgtcctctt tagccggggg tcatcatttc ggttcagtgg tcggactcag 1081 aagcaggttc tcgactatgt taaagaagga ggacataaga aggtgcagtt tgaaaggaag 1141 cacagcaaga ttcattctat ccggagcctt gcttcacagc ctacagaact gaattcggaa 1201 gtgctggagc agtctcagca gagcaccagc cttacatttg gagaaggtgc cgaatctcca 1261 gggggccaga gctgccggcg aggaaaggaa ccgaaggttt ccgccgggga gccggggtcg 1321 cacccgagcc ctgcgccgag gagaagcccc gcgggtaaca agcaggcgga cggagccgcc 1381 tcggcgccca cggaggaaga ggaggaggtc gttaaggata ggacccagca gagtaaacct 1441 cagcccccgc agccaagcac aggctccctg actggcagtc ctcacctttc cgagctgtct 1501 gtgaactcgc aggggggagt ggcccctgcc aacgtgacct tgtctcccaa cctgagcccc 1561 gacaccaagc aggcctctcc cttgatcagc ccgctgctga atgaccaggc ctgcccccgg 1621 acggacgatg aggatgaggg ccggaggaag agattcccaa ctgataaagc gtacttcata 1681 gctaaggaag tgtctaccac cgagcgaaca tatctgaagg atctcgaagt tatcacttcg 1741 tggtttcaga gcacagtgag caaagaggac gccatgccgg aagcactgaa aagtctcata 1801 ttcccgaatt ttgaaccttt gcacaaattt catactaatt ttctcaagga aattgagcaa 1861 cgacttgccc tgtgggaagg ccgctcaaat gcccaaatca gagattacca aagaatcggc 1921 gatgtcatgc tgaagaacat tcagggcatg aagcacctgg cggctcacct gtggaagcac 1981 agcgaggcct tggaggccct ggagaatgga atcaagagct cccggcggct ggagaacttc 2041 tgcagagact ttgagctgca gaaggtgtgt tacctaccgc tcaacacctt cctcctgcgg 2101 ccactgcacc ggctcatgca ctacaagcag gtcctggagc ggctgtgcaa acaccacccg 2161 ccgagccacg ccgacttcag ggactgccga gccgctttgg cagagatcac ggagatggtg 2221 gcacagctcc acggtacgat gatcaagatg gagaatttcc agaagctgca cgaactcaag 2281 aaagatttga ttggcattga caatcttgtg gttccgggaa gggagttcat ccgtctgggc 2341 agcctcagca agctctcggg gaaggggctc cagcagcgca tgttcttcct gttcaacgac 2401 gtcctgctat acacgagccg ggggctgacg gcctccaatc agtttaaagt ccacgggcag 2461 ctcccgctct atggcatgac gattgaggag agcgaagacg agtggggggt gccccactgc 2521 ctgaccctcc ggggccagcg gcagtccatc atcgtggccg ccagttctcg gtccgagatg 2581 gagaagtggg ttgaggacat ccagatggcc attgacctgg cggagaagag cagcagcccc 2641 gcccctgagt tcctggccag cagcccccct gacaacaagt cccctgatga agccaccgcg 2701 gctgaccagg agtcagagga tgacctgagc gcctcgcgca catcgctgga gcgccaggcc 2761 ccgcaccgcg gcaacacaat ggtgcacgtg tgctggcacc gcaacaccag cgtctccatg 2821 gtggacttca gcatcgcagt ggagaatcag ttgtctggaa acctgctgag gaaattcaaa 2881 aacagcaacg ggtggcagaa gctgtgggtg gtgttcacaa acttctgcct gttcttctac 2941 aaatcacacc aggacaatca tccccttgcc agcctgcctc tgctcggcta ctcgctcacc 3001 atcccctctg agtccgagaa catccagaaa gactacgtgt tcaagctgca cttcaagtcc 3061 cacgtctact acttcagggc ggaaagcgag tacacgttcg aaaggtggat ggaagtgatc 3121 cgcagtgcca ccagctctgc ctcgcgaccc cacgtgttga gccacaaaga gtctcttgtg 3181 tattgatggc cggacacact cgtttccgca gtggctgctt tcctggaaga cgtttccttt 3241 cttctgtatt aatgaagcct ggtaaaatta acacctgtct gaaaatcaaa aacatggctt 3301 cccagcagct ctcctgtctc cacagccgcg ttttttaacc ccgacctctc agcgtttgaa 3361 tgaacagcgc tcccacctcc agtcctggca tccgctgggg gcgctgttct ttagctagtg 3421 ccagtattaa aacattgtca tt //