LOCUS KM655666 1359 bp mRNA linear HTC 29-JUL-2015
DEFINITION Danio rerio Ltk mRNA, partial cds.
ACCESSION KM655666
VERSION KM655666.1
KEYWORDS HTC.
SOURCE Danio rerio (zebrafish)
ORGANISM Danio rerio
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
Cypriniformes; Danionidae; Danioninae; Danio.
REFERENCE 1 (bases 1 to 1359)
AUTHORS Gao,X., Metzger,U., Panza,P., Mahalwar,P., Alsheimer,S., Geiger,H.,
Maischein,H.M., Levesque,M.P., Templin,M. and Sollner,C.
TITLE A Floor-Plate Extracellular Protein-Protein Interaction Screen
Identifies Draxin as a Secreted Netrin-1 Antagonist
JOURNAL Cell Rep 12 (4), 694-708 (2015)
PUBMED 26190107
REFERENCE 2 (bases 1 to 1359)
AUTHORS Gao,X., Metzger,U., Panza,P., Mahalwar,P., Alsheimer,S., Geiger,H.,
Maischein,H.M., Levesque,M.P., Templin,M. and Sollner,C.
TITLE Direct Submission
JOURNAL Submitted (23-SEP-2014) Genetics, Max Planck Institute for
Developmental Biology, Spemannstrasse 35, Tuebingen, BW 72076,
Germany
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1359
/organism="Danio rerio"
/mol_type="mRNA"
/db_xref="taxon:7955"
CDS 1..>1359
/codon_start=1
/product="Ltk"
/protein_id="AJG06012.1"
/translation="MDYITRQTFVKLALFIFTVVRSSCALLEKAAESPVHPNPLQSSP
AEDSDVSFCDFESPCSWTLSSHSTGGEWFITSAQQHRSNRRDTQPIRDYSTGKSEGHF
LLLKPSSSHLSAARCSFHMTSPVVLSSGPFCHLQLARFQPEPHAGNISAFVKHTDSID
IKPIDLTIKEQESDSSQWEVLKAVIGQLNEPFQVTVQYSACSSHEVGFLAFDSLELKN
CVMGDDYVDLGSDCEKYSSLQCHSGGCIEKQRVCDFHTDCPEGEDEGLICSTLPLGSY
CSFELGSCGWSAADTQSSWRLVSGQQLIEDTHLLGTTLKNTQGHFLFLKVRGHGDERE
ALVQSPALPSTISNQDCQLQFSLYRYGDFNGTVLLSVVESGASAPALIWERSGHWKDA
WQEITLPITEILNGFHLKVQAFWTSGSKADIALDDISLSAACFDTELNELLHEGLPHD
LDF"
BASE COUNT 348 a 316 c 330 g 365 t
ORIGIN
1 atggattata ttactcgaca aacttttgta aaacttgccc ttttcatctt cacagttgtg
61 aggagcagtt gtgctctgtt ggaaaaagct gcagaaagcc cagtgcatcc aaatcctctt
121 caatccagtc cagcagaaga cagcgatgtt tcgttctgtg atttcgagtc tccgtgttct
181 tggacattat ccagtcacag cactggagga gagtggttta tcacttcagc acagcagcac
241 agatctaaca gacgcgacac ccagcctatc agagattact ccactggaaa atctgaagga
301 cattttctgc tgctgaagcc cagctccagt catctgtctg cagccagatg tagtttccac
361 atgaccagtc ctgtagttct cagcagtggg ccattttgtc atctccaact cgctcgcttt
421 caaccagagc cacacgctgg aaacatatca gccttcgtga agcacaccga ctctatcgac
481 atcaaaccca ttgaccttac aatcaaagaa caagaaagcg acagctcgca gtgggaggtc
541 ttgaaggctg tgattggtca gttgaatgag cccttccagg tgacagtgca gtactctgcc
601 tgtagcagtc atgaagttgg gtttctggca ttcgattcac tggagctgaa gaactgtgtc
661 atgggtgatg attatgtgga tttgggttcc gactgtgaga aatactcatc tcttcaatgt
721 cattctggag gttgcattga gaaacaaaga gtgtgtgatt tccacactga ctgcccagaa
781 ggggaggacg agggcttaat atgcagcact ttacctttgg gttcatactg ttcatttgag
841 ttgggctcct gtggttggtc agcggctgac acacagtctt cttggagact agttagtgga
901 caacagctga ttgaagacac acacctgctg ggcacaactc tgaagaacac tcaagggcat
961 ttccttttct tgaaggtcag aggtcacggt gatgaaagag aggcgctggt tcaaagccct
1021 gcattgcctt caactatatc caatcaggac tgtcagttgc agttttctct ctaccggtat
1081 ggggatttca atggaacagt gcttttgtct gtggtggaga gcggagcctc agcaccagca
1141 ctgatttggg agagatccgg acactggaaa gacgcctggc aagagatcac tctgccgatc
1201 acagagattt taaatggctt ccatcttaaa gtgcaggctt tctggacttc tggctccaag
1261 gctgacattg cactcgatga catttcatta agtgcagcat gttttgacac agaactgaat
1321 gaactgcttc atgaaggact accgcatgat ttagacttc
//