LOCUS MUSLYT2AP 769 bp mRNA linear ROD 10-MAY-1993 DEFINITION Mouse differentiation antigen Lyt-2-alpha-prime mRNA, complete cds. ACCESSION M16981 VERSION M16981.1 KEYWORDS alternative splicing; differentiation antigen; membrane glycoprotein. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 769) AUTHORS Nakauchi,H., Nolan,G.P., Hsu,C., Huang,H.S., Kavathas,P. and Herzenberg,L.A. TITLE Molecular cloning of Lyt-2, a membrane glycoprotein marking a subset of mouse T lymphocytes: molecular homology to its human counterpart, Leu-2/T8, and to immunoglobulin variable regions JOURNAL Proc. Natl. Acad. Sci. U.S.A. 82 (15), 5126-5130 (1985) PUBMED 3927298 REFERENCE 2 (sites) AUTHORS Tagawa,M., Nakauchi,H., Herzenberg,L.A. and Nolan,G.P. TITLE Formal proof that different-size Lyt-2 polypeptides arise from differential splicing and post-transcriptional regulation JOURNAL Proc. Natl. Acad. Sci. U.S.A. 83 (10), 3422-3426 (1986) PUBMED 3085089 COMMENT Original source text: Mouse (strain C57BL/6) thymocyte, cDNA to mRNA (library of H.Gershenfeld and I.Weissman). [2] sites; alternative splice sites. Printed copy of sequence for [1] kindly provided by G.P.Nolan, 03-JUL-1986. The Lyt-2-alpha and Lyt-2-alpha' proteins are produced by alternative splicing. FEATURES Location/Qualifiers source 1..769 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6" /db_xref="taxon:10090" /cell_type="thymocyte" gene 1..769 /gene="Lyt-2 alpha" CDS 13..678 /gene="Lyt-2 alpha" /note="precursor" /codon_start=1 /product="lymphocyte differentiation antigen" /protein_id="AAA39477.1" /translation="MASPLTRFLSLNLLLLGESIILGSGEAKPQAPELRIFPKKMDAE LGQKVDLVCEVLGSVSQGCSWLFQNSSSKLPQPTFVYMASSHNKITWDEKLNSSKLFS AMRDTNNKYVLTLNKFSKENEGYYFCSVISNSVMYFSSVVPVLQKVNSTTTKPVLRTP SPVHPTGTSQPQRPEDCRPRGSVKGTGLDFACDIYIWAPLAGICVALLLSLIITLICY HSR" sig_peptide 13..93 /gene="Lyt-2 alpha" mat_peptide 94..675 /gene="Lyt-2 alpha" /product="lymphocyte differentiation antigen" BASE COUNT 191 a 217 c 185 g 176 t ORIGIN 91 bp upstream of AluI site. 1 ggagagcaca ccatggcctc accgttgacc cgctttctgt cgctgaacct gctgctgctg 61 ggtgagtcga ttatcctggg gagtggagaa gctaagccac aggcacccga actccgaatc 121 tttccaaaga aaatggacgc cgaacttggt cagaaggtgg acctggtatg tgaagtgttg 181 gggtccgttt cgcaaggatg ctcttggctc ttccagaact ccagctccaa actcccccag 241 cccaccttcg tttatatggc ttcatcccac aacaagataa cgtgggacga gaagctgaat 301 tcgtcgaaac tgttttctgc catgagggac acgaataata agtacgttct caccctgaac 361 aagttcagca aggaaaacga aggctactat ttctgctcag tcatcagcaa ctcggtgatg 421 tacttcagtt ctgtcgtgcc agtccttcag aaagtgaact ctactactac caagccagtg 481 ctgcgaactc cctcacctgt gcaccctacc gggacatctc agccccagag accagaagat 541 tgtcggcccc gtggctcagt gaaggggacc ggattggact tcgcctgtga tatttacatc 601 tgggcaccct tggccggaat ctgcgtggcc cttctgctgt ccttgatcat cactctcatc 661 tgctaccaca gccgctagtc agacaggaag gcaagcccag accttcagag aaaattgtgt 721 aaaatggcac cgccaggaag ctacaactac tacatgactt cagagatct //