LOCUS X00182 5046 bp DNA linear VRT 14-NOV-2006
DEFINITION Gallus gallus cytoplasmic beta-actin gene.
ACCESSION X00182
VERSION X00182.1
KEYWORDS actin; beta-actin.
SOURCE Gallus gallus (chicken)
ORGANISM Gallus gallus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes;
Phasianidae; Phasianinae; Gallus.
REFERENCE 1 (bases 1 to 5046)
AUTHORS Kost T.A., Theodorakis N., Hughes S.H.
TITLE The nucleotide sequence of the chick cytoplasmic beta-actin gene
JOURNAL Nucleic Acids Res. 11(23), 8287-8301(1983).
PUBMED 6324080
COMMENT The nucleotide sequence codes for a protein which is identical
to the bovine beta-actin, to human fibroblast beta-actin, and
to the protein sequence predicted by the nucleotide sequence
of the rat beta-actin gene.
FEATURES Location/Qualifiers
source 1..5046
/organism="Gallus gallus"
/mol_type="genomic DNA"
/db_xref="taxon:9031"
regulatory 455..459
/regulatory_class="CAAT_signal"
regulatory 517..524
/regulatory_class="TATA_box"
precursor_RNA 544..4766
/note="putative primary transcript"
precursor_RNA 544..4764
/note="putative primary transcript"
intron 544..1542
misc_RNA 544..544
/note="cap site"
CDS join(1543..1665,1986..2225,2750..3188,3495..3676,
4032..4175)
/product="beta-actin"
/db_xref="GOA:P60706"
/db_xref="InterPro:IPR004000"
/db_xref="InterPro:IPR004001"
/db_xref="InterPro:IPR020902"
/db_xref="PDB:3J0S"
/db_xref="UniProtKB/Swiss-Prot:P60706"
/protein_id="CAA25004.1"
/translation="MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM
VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP
VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVT
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY
VALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE
TTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE
RRYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF"
exon 1543..1665
/number=1
intron 1666..1985
/number=1
exon 1986..2225
/number=2
intron 2226..2749
/number=2
exon 2750..3188
/number=3
intron 3189..3494
/number=3
exon 3495..3676
/number=4
intron 3677..4031
/number=4
exon 4032..4172
/number=5
intron 4173..4766
/number=5
regulatory 4744..4751
/regulatory_class="polyA_signal_sequence"
polyA_site 4764..4764
polyA_site 4766..4766
BASE COUNT 939 a 1306 c 1565 g 1236 t
ORIGIN
1 caccggtgtt attgctgctc ggtgcgtgca tgcacatcag tgtcgctgca gctcagtgca
61 tgcacgctca ttgcccatcg ctatccctgc ctctcctgct ggcgctcccc gggaggtgac
121 ttcaagggga ccgcaggacc acctcggggg tggggggagg gctgcacacg cggaccccgc
181 tccccctccc caacaaagca ctgtggaatc aaaaaggggg gaggggggat ggaggggcgc
241 gtcacacccc cgccccacac cctcacctcg aggtgagccc cacgttctgc ttcactctcc
301 ccatctcccc cccctcccca cccccaattt tgtatttatt tattttttaa ttattttgtg
361 cagcgatggg ggcggggggg gggggggcgc gcgccaggcg gggcggggcg gggcgagggg
