LOCUS KM655641 2583 bp mRNA linear HTC 29-JUL-2015
DEFINITION Danio rerio Mxra5 mRNA, partial cds.
ACCESSION KM655641
VERSION KM655641.1
KEYWORDS HTC.
SOURCE Danio rerio (zebrafish)
ORGANISM Danio rerio
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
Cypriniformes; Danionidae; Danioninae; Danio.
REFERENCE 1 (bases 1 to 2583)
AUTHORS Gao,X., Metzger,U., Panza,P., Mahalwar,P., Alsheimer,S., Geiger,H.,
Maischein,H.M., Levesque,M.P., Templin,M. and Sollner,C.
TITLE A Floor-Plate Extracellular Protein-Protein Interaction Screen
Identifies Draxin as a Secreted Netrin-1 Antagonist
JOURNAL Cell Rep 12 (4), 694-708 (2015)
PUBMED 26190107
REFERENCE 2 (bases 1 to 2583)
AUTHORS Gao,X., Metzger,U., Panza,P., Mahalwar,P., Alsheimer,S., Geiger,H.,
Maischein,H.M., Levesque,M.P., Templin,M. and Sollner,C.
TITLE Direct Submission
JOURNAL Submitted (23-SEP-2014) Genetics, Max Planck Institute for
Developmental Biology, Spemannstrasse 35, Tuebingen, BW 72076,
Germany
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2583
/organism="Danio rerio"
/mol_type="mRNA"
/db_xref="taxon:7955"
CDS 1..>2583
/codon_start=1
/product="Mxra5"
/protein_id="AJG05987.1"
/translation="MAPVGVPALLMLPALGLLLILPSCLYACPRSCSCPSPKEVHCTF
RHLPSAPRNLPQDTERLNLGYNSIGAVGSSDFVNLRKLEMLMLHGNDISSVSSGSFYH
LRSLQILKLSYNKLKRVDPSLFEGLTSLVRLHLDHNLIDFIEPFSFNGLTSLKLLQLE
GNRLQDLHSHTFITVSVLGTFWSSGLRHLHLADNQLEYLLPGTLQHLNRLEVLSLHGN
PWACDCHLHWLLEWNKNHDGVIKCKKDRDTGDAGNCAACASPLPLNNSQILQLSTNQL
TCDQPSLQSPLKIGESSMGEDQEPDTPYIKDLEHPLGHLTFILSDSHGNRAHVACNVT
RPVEGTTIVWEPVRKTDEIAVNVTLRTLLECEIDRDALQNLWRLIAYYYESPAILERG
TSLGNSSKVTFQYSQATSEESPYFTELKGHLMAEPAWLLQPRVTLQLNRRKTTTKKLV
LNFSTFISKQLIGRGGEEDVTSSWAMIQRGAPGRIQSVLEHYEVSLDCSVLSSGHYPV
EWMLPDLTPIDQTDSHNLRLENHRLVIKNTSIADSGLYHCFVRTDTNVDIVSYRLTVR
MRLLSPSDLNGKKISVEKGDTLNLPCLVTSPHPIETKWYLPNNQILKASERKGNVQVS
QNNTLIIKTVTHEDAGEYSCLAANLYGADMLSHLIVVTGEKEETQRGVLVSKGEVPLF
ESEGSEGSGYEEIKRPTAKLTPQKTDGKHRGGIIRQNTKGKKVKEGVRKPNNSVKELD
PSRWEQIVAKANAKLSTVLPVTIHLENVITTTTISSSAIQTTKTDVTASGASTTSSLQ
RFNVKQLETAPHSEHVKQETTHGEESKQKIDGYNNSDLTTAVPEHETQLVKQVDRHTI
EEKIR"
BASE COUNT 787 a 590 c 578 g 628 t
ORIGIN
1 atggctccag tgggtgtacc tgctctcctg atgttgccag ctctgggtct gctgctcatc
61 ttgccctcat gcctctatgc atgtccgagg tcctgcagtt gcccaagccc caaagaggtg
121 cactgtacct ttcgtcacct tccctctgcc ccacgaaacc taccgcagga cacagagaga
181 ctcaacctag gctataacag cattggggca gttgggtctt cagattttgt caacctacgg
241 aaattggaaa tgcttatgct tcatggaaat gatatatcct ctgtttcttc tggatccttt
301 taccacctcc ggtccctgca gatcctcaag ttgagctaca acaaactgaa aagagttgac
361 cccagcttat ttgagggctt gactagcctc gtacggcttc atttagacca caatctcatt
