LOCUS AB004276 3373 bp mRNA linear ROD 27-DEC-2006
DEFINITION Rattus rattus mRNA for protocadherin 4, complete cds.
ACCESSION AB004276
VERSION AB004276.1
KEYWORDS .
SOURCE Rattus rattus (black rat)
ORGANISM Rattus rattus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
REFERENCE 1 (bases 1 to 3373)
AUTHORS Obata,S.
TITLE Direct Submission
JOURNAL Submitted (24-MAY-1997) to the DDBJ/EMBL/GenBank databases.
Contact:Shuichi Obata
Nagoya University School of Medicine, Department of Anatomy; 65
Tsurumai, Showa, Nagoya, Aichi 466, Japan
REFERENCE 2
AUTHORS Obata,S., Sago,H., Mori,N., Davidson,M., St John,T. and Suzuki,S.T.
TITLE A common protocadherin tail: multiple protocadherins share the
same sequence in their cytoplasmic domains and are expressed in
different regions of brain
JOURNAL Cell Adhes. Commun. 6, 323-333 (1998)
COMMENT
FEATURES Location/Qualifiers
source 1..3373
/db_xref="taxon:10117"
/mol_type="mRNA"
/note="Common name: Rat"
/organism="Rattus rattus"
CDS 150..2936
/codon_start=1
/product="protocadherin 4"
/protein_id="BAA20359.1"
/transl_table=1
/translation="MTASQNQHRHGRLVLFCTLMGTLCKIGVGQIRYSVPEETDKGTV
VGNISKDLGLEPRELAERGVRIVSRGRSQLFSHESAGRNLVTASRIDREELCAQSIPC
LVNINILVEEKGKLFGVEITDINDNNPKFHVGDLEVKINEIAAPGARYPLPKAVDPDV
GINSLQSYQLSPNRHFSLDIQRGDDGTINPELVLENTLDREEEPSHHLILTASDAERR
RSSTALIQVTVLDTNDNAPVFDQPVYRVKVLENVTPGTLLLTVRASDPDEGANGKVTY
KFQKINDKQSLLFHLHENTGEMTVAKNLDYEECSLYEMEIQAEDVGALLGRSKVVIMV
EDVNDNRPEVTITSLFNPVLENSLPGTVIAFLNVHDRDSGKNGQVVCYTHDNLPFKLE
KSIDNYYRLVTWKYLDREKVSIYNITVIASDLGAHSVTETYIALIVADTNDNPPRFPH
TSYTAYIPENNLRGASIFSLTAHDPDSQENAQVTYSVSEDTIQGVPLSSYISINSDTG
VLYALHSFDFEKIQDLQLLVVATDSGSPPLSSNVSLSLFVLDQNDNAPEILYPSFPTD
GSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRT
ARALLDRDALKQNLVMAVQDHGQPPLSATVTLTVAVANSIPEVLADLSSIRTPGVPED
SDITLHLVVAVAVVSCVFLVFVIVLLALRLQRWQKSRQLQGSKGGLAPAPPSHFVGID
GVQAFLQTYSHEVSLTSGSQTSHIIFPQPNYADMLINQEGCEKNDSLLTSIDFHESNR
EDACAPQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAA
DGSSTLGGGTGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAG
GNGNNNKSGKKEKK"
BASE COUNT 872 a 924 c 828 g 749 t
ORIGIN
1 agtccaacgg cggaactgcg gagaaattct gtccctccgt gtatggctct ccagctttcc
61 gtaagattat catttccatc atcacaagcc aaggtaatcc aggcacctgg gcccggtgaa
121 gactgagagg attcttttga caataaacaa tgactgcttc ccagaatcaa caccgtcatg
181 gccggctggt gctgttctgt acgctgatgg ggacgctgtg caagatcggg gtaggtcaga
241 ttcgctactc ggtgccagaa gagacagata aaggcactgt tgtaggaaac atctccaagg
301 acctggggct ggagccccgc gagctggcgg agcgaggggt ccgcatcgtc tctagaggta
361 ggtcgcagct tttctcccat gaatccgcgg ggcgcaactt ggtcaccgcg agcaggatag
421 accgggagga gctgtgcgcc cagagtattc cctgtcttgt aaatattaac atcctagttg
481 aggagaaagg gaaactcttt ggagtagaaa taactgatat taacgataat aatccgaagt
541 tccatgttgg ggatctggag gtgaaaatta acgaaatcgc tgcccctgga gcacggtatc
601 cacttccaaa agctgttgac ccagatgtgg gcataaactc cctccagagt taccagctca
661 gccccaaccg gcacttctct ctggacattc agaggggaga cgacggaact ataaacccag
721 agctggtgct ggagaacacc ctggaccgag aggaagagcc ctctcaccac ctgatcctca
781 ccgcctccga tgccgaacgc cgccgctcca gcacagcgct catccaggtc acagtgttgg
