LOCUS Y10829 1214 bp DNA linear BCT 23-OCT-2008
DEFINITION P.alcaligenes pECB2 plasmid DNA.
ACCESSION Y10829
VERSION Y10829.1
KEYWORDS replication initiator protein; replicon.
SOURCE Pseudomonas alcaligenes
ORGANISM Pseudomonas alcaligenes
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
REFERENCE 1
AUTHORS Charnock C.
TITLE Characterization of the cryptic plasmids of the Pseudomonas
alcaligenes type strain
JOURNAL Plasmid 37(3), 189-198(1997).
PUBMED 9200222
REFERENCE 2 (bases 1 to 1214)
AUTHORS Charnock C.
JOURNAL Submitted (27-JAN-1997) to the INSDC. C. Charnock, Institute of
Pharmacy, Department of Microbiology, University of Oslo, Postbox
1068 Blindern, 0316 Oslo 3, NORWAY
FEATURES Location/Qualifiers
source 1..1214
/organism="Pseudomonas alcaligenes"
/plasmid="pECB2"
/strain="CCM 2655ft"
/mol_type="genomic DNA"
/db_xref="taxon:43263"
repeat_region 332..387
/rpt_type=DIRECT
repeat_region 397..409
/rpt_type=DIRECT
misc_feature 415..423
/note="dnaA box"
repeat_region 426..436
/rpt_type=INVERTED
regulatory 442..447
/regulatory_class="minus_35_signal"
repeat_region 445..455
/rpt_type=INVERTED
regulatory 465..470
/regulatory_class="minus_10_signal"
regulatory 468..473
/regulatory_class="minus_10_signal"
CDS 501..1214
/transl_table=11
/gene="Rep"
/product="replication initiator protein"
/db_xref="GOA:P95424"
/db_xref="InterPro:IPR000525"
/db_xref="InterPro:IPR036388"
/db_xref="InterPro:IPR036390"
/db_xref="UniProtKB/TrEMBL:P95424"
/protein_id="CAA71788.1"
/translation="MSELVDNKVTQSNRLVEASHTLTLNEKRLVLCAASLIDPRKPLP
KDGYLTIRADAFADVFGLDVRHAYEALDDAASRLFRADIRRYSKGKIVERMRWVFHVK
YREGQGCVELGFSPTVLPHLTMLNREFTSYQLKQIGSLSSFYAVRLYELMSQFLKLGQ
RECTLDQLRQMLDLGDKYQDVKNLRVRVLDPALKELNAGTDLAVTAEPRRQGRKIVGF
SFTITKNDQLPLNLEAACN"
BASE COUNT 242 a 377 c 357 g 238 t
ORIGIN
1 ctgcaggccg caccaacccc ttgaccccgc tccgctctac cagccgactc gccccccgct
61 tcctgatcac ccggcaagcg aagcgcgcag gccgaaggca gcgccgtgaa ggagcgaaga
121 gcccttgcag ggcctccagg tagggactcg gtgtcagtag ggcgcacagc gactggaagg
181 gcgccagacc tacaggtcag gtgccgaatc agggagagat tccggctctg cttttgcccc
241 ctcggggctt ttaaatcttg ttgttcttgt ttttaccttg ttttcggaca ccccaaagcc
301 ttgatttgta agggttttat gcctcctatc aggtacagat tccgggttta agaggtacag
361 attccgggtt taagaggtac agattccggc tctatggggt acagattccg gctattttcc
421 acaggacagg tacaggtaca gttgcctgta cctgtacctt atgcaactat caggtacaga
481 ttccgtgcag ggggttgcag atgagcgagc tggtcgataa caaggtcacc cagtcaaacc
541 ggctggtcga ggcgtcacac acgctgacgc tcaacgagaa gcgcctcgtg ctgtgcgctg
601 cgtcgctgat agatccacgc aagccgctac ccaaggacgg ctacctgacc atccgggccg
661 atgccttcgc tgacgttttc ggcctggacg tgcgccacgc ctacgaggcc ctggacgatg
721 ccgccagccg cctttttcga gccgacatcc gtcgctactc gaagggcaag atcgtcgagc
781 gcatgcgctg ggtgttccat gtgaagtacc gcgagggcca gggctgcgta gagctgggct
841 tctcgcctac ggtgctgccg cacctgacga tgctcaaccg ggagttcacc agctaccagc
901 ttaagcagat cggcagcttg tccagcttct acgccgtgcg gctgtacgag ctcatgagcc
961 agttcctcaa gctcggccag cgcgagtgca ccctcgatca gctgcgccag atgctcgacc
1021 tgggcgacaa gtaccaggac gtgaagaacc tccgcgtgcg ggtgctcgat ccggcgctca
1081 aggagctgaa cgccggcact gacctggcag tgacggcaga gcctcgccgc cagggccgca
1141 agatcgtggg cttcagcttc accatcacca agaacgacca gctaccgctg aacctggagg
1201 ccgcatgcaa ctga
//