421 gacttcattg agcccttttc atttaatgga ctcacatcat taaagctatt gcaactggag
481 gggaaccgac tgcaggacct ccattctcac acatttatta cagtctcagt tctgggaaca
541 ttttggagct caggactgcg gcacctgcac ttggcagaca atcagctaga atacttactg
601 cctggaactc tgcagcactt aaacaggctg gaagtcctct ccctgcatgg aaacccctgg
661 gcttgtgatt gccacttaca ttggctcttg gagtggaaca agaatcatga tggagttatt
721 aagtgcaaaa aagatcgtga tactggtgat gctggcaact gtgctgcatg tgcctcacca
781 ctgcctttaa acaacagcca gatcttgcag ctttcgacca atcagcttac ctgtgaccaa
841 ccctccctgc agtccccttt aaaaattgga gagagtagca tgggggaaga tcaggagcca
901 gataccccct acatcaaaga cctggagcat cctcttggcc acctgacctt cattctttct
961 gacagccatg ggaatcgggc gcatgtggct tgtaatgtaa cacgtcccgt tgaaggcacc
1021 accattgtgt gggaaccagt gaggaaaaca gatgagattg ctgtaaatgt aactttaaga
1081 acactgctgg agtgtgagat cgatagagat gctcttcaga acctgtggag gttgattgct
1141 tattactacg aaagtccagc cattttggaa aggggaacca gtcttgggaa ttcttccaag
1201 gtgacttttc agtactctca agccacaagt gaggaatccc catatttcac tgaactcaaa
1261 ggacacttga tggctgaacc agcctggcta ttgcaaccaa gggtcactct tcagttgaac
1321 aggcgcaaaa ctacaactaa gaaactggtg ctgaacttct ccacttttat atcaaaacaa
1381 ctcattggaa gagggggtga ggaggatgta acctcatcct gggctatgat ccaaagagga
1441 gccccaggga gaatccagtc agttctagaa cattatgagg ttagtctgga ttgtagcgtg
1501 ctcagctcag ggcattaccc tgtggagtgg atgcttccag acttaacacc gatcgatcaa
1561 actgattctc ataatttaag gttggagaat cacaggctag taatcaaaaa cacaagtata
1621 gcagactctg gactttatca ttgctttgtg aggactgaca ctaatgtgga catagtctcc
1681 tataggctga cagtcaggat gcgccttttg agtcccagtg atttaaatgg aaaaaagata
1741 tctgtggaaa aaggggacac tcttaatctt ccctgcttag taacatctcc tcatccaatt
1801 gagacaaaat ggtacctacc aaacaatcag attctcaaag catcagagag aaaaggaaat
1861 gtacaagtat cacagaacaa cacgttgata atcaaaacag tgacacacga ggatgctgga
1921 gagtacagct gtttagcagc taacctgtat ggagctgata tgttgtctca tctaattgtt
1981 gttactggtg aaaaagaaga aacacaaaga ggtgttctgg tttccaaggg cgaagtacca
2041 ctttttgaaa gtgagggaag tgaagggtca ggttatgaag aaatcaaacg accaacagct
2101 aagctcacac ctcaaaagac tgatggaaaa cacaggggtg gcatcatccg acaaaataca
2161 aaagggaaga aagtcaagga aggtgtaaga aaaccaaata actctgtcaa ggagcttgac
2221 cctagtcgct gggagcagat tgttgcaaaa gctaatgcta aactgtcaac tgttctgcca
2281 gttacaatac atctagaaaa tgtaataaca acaaccacca tctcttcgtc agccattcaa
2341 actactaaaa cagatgttac tgctagtggt gccagtacaa cttcaagcct acaacgtttc
2401 aatgtgaaac agctggaaac ggcaccccac agtgagcatg taaaacaaga aactacacat
2461 ggagaggaat caaaacagaa aatagatggt tacaacaatt cagatttgac aacagcagtg
2521 cctgaacatg agacacagct ggtgaaacag gtagacagac acacaataga agagaaaata
2581 agg
//