841 ataccaacga caatgcccct gttttcgacc aaccggttta ccgcgtgaaa gtcctcgaga
901 acgtgacccc aggcactctg ctgctcacag tgagagctag cgacccggat gagggtgcca
961 acggaaaagt gacatataaa ttccaaaaaa tcaatgacaa acaatcgcta ctattccatc
1021 ttcatgaaaa cacgggggaa atgacagtag caaagaatct ggactatgaa gaatgctcat
1081 tgtatgaaat ggaaatacag gctgaagatg tgggggcgct tctggggagg agcaaagtgg
1141 taattatggt agaagatgta aatgacaatc ggccagaagt gaccattaca tccttgttta
1201 acccggtatt ggaaaattct cttcccggga cagtaattgc cttcttgaat gtgcatgacc
1261 gagactctgg aaagaacggc caagttgtct gttacacgca tgataactta ccttttaaat
1321 tagaaaagtc aatagataat tattatagat tggtgacatg gaaatatttg gaccgagaaa
1381 aagtctccat ctacaatatc acagtgatag cctcagatct aggagcccac tctgtcactg
1441 aaacttacat tgccctgatt gtggcagaca ctaatgacaa ccctcctcgt tttcctcaca
1501 cctcctacac agcctatatt ccagagaaca acctgagggg cgcctccatc ttctcactga
1561 ctgcacatga tcctgacagt caggaaaatg cacaggtcac ttactctgtg tctgaggaca
1621 ccatacaggg agtgcctttg tcctcttata tctccatcaa ctcagatact ggtgtcctgt
1681 atgcactgca ctcttttgac ttcgagaaga tacaagactt gcagctactg gttgttgcca
1741 ctgacagtgg aagcccacct ctcagcagca atgtgtcatt gagcttgttt gtgttggacc
1801 agaacgacaa cgcacctgag attctatatc ctagcttccc cacagatggc tccactggtg
1861 tggaactagc accccgctct gcagagcctg gatacctagt gaccaaagtg gtggcagtgg
1921 acaaagactc aggacagaat gcttggctgt cctaccgtct gctgaaggcc agcgaacctg
1981 ggctcttctc tgtaggactt cacacgggtg aggtgcgtac agcgagggcc ctgctggaca
2041 gagatgctct caaacagaat ctggtgatgg ccgtgcagga ccatggccaa ccccctctct
2101 cggccactgt aactctcact gtggcagtgg ctaacagcat ccctgaggtg ttggctgact
2161 tgagcagcat taggacccct ggggtaccag aggattctga tatcacgctc cacctggtgg
2221 tggcagtggc tgtggtctcc tgtgtcttcc ttgtctttgt cattgtcctc ctagctctca
2281 ggcttcagcg ctggcagaag tctcgccagc tccagggctc caaaggtgga ttggctcctg
2341 cacctccatc acattttgtg ggcatcgacg gggtacaggc ttttctacaa acctattctc
2401 atgaagtctc gctcacttca ggctcccaga caagccacat tatctttcct cagcccaact
2461 atgcagacat gctcattaac caagaaggct gtgagaaaaa tgattcctta ttaacatcca
2521 tagattttca tgagagtaac cgtgaagatg cttgcgcccc gcaagccccg cccaacactg
2581 actggcgttt ctctcaagcc cagagacccg gcacgagcgg atcccaaaat ggggatgaaa
2641 ccggcacctg gcccaacaac cagttcgata cagagatgct gcaagccatg atcttggcct
2701 ctgccagtga agccgctgat gggagctcca ctctgggagg gggcactggc actatgggtt
2761 tgagcgctcg atatggaccc cagtttaccc tgcagcacgt gcctgactac cgccagaacg
2821 tgtacatccc tggcagcaat gccacactga ccaacgcagc tggcaaacga gatggcaagg
2881 ctccggcagg cggcaatggc aacaacaaca agtcgggcaa gaaagagaag aagtaatatg
2941 gaggccaggc cttgagccac agggcagcct ccctccccag ccagtccagc ttgtccttac
3001 ttgtacccag gcctcagaat ttcagggctc accccaggat tctggtagga gccacagcca
3061 ggccatgctc cccgttggga aacagaaaca agtgcccaag ccaacacccc ctctttgtac
3121 cctagggggg ttgaatatgc aaagagagtt ctgctgggac cccctatcca atcagtgatt
3181 gtacccacat aggtagcagg gttagtgtgg atacacacac acacacacac acacacacac
3241 acacacccct tgtcctccgc agtgcctgcc actttctggg actttctcat ccccctacgc
3301 ccttccttta tcctctccca cccagacaca gctgctggag aataaatttg gggatgctga
3361 tgctaaaaaa aaa
//