LOCUS X06026 1789 bp DNA linear HUM 14-NOV-2006 DEFINITION Homo sapiens partial CD3G gene, exon 1 (and joined CDS). ACCESSION X06026 VERSION X06026.1 KEYWORDS Alu repetitive sequence; CD3 protein; repetitive sequence; T-cell receptor; T-cell receptor gamma. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1789) AUTHORS Tunnacliffe A., Buluwela L., Rabbits T.H. TITLE Physical linkage of three CD3 genes on human chromosome 11 JOURNAL EMBO J. 6(10), 2953-2957(1987). PUBMED 2826124 COMMENT see x06026-X06032 for CD3-gamma genomic exon 1-7 sequences referring to the authors the BglII site at the 5' end of CD3-gamma gene is identical to that at the end of the CD3-delta sequence (see X03934 = <hstcrt3d>; therefore CD3-gamma and CD3-delta genes are situated about 1.6 kb apart, in a head-to head orientation. FEATURES Location/Qualifiers source 1..1789 /organism="Homo sapiens" /chromosome="11" /map="11q23" /mol_type="genomic DNA" /clone_lib="(lambda)2001" /clone="(lambda)(gamma)7" /cell_line="B-cell line SH" /db_xref="taxon:9606" repeat_region 568..878 /rpt_family="Alu" mRNA join(1293..1434,X06027.1:54..77,X06028.1:28..255, X06029.1:80..211,X06030.1:23..66,X06031.1:54..137, X06032.1:45..>217) /gene="CD3G" exon 1293..1434 /gene="CD3G" /note="label:ex1" CDS join(1380..1434,X06027.1:54..77,X06028.1:28..255, X06029.1:80..211,X06030.1:23..66,X06031.1:54..119) /gene="CD3G" /product="T-cell receptor T3 gamma chain" /db_xref="GOA:P09693" /db_xref="HGNC:HGNC:1675" /db_xref="InterPro:IPR003110" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR015484" /db_xref="InterPro:IPR032052" /db_xref="InterPro:IPR036179" /db_xref="PDB:1SY6" /db_xref="UniProtKB/Swiss-Prot:P09693" /protein_id="CAA29428.1" /translation="MEQGKGLAVLILAIILLQGTLAQSIKGNHLVKVYDYQEDGSVLL TCDAEAKNITWFKDGKMIGFLTEDKKKWNLGSNAKDPRGMYQCKGSQNKSKPLQVYYR MCQNCIELNAATISGFLFAEIVSIFVLAVGVYFIAGQDGVRQSRASDKQTLLPNDQLY QPLKDREDDQYSHLQGNQLRRN" misc_feature 1380..1434 /note="label:start" BASE COUNT 469 a 457 c 448 g 415 t ORIGIN 1 agatctagca gcttcttgtc agtgggaggt tgggctttag agaccccagc cagagatttg 61 aatcctgggt ccaatactgc ctacctgtgg ggcctgggcc agccataaaa tttttcagag 121 tcttattcca ttagtaccat tattaggatt caaacaagat atttgcatgg tgcctcacgc 181 atcatatgtg ctcattaagg ggtagttatt aataataata taattgactg acaggcaata 241 ttgagcctcc cggtgagaca aatggacctt tttcccctgt ggcctacgag gatctgaaac 301 tcttcacgct gctgcagtta gactgtcact tacctgggga cagagtcatg cctgtcttgc 361 tcactgctgt atcttgtgcc tggcacataa cgggagctct gcacattttt gttggctcac 421 tgactgactg gctgagggag ataggggcct gagatcctgg acattcagtc cgggctctgg 481 cccctgaaaa tgtgctggcc tgtcctcgga attgttccac ctattgcctt ccaggcgcct 541 ctttcatgat ctcaaaagaa tagtgaaacc aggtgccgtg tctcacgcct gtaatcccaa 601 cactttggga ggctgaggca ggtggatcac aaggtcagga gttcgagacc agcctgacca 661 acaaggtgaa accccgtctc tactaaaaat acaaaaatta gccgggcttg ctggcacgca 721 cctgtaatct cagctactca ggaggctgag gcaggagaat cgcttgaacc ccggaggtgg 781 aggttgcagt gagctgagat agcgccactg cactccagcc tgggcaacaa agtgagactc 841 tgtctcaaaa aagaaaaaga aaaaaaaagt gaaaaaaatt cctgaatgaa ggcctggact 901 gaggtggctt tccatttgga ggtccagccc caagcatctg agagtccctc ctaaattcat 961 tacctacagc aacaacaact agcaacaagt aacaactggc tacgatccta acaactaatg 1021 acagggacat ttatctccct catgaagaaa cggtcccagg accatctccc acccagcatc 1081 cattgcggtt ccctgtgcaa gatgagtctc tgagtgggaa tccagcactc tctccctctt 1141 cttccccacc accttcaccc tccttaacgg aaaaacaaaa ggcatctgca cctgcagccc 1201 tgctgaggcc cctgctgctc acacttgcag cagagggtgg aggctctggg ttcttgcctt 1261 ctctcaaagg ccccagcccc aacagtgatg ggtggagcca gtctagctgc tgcacaggct 1321 ggctggctgg ctggctgcta agggctgctc cacgcttttg ccggaggaca gagactgaca 1381 tggaacaggg gaagggcctg gctgtcctca tcctggctat cattcttctt caaggtaagg 1441 gcctactagg ggtctggaag cctggggaag ggctcaaggg aagagcccat cactagtgag 1501 acaggaatat tggtatccct aaccttcagc ctacctctgc tgtcacctta gagttcaaag 1561 aagggcaaaa tggaggctct taactgttct ctgctagaga gaaacagtgt cccatggagg 1621 agaaggaatc cttgtctctg aaaaatgcaa acagagtact taaatggctg aagagaggac 1681 cctgttaccg ccatcttaga tttgaatgca gcccaaaagg gcataggcca agaaactaaa 1741 aggaaaaagt atatgttccc tacttcagag ctgggggcta gcagtcgac //