LOCUS KM655713 3207 bp mRNA linear HTC 29-JUL-2015
DEFINITION Danio rerio Dcc mRNA, partial cds.
ACCESSION KM655713
VERSION KM655713.1
KEYWORDS HTC.
SOURCE Danio rerio (zebrafish)
ORGANISM Danio rerio
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
Cypriniformes; Danionidae; Danioninae; Danio.
REFERENCE 1 (bases 1 to 3207)
AUTHORS Gao,X., Metzger,U., Panza,P., Mahalwar,P., Alsheimer,S., Geiger,H.,
Maischein,H.M., Levesque,M.P., Templin,M. and Sollner,C.
TITLE A Floor-Plate Extracellular Protein-Protein Interaction Screen
Identifies Draxin as a Secreted Netrin-1 Antagonist
JOURNAL Cell Rep 12 (4), 694-708 (2015)
PUBMED 26190107
REFERENCE 2 (bases 1 to 3207)
AUTHORS Gao,X., Metzger,U., Panza,P., Mahalwar,P., Alsheimer,S., Geiger,H.,
Maischein,H.M., Levesque,M.P., Templin,M. and Sollner,C.
TITLE Direct Submission
JOURNAL Submitted (23-SEP-2014) Genetics, Max Planck Institute for
Developmental Biology, Spemannstrasse 35, Tuebingen, BW 72076,
Germany
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3207
/organism="Danio rerio"
/mol_type="mRNA"
/db_xref="taxon:7955"
CDS 1..>3207
/codon_start=1
/product="Dcc"
/protein_id="AJG06059.1"
/translation="MGCVTGDIRRLSALLIGLQVLYTHGLESPRGFVDLRFVLQPQDV
VTVRGGVLQLDCDALSDQGVPSISWKKDGVLLSAVVDERRRQLSNGSLLVQNVMHSRH
HRPDEGSYQCLASLEGIGAIVSRTARVTVSGPLRVLVSTESVSAHLGDTALLRCEVTG
DPMPVVRWQKNREDLPLTFDPDSRVVILPSGSLQVSRVQPPDSATYRCLAENPGSART
GTDADLRVLPEPGVSRGLVFLQRPQKVSVLQGRDAVLECSASGFPNPAFYWLRGNELI
QSRSKKYSLLSGSNLLISSVTDDDSGIYTCIAHNKQQNISASCELAVLVPPQFLNYPS
NTYAYESSDIEMECAVTGNPQPVVRWVKNGEVVVPSDYFQIVDGGHLQILGLVRSDEG
FYQCIAENEAGNSQAMAQLILLQPVTPRSAVSPSAPRDVAPVLVSSRFVRLSWRPPEE
PRGPILTYGVFYSEEGINRERSVNVTEAESLQLTVSNLRPEASYSFRVLAYNEQGPGE
SSEAIRLSTQAELLVPGPVENLQAEAVSPTSIQASWDPPAPANGPVQSYRLLWTETSS
GKEQNVEVVGQSYRMEGLKKFTEYSLRVLAVNRHGPGVSDKDTLITTLSDVPSSPPQN
VSLEVVYSRSIKVSWQPPPANTQNGFITGYKIRYRKTGRRGEQEAIEPNNLWYLFTGL
EKGSQYSFQVSGMTVNGTGPSSEWLTAETPENDLDESQVPHQPSSLHVRPLPNSIIMS
WTPPLNPNTLIRGYTIGYGVGSPYAQTVRVDSKQRYYSIENLEPSSHYVISLKAFNNA
GEGVPLYESAVTRSMTDSSSAPMIPPVGVQAVALTSDSVRVSWADNSIPKNQKSSEVR
YYSVKWRTSHSTSGKHKSADTTALSHTVTGLKPNTMYEFSVMVTKGRKSSTWSMTAHA
TTYEAAPSSAPKDLTVIGREGRPRAILISWQPPLEANGRITGFILYYTLEKNLPIDDW
VMEPISGDRLTHQVLDLNLDTVYYFRIQAKNAKGVGPLSDPVQYRTSKVEHPDKMAND
QGRHGDGVYWPSDNNPIDMSSLNEAPIGQMRPPHGSVTP"
BASE COUNT 689 a 956 c 937 g 625 t
ORIGIN
1 atgggctgcg tcactggaga tattcgccga ctttccgcgc tcctcatcgg gctgcaggtc
61 ctctacacac acggtttgga gtctccgcgg gggtttgtgg atctgcggtt tgtgctgcag
121 ccgcaggacg tggtgacggt acggggtgga gttctgcagc tggactgcga tgcgctgtcg
181 gatcagggcg tccccagtat ctcctggaag aaagatggag ttctgttgag tgcagtagtg
241 gacgagcgca gacgtcagct ctctaatgga tccctgctag tgcagaatgt gatgcattcg
301 agacaccacc ggccggacga gggctcctac cagtgtctgg cctcgctgga gggcatcggg
361 gccatcgtca gccgcaccgc acgcgtcacc gtctccggtc ctctgcgtgt gctggtctcc
421 acagagtcag tgtctgctca tctgggggat acggctctgc tgcgctgcga ggtgacgggt
481 gaccccatgc ctgtggtgcg ctggcagaag aaccgagagg acctgccctt gacctttgac
541 cccgacagca gagtggtcat cctgccctcg gggtctctgc aggtcagccg ggtgcagccg
601 ccggattcgg ccacgtatcg atgcctggcg gagaatcctg gcagcgcccg caccggcaca