421 cggggcgggg cgaggcggag aggtgcggcg gcagccaatc agagcggcgc gctccgaaag
481 tttcctttta tggcgaggcg gcggcggcgg cggccctata aaaagcgaag cgcgcggcgg
541 gcgggagtcg ctgcgttgcc ttcgccccgt gccccgctcc gcgccgcctc gcgccgcccg
601 ccccggctct gactgaccgc gttactccca caggtgagcg ggcgggacgg cccttctcct
661 ccgggctgta attagcgctt ggtttaatga cggctcgttt cttttctgtg gctgcgtgaa
721 agccttaaag ggctccggga gggccctttg tgcggggggg agcggctcgg ggggtgcgtg
781 cgtgtgtgtg tgcgtgggga gcgccgcgtg cggcccgcgc tgcccggcgg ctgtgagcgc
841 tgcgggcgcg gcgcggggct ttgtgcgctc cgcgtgtgcg cgaggggagc gcggccgggg
901 gcggtgcccc gcggtgcggg ggggctgcga ggggaacaaa ggctgcgtgc ggggtgtgtg
961 cgtggggggg tgagcagggg gtgtgggcgc ggcggtcggg ctgtaacccc cccctgcacc
1021 cccctccccg agttgctgag cacggcccgg cttcgggtgc ggggctccgt gcggggcgtg
1081 gcgcggggct cgccgtgccg ggcggggggt ggcggcaggt gggggtgccg ggcggggcgg
1141 ggccgcctcg ggccggggag ggctcggggg aggggcgcgg cggccccgga gcgccggcgg
1201 ctgtcgaggc gcggcgagcc gcagccattg ccttttatgg taatcgtgcg agagggcgca
1261 gggacttcct ttgtcccaaa tctggcggag ccgaaatctg ggaggcgccg ccgcaccccc
1321 tctagcgggc gcgggcgaag cggtgcggcg ccggcaggaa ggaaatgggc ggggagggcc
1381 ttcgtgcgtc gccgcgccgc cgtccccttc tccatctcca gcctcggggc tgccgcaggg
1441 ggacggctgc cttcgggggg gacggggcag ggcggggttc ggcttctggc gtgtgaccgg
1501 cggggtttat atcttccctt ctctgttcct ccgcagccag ccatggatga tgatattgct
1561 gcgctcgttg ttgacaatgg ctccggtatg tgcaaggccg gtttcgccgg ggacgatgcc
1621 ccccgtgctg tgttcccatc tatcgtgggt cgccccagac atcaggtacg gcaacggctg
1681 cggtgctgca tccggacgat agggaggagc gttcggtggg agtggttctg ctgagggcag
1741 cgagcctcaa gaagcccttt tattttcata tgtgacataa ggagtttctg tcctcaacag
1801 taatgggttg agtacgcagc ctccgcggag catcctgtgt tggagcagtt gctcagtccc
1861 ttccctgaca gagtagggac agtggggggt tggtaattaa aggtgtggca cttggaaaga
1921 aaactttatt tgtccgttgg agttgatcct tcagttaaac ttaaagcttt ttctttgttg
1981 tgcagggtgt gatggttggt atgggccaga aagacagcta cgttggtgat gaagcccaga
2041 gcaaaagagg tatcctgacc ctgaagtacc ccattgaaca cggtattgtc accaactggg
2101 atgatatgga gaagatctgg caccacactt tctacaatga gctgagagta gcccctgagg
2161 agcaccctgt gctgctcaca gaggctcccc tgaaccccaa agccaacaga gagaagatga
2221 cacaggtgtg taaaactctt tgagcctaga gctacagcag gtactgctgc aggccagctt
2281 tcctcttcca tgttgtcctc tatctgcctt caccacttct ccctttttgc catctttaca
2341 gggttttcct ttcctgacct gagtctcctc tttgctggac cttgacaggt tttgtttgct
2401 ctaagctggc tttctctgag actgaactag caacttgtct aactgctgtt tctgactaga
2461 cactaatcca tttaccatct ttgagtgact ataccgtagt ttcttggcct ttgtttcgtt
2521 ccttgctgtg tcatgtggat gggcctgtgg tagcagtgtc cttgctcagg ctctgacttg
2581 acaggtgtgg gtggagacca agtgagataa gtgctcatag ctccttctag aggagcagag
2641 aagcctctta tctagggaca aatgtaaacc acatgcatgg accgatgtag gtgtgcagtg
2701 agaaccttgg tttattctgc ttgactcagt gcttttttta tctttctaga tcatgtttga
