LOCUS KM655614 2799 bp mRNA linear HTC 29-JUL-2015
DEFINITION Danio rerio Met mRNA, partial cds.
ACCESSION KM655614
VERSION KM655614.1
KEYWORDS HTC.
SOURCE Danio rerio (zebrafish)
ORGANISM Danio rerio
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
Cypriniformes; Danionidae; Danioninae; Danio.
REFERENCE 1 (bases 1 to 2799)
AUTHORS Gao,X., Metzger,U., Panza,P., Mahalwar,P., Alsheimer,S., Geiger,H.,
Maischein,H.M., Levesque,M.P., Templin,M. and Sollner,C.
TITLE A Floor-Plate Extracellular Protein-Protein Interaction Screen
Identifies Draxin as a Secreted Netrin-1 Antagonist
JOURNAL Cell Rep 12 (4), 694-708 (2015)
PUBMED 26190107
REFERENCE 2 (bases 1 to 2799)
AUTHORS Gao,X., Metzger,U., Panza,P., Mahalwar,P., Alsheimer,S., Geiger,H.,
Maischein,H.M., Levesque,M.P., Templin,M. and Sollner,C.
TITLE Direct Submission
JOURNAL Submitted (23-SEP-2014) Genetics, Max Planck Institute for
Developmental Biology, Spemannstrasse 35, Tuebingen, BW 72076,
Germany
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2799
/organism="Danio rerio"
/mol_type="mRNA"
/db_xref="taxon:7955"
CDS 1..>2799
/codon_start=1
/product="Met"
/protein_id="AJG05960.1"
/translation="MAIHYSEAASILIILQSLWWGLNCQCEEPIESSKLDLSVTYDLP
YFVSDTPIQKLLEINGTVYVGAVNRLYALSKDLKKKHEYKTGPVHEGPDCKTPTDQCS
GCENKPRNINNTNMALLMETFYDLELFSCGSVGNGVCSRHVLEDGPLGAEVTCMYTKK
NEGSSHGCPDCLAGPAGTQILNIMSGRVVRFFVANSEPLESNGPRLHHTISIRKMRET
QDGFEFFSEQSYMDLAPSLRGNYPLHYVYSFQSGPYVYFLTVQREGGNSKAFHTRIVR
MCSSDSEILRYVEMPFECIYSERRRKKRSAQVVFNVLQAAHVAKVGYDFQQEMGLKEG
EDVLFAAFARSKPDSPEPTASSAVCLISITDINEFFKVFIQKGYTRKLHHFPGSEEKT
FNQTFVGDSFSCGKHERGYRLEVTSTNPRRDYFHGRFRNVLLTSIAVVPIQNHTVVSL
GTAEGRVIQVVVSRFGKTEPHVDFRLDTLPVSSEMALLSPQHHNGSLLLITGNKVSKL
PVIGPGCEQLWTCSSCLLAPGFMGCGWCRTSNLCTRAPRCPQSQWIQDSCPLLITSIS
PSSAPLRGQTNITICGKNFGFNKKDRFDTKLVDVVVAGTKCKLERKDSNNNRLVCGLN
HVNWSSVDSVVTVRSGKEQAQKDGFSFVNPVIIEIFPEFGPQSGGTMLTISGSFLDSG
NVQTVTVGNATCVLQSVSATMLTCRTPPQPSPSQHKVQLHIDGVIFEAPVSYTYNKNP
HISSVQPKHSFISGGSTVTVNGFYLHSALQPQMVLTAATEGKLFQVTCSHDEDKRNIL
CITPSLKGLSVQPPVATKMTFVLDGFSTDQYDLLYVEDPKFEEFQKPTVTPRGKKNIL
EIKVPPVNQEAVKNGEVLRVSNRTCESVTLVGNTLECTVPMELQTAAKELEVEWKQAT
SSVILGRVILAQDQDYRIL"
BASE COUNT 707 a 725 c 691 g 676 t
ORIGIN
1 atggcaattc actattctga agctgcttcc atcctaatca tccttcagtc gctgtggtgg
61 ggcttgaatt gtcaatgtga ggaaccaata gaaagctcca aactcgacct ctcagtgacc
121 tatgacctcc cttactttgt gtