LOCUS AB006757 4714 bp mRNA linear HUM 13-FEB-1999
DEFINITION Homo sapiens mRNA for PCDH7 (BH-Pcdh)c, complete cds.
ACCESSION AB006757
VERSION AB006757.1
KEYWORDS PCDH7 (BH-Pcdh)a.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4714)
AUTHORS Yoshida,K.
TITLE Direct Submission
JOURNAL Submitted (20-AUG-1997) to the DDBJ/EMBL/GenBank databases.
Contact:Kenichi Yoshida
Institute of Medical Science, Department of Virology; 4-6-1
Shirokanedai, Minato-ku, Tokyo 108, Japan
REFERENCE 2
AUTHORS Yoshida,K., Yoshitomo-Nakagawa,K., Seki,N., Sasaki,M. and Sugano,S.
TITLE Cloning, expression analysis, and chromosomal localization of
BH-protocadherin (PCDH7), a novel member of the cadherin
superfamily
JOURNAL Genomics 49, 458-461 (1998)
COMMENT
FEATURES Location/Qualifiers
source 1..4714
/cell_line="MKN28"
/cell_type="gastric carcinoma"
/chromosome="4"
/clone="BH-Pcdh-c"
/db_xref="H-InvDB:HIT000058091"
/db_xref="taxon:9606"
/map="4p15"
/mol_type="mRNA"
/organism="Homo sapiens"
CDS 856..4458
/product="PCDH7 (BH-Pcdh)c"
/protein_id="BAA25196.1"
/translation="MLRMRTAGWARGWCLGCCLLLPLSFSLAAAKQLLRYRLAEEGPA
DVRIGNVASDLGIVTGSGEVTFSLESGSEYLKIDNLTGELSTSERRIDREKLPQCQMI
FDENECFLDFEVSVIGPSQSWVDLFEGQVIVLDINDNTPTFPSPVLTLTVEENRPVGT
LYLLPTATDRDFGRNGIERYELLQEPGGGGSGGESRRAGAADSAPYPGGGGNGASGGG
SGGSKRRLDASEGGGGTNPGGRSSVFELQVADTPDGEKQPQLIVKGVYEADLAENSAP
GTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDREEVNQL
RFTVMARDRGQPPKTDKATVVLNIKDENDNVPSIEIRKIGRIPLKDGVANVAEDVLVD
TPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASDTEGDQNKKKYFLHTSTPLDYEA
TREFNVVIVAVDSGSPSLSSKNSLIVKVGDTNDNPPMFGQSVVEVYFPENNIPGERVA
TVLATDADSGKNAEIAYSLDSSVMGIFAIDPDSGDILVNTVLDREQTDRYEFKVNAKD
KGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRN
AEMSLYIEENNNIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVS
LFVMDENDNAPTVTLPKNISYTLLPPSSNVRTVVATVLATDSDDGINADLNYSIVGGN
PFKLFEIDPTSGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTVVHVFVNESVSN
ATAIDSQIARSLHIPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARY
CRSKNKNGYEAGKKDHEDFFTPQQHDKSKKPKKDKKNKKSKQPLYSSIVTVEASKPNG
QRYDSVNEKLSDSPSMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKHQ
AVQDLPPANTFVGAGDNISIGSDHCSEYSCQTNNKYSKQPFRRVTFSVVSQPQDPHQG
SLQSCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVDSRPLPDVALTGK
CTRECDEYGHSDSCWMPVRTSPERKKSQPKLSTFMPVDERGSQEKLANGEAAIMGDRN
RNLLNKKLTSSYETFSAASFSKNEEANPEDIPLTKTGEYKPSPVNTLTRREVYL"
BASE COUNT 1129 a 1314 c 1373 g 898 t
ORIGIN
1 gaaaaaagag aaacccgcgc tctccggggt gagaagggac tgactctggg cgtctctgaa
61 gatggctcgg gcttctcttt ggcgcgccgg ggggaccctg acactgaccg ctctgtgacg
121 cgagtagtct cccctgcacc gtgcccgaag cgacgtgccg ggggattttt cattctcgat