661 gatgcagacc tgcgcgtact gcccgagcct ggagtgtctc ggggtctggt gttcctccag
721 aggccgcaga aggtctctgt tctccagggc agagatgctg ttctagaatg ctccgcctcc
781 ggcttcccca atccggcttt ctattggctg agaggaaacg agctcatcca gagccgctct
841 aagaaatact ctctcctgag cggcagtaac ctgttgatca gcagcgtcac ggacgacgat
901 tcgggaatct acacctgcat cgctcacaac aaacagcaga atatctctgc gtcctgcgag
961 ctcgctgtac tggtgccgcc tcagtttctc aactacccgt caaacacata tgcgtatgaa
1021 agctcagaca ttgagatgga gtgtgcggtg actggaaacc cacaacctgt cgtccgctgg
1081 gtgaaaaacg gagaggttgt tgttcccagt gactacttcc agatcgtgga cggtggtcat
1141 ctgcagattc tgggtctggt gcgctcagat gaaggctttt atcagtgcat cgcagagaat
1201 gaagcgggga acagtcaggc catggctcaa ctcatcctgc tgcagcccgt taccccgcgc
1261 tccgccgttt ctccctccgc ccctcgtgac gtggcccccg tcctcgtgtc cagccgattc
1321 gttcgtctga gctggcggcc cccggaggag ccccgcggcc ccatactcac ctacggggtc
1381 ttctactcag aggagggcat caacagggag cggtcagtaa atgtgactga ggctgagagt
1441 ctgcagctga cggtcagtaa tctccgcccg gaggccagct actccttcag ggttctggca
1501 tacaacgagc aggggcccgg agagagctca gaggccatac ggctgtccac acaggctgag
1561 cttctagttc cgggtccggt ggagaatctc caggctgaag cggtttctcc gacctccatc
1621 caggcctcgt gggatcctcc agctccagca aacggccccg tgcagagcta ccggctgctg
1681 tggactgaga cctccagcgg gaaagagcag aatgtggagg tggtgggtca gagctacagg
1741 atggagggac tgaagaagtt cactgagtac agtttgcgag tgctggcggt gaaccgacac
1801 ggccccgggg tctcggataa agacacactc atcaccacgc tctcagacgt gccaagctct
1861 ccgccgcaga acgtctcgct ggaggtggtg tattcacgca gcattaaagt gagctggcag
1921 cctcctcctg caaacacaca gaacggcttc atcaccggat acaagatccg ttaccggaaa
1981 accggccggc ggggtgaaca agaggccatc gagcccaaca acctgtggta cctgttcacc
2041 gggctggaga agggcagtca gtacagtttc caggtttcag ggatgacggt gaacgggacg
2101 gggcccagca gcgagtggct gactgctgag acacctgaga acgacctgga cgagtctcag
2161 gtgccgcatc agcccagctc tctgcatgtg cgtccgctcc ccaacagcat catcatgagc
2221 tggacgccgc cgctgaaccc caacacactc atcagaggat acaccatcgg ctacggcgtc
2281 ggcagcccct acgctcagac cgtcagggtg gacagcaagc agagatacta ctccatagaa
2341 aaccttgagc ccagctctca ttacgtgatc tctctgaagg ccttcaataa cgcaggtgaa
2401 ggagttcctc tgtacgagag cgccgtcacc agatccatga cagactcgtc ctccgcgccc
2461 atgattcccc ctgtaggtgt gcaggcggtg gcgctgacct cagactcggt gcgcgtctcc
2521 tgggccgaca actccattcc caagaaccag aagagctccg aggtgcgcta ctactccgtc
2581 aagtggagga ccagccactc caccagcggc aaacacaagt cggctgatac gacagctctg
2641 agtcacacag tcacaggtct gaagcccaac accatgtatg agttttcagt gatggtgacc
2701 aaaggacgca aatccagcac ctggagtatg actgcacacg ctactacata tgaagcagca
2761 ccgagctccg ccccaaagga cctcactgtg attggccgag agggtcgacc acgagccatt
2821 ttgattagct ggcagccgcc actggaggcc aacggacgaa tcacagggtt tatcctctac
2881 tacacgctgg agaagaatct gccgatagat gattgggtga tggagcccat cagtggagac
2941 aggctcactc atcaggtgct ggacctcaat ctggacacag tctactattt ccgcatccag
3001 gccaaaaacg ctaaaggagt cgggccgctg tcggaccccg tgcagtacag gacctccaaa
3061 gttgagcatc cggataagat ggccaatgat caaggtcgtc atggagacgg ggtgtactgg
3121 ccctctgata ataaccccat tgacatgagc agcctgaacg aggctccaat cgggcagatg
3181 cgtccccctc acggcagcgt gaccccg
//