2761 gaccttcaac accccagcca tgtatgtagc catccaggct gtgctgtccc tgtatgcctc
2821 tggtcgtacc actggtattg tgatggactc tggtgatggt gttacccaca ctgtgcccat
2881 ctatgaaggc tacgccctcc cccatgccat cctccgtctg gatctggctg gccgtgacct
2941 gacggactac ctcatgaaga tcctgacaga gagaggctac agcttcacca ccacagccga
3001 gagagaaatt gtgcgtgaca tcaaggagaa gctgtgctac gtcgcactgg atttcgagca
3061 ggagatggcc acagctgcct ctagctcttc cctagagaag agctatgaac tccctgatgg
3121 tcaggtcatc accattggca atgagaggtt caggtgcccc gaggccctct tccagccatc
3181 tttcttgggt aagtctgact cctttgagga gattccatgc cccttctgcc tagagcgact
3241 tagagactgg ccacaatatt gctggccctt agcaggtctg tcccattcca ctgcagtctt
3301 ttttcttcct cagtttgagg atgattgagg tacctaggtc agtagaacag gaggctgagc
3361 ctgtcagcca tgcctttgtc tgtgttgttt cccactatgg ggtgtttgat tctcttgttt
3421 tcccatagca gtaggtcctc tgtcttcctt gtccctgaac catttactga cttgacactg
3481 ctttttgctt gcaggtatgg agtcctgtgg tatccatgaa actaccttca actccatcat
3541 gaagtgtgat gtggatatcc gtaaggatct gtatgccaac acagtgctgt ctggtggtac
3601 cacaatgtac cctggcattg ctgacaggat gcagaaggag atcacagccc tggcacctag
3661 cacaatgaaa atcaaggtag gctggagccc taggctgctc ttagcacacc tcttaatgct
3721 gagtgggtgg aggaggctga gctaaactac tacagaagat ggaaactgct ttgtcttagt
3781 ggtggagcct tatggcctcg ctctgggcag ggtggcagcc actcagccat gtgagtaatg
3841 agattaagtg ctggctgtga gttggggtgg gagggggagg gtgctgtgtg tagggctgtg
3901 ccttaagcct gctcagactc tggagtgcct tggccaaggc ctgataaagg aattaggtag
3961 cggagcgcca cagggctgcg tgtgggttgt gtaccatcac actgcatctg accagttgtt
4021 ctctcctgca gatcattgcc ccacctgagc gcaggtactc tgtctggatt ggaggctcta
4081 tcctggcctc cctgtccacc ttccagcaga tgtggatcag caagcaggag tacgatgaat
4141 ccggaccctc cattgtccac cgcaaatgct tctaaaccgg actgttacca acacccacac
4201 ccctgtgatg aaacaaaacc cataaatgcg cataaaacaa gacgagattg gcatggcttt
4261 atttgttttt tcttttggcg cttgactcag gattaaaaaa ctggaatggt gaaggtgtca
4321 gcagcagtct taaaatgaaa catgttggag cgaacgcccc caaagttcta caatgcatct
4381 gaggactttg attgtacatt tgtttctttt ttaatagtca ttccaaatat tgttataatg
4441 cattgttaca ggaagttact cgcctctgtg aaggcaacag cccagctggg aggagccggt
4501 accaattact ggtgttagat gataattgct tgtctgtaaa ttatgtaacc caacaagtgt
4561 ctttttgtat cttccgcctt aaaaacaaaa cacacttgat cctttttggt ttgtcaagca
4621 agcgggctgt gttccccagt gatagatgtg aatgaaggct ttacagtccc ccacagtcta
4681 ggagtaaagt gccagtatgt gggggaggga ggggctacct gtacactgac ttaagaccag
4741 ttcaaataaa agtgcacaca atagaggctt gactggtgtt ggtttttatt tctgtgctgc
4801 gctgcttggc cgttggtagc tgttctcatc tagccttgcc agcctgtgtg ggtcagctat
4861 ctgcatgggc tgcgtgctgg tgctgtctgg tgcagaggtt ggataaaccg tgatgatatt
4921 tcagcaagtg ggagttggct ctgattccat cctgagctgc catcagtgtg ttctgaagga
4981 agctgttgga tgagggtggg ctgagtgctg ggggacagct gggctcagtg ggactgcagc
5041 tgtgct
//