181 ctgttgactg gctcccccgc tgcatgagca gatcggagtt gagactggct tgttgctggc
241 cccagcgcct ggtgcaggaa gcgactcacg tttgtctggg tggccggagc cggagccgga
301 gcagagcctg ggtttggagt gagtgcctgg aacgtgaatt ggactcaact cgagtagcag
361 caaagaccag cgggctggca ggcgggggag gctgcaggct cattccccac ctcttcccag
421 ccccactgcc cgtctgccgg agcggttctg gcccctccga cagagcgggg actacgagcc
481 ggggattctc cgcccgctga ggggatgact ctgggttggg ggagcgccga acccgcggcg
541 cgcagtgtcc cgtgaactgt gagtactgcg actgaacggc ggcaggcgag cgggcgatta
601 gcacccattg catgaattat gaaacaataa ctttcggaag aagcaggagg aaaaaaagaa
661 gcatctatcg ctgccctccc acccccattc ccggccaact ctccacgccg cttttgcccc
721 ctccctcccc tccctctcgc tccttccttt ccgggagagg ggagaggact cgggggaggg
781 caggcggccg gccccggagg aggggggcgc cgagggggct gtggttagaa ggagcagtag
841 cagcagcagg agaagatgct gaggatgcgg accgcgggat gggcgcgcgg ctggtgcttg
901 ggctgctgcc tcctcctgcc gctctcgttc agcctggcgg ccgccaagca gctcctccgg
961 taccggctgg ccgaggaggg ccccgccgac gtccgcatcg gcaacgtggc ttcagacctg
1021 ggcatcgtga ccggatcggg tgaggtgact ttcagcctgg agtccggttc cgagtacctg
1081 aagatcgaca acctcactgg cgagctgagc acgagcgagc ggcgcatcga ccgcgagaag
1141 ctgccccagt gtcagatgat cttcgacgag aacgagtgct tcctggactt cgaggtgtcg
1201 gtgatcgggc cctcgcagag ctgggtggac ctgtttgagg gtcaggtcat cgtgcttgac
1261 atcaacgaca acacgcccac cttcccgtcg cccgtgctca cgctcacggt ggaggagaat
1321 cggccggtgg gcacacttta cctgctgccc acagccaccg accgcgactt cggccgcaac
1381 ggcatcgagc gctacgagct gctccaggag cccggaggcg gcggcagcgg cggcgagagc
1441 cggcgcgccg gggcggccga cagcgccccc taccccgggg gcggcgggaa cggcgcgagc
1501 ggcggcggct cgggaggctc caagcggcgg ctggacgcat cagagggcgg cggcggcacc
1561 aaccccggcg gccgcagcag cgtgttcgag ctgcaggtgg cggacacccc ggacggcgag
1621 aagcagccgc agctgatcgt gaagggcgtg tacgaggccg acttggctga gaacagcgcc
1681 ccggggaccc ccatcctgca actgcgcgca gccgacttgg acgtgggggt caacgggcag
1741 atcgaatacg tgttcggggc ggccaccgag tcggtgaggc ggctgctgcg ccttgacgag
1801 acgtccggct ggctcagcgt cctgcaccgg atcgaccgcg aggaggtgaa ccagctgcgc
1861 ttcacggtca tggcccgcga ccgcgggcag ccccccaaga ccgacaaggc caccgtggtc
1921 cttaacatca aagacgagaa cgacaacgtg ccgtccattg aaatccgcaa gattgggcgc
1981 atccccctca aggacggggt ggccaacgtg gccgaggacg ttctggtcga cacccccatc
2041 gctctggtgc aggtgtccga ccgagaccaa ggcgagaacg gggtggtcac ctgcaccgtg
2101 gtgggcgacg tgcccttcca gctcaagcca gccagcgaca ccgagggcga ccagaacaag
2161 aaaaagtact tcttgcacac ctcgacccct ctggactatg aggccacccg ggagttcaac
2221 gtggtcatcg tggcggtgga ctcaggcagc cccagcctct cgagcaagaa ctccctgatt
2281 gtcaaggtgg gagacaccaa cgacaacccg cccatgttcg gccagtcggt ggtggaggtt
2341 tacttccctg agaacaacat cccgggcgag agggtggcca cggtgctggc gacagacgca
2401 gacagcggta agaacgccga gatcgcctac tcgctggact cctctgtgat ggggatcttt
2461 gccatcgatc ccgattctgg ggacatcctg gtcaataccg tgctggaccg cgagcagact
2521 gacaggtatg agtttaaagt taacgccaaa gacaaaggca tccccgtgct gcagggcagc
2581 actacggtga ttgtgcaggt ggctgataaa aatgacaatg accctaagtt tatgcaggac
2641 gtcttcacct tttatgtgaa agaaaacttg cagcccaaca gccctgtggg gatggtcacc
2701 gtgatggatg ctgacaaggg gcggaatgca gagatgagcc tgtacataga ggagaacaat
2761 aacatttttt ctattgaaaa tgacacgggg accatttact ccacaatgtc ttttgaccgg
2821 gaacatcaga ccacatacac tttcagagtc aaggctgtgg atgggggaga tcctcccaga
2881 tctgccacag ctacagtctc gctttttgtg atggatgaaa atgacaatgc tcccacagtt
2941 acccttccca aaaacatttc ctacacttta ctgccacctt cgagtaatgt caggacagta
3001 gtagctacag tgttggcaac agacagtgat gatggcatca atgcagacct gaactacagc
3061 attgtgggag gaaatccctt caagctgttt gaaattgatc ccactagtgg tgtggtttcc
3121 ttagtgggaa aactcaccca aaagcattat ggcttgcaca ggttggtggt gcaagtgaat
3181 gacagtgggc agccttccca gtccaccacg actgtggtgc acgtgtttgt caatgaaagt
3241 gtttctaatg caactgcgat tgactcccag atagctagaa gtttgcacat cccactcacc
3301 caggatatag ctggtgaccc aagctatgaa attagcaaac agagactcag tattgtcatt
3361 ggcgtagttg ctggcattat gacggtgatt ctaatcatct taattgtagt gatggcaagg
3421 tactgcaggt ccaaaaataa aaatggctat gaagccggca aaaaagatca cgaagacttt
3481 tttacacccc aacagcatga caaatctaaa aagcctaaaa aggacaagaa aaacaaaaaa
3541 tctaagcagc ctctctacag cagcattgtc actgtggagg cttctaagcc aaatggacag
3601 aggtatgata gtgtcaatga gaagctgtca gacagcccaa gcatggggcg atacagatcc
3661 gttaatggtg ggcccggcag tcctgacctg gcaaggcatt acaaatctag ttccccattg
3721 cctactgttc agcttcatcc ccagtcacca actgcaggaa aaaaacacca ggccgtacaa
3781 gatctaccac cagccaacac atttgtggga gcaggagaca acatttcaat tggatcagat
3841 cactgctctg agtacagctg tcaaaccaat aacaagtaca gcaaacagcc atttcgtaga
3901 gtgacgtttt ctgttgtgag tcagcctcag gacccacatc aggggtcact gcagagttgc
3961 tatgacagcg ggctggagga gtcagaaaca ccaagcagta agagttcatc agggccaaga
4021 ctgggtgcgc ttccactccc agaggacaac tatgaaagga ccacgccgga tggcagtgtt
4081 gattcaaggc ctcttccaga tgtagccctg actgggaagt gcactcgtga gtgtgatgag
4141 tatggccact cagactcctg ctggatgccg gtccgcactt ctccggagag gaagaagagc
4201 cagcctaaac tgtccacttt catgcctgtt gatgaacgag gaagccagga aaagctggcc
4261 aatggggagg ccgccatcat gggtgaccgc aacagaaacc tcctgaacaa aaagttgacc
4321 tcatcctatg agaccttcag tgcagctagt ttcagcaaaa atgaggaagc caaccctgag
4381 gatattcccc ttacaaaaac aggggaatat aagccatctc ctgtcaatac tctcactaga
4441 agagaagttt acctgtaggc tataaaggag caacagcaaa gttctttaca tgtatgaaaa
4501 ggagaataag gggcaaaaac cttacaaagc aaaacgttta atcacaaaga gggggctacc
4561 aaagagacaa agctttgcct gccacttctg cctccagatc aggcctttag tgatactgtt
4621 agcctgattc tactgtacaa tgtagaaaca tccttgttac ttgcatgtct aaccccttca
4681 ctgattccca acactcactt tctcttcccc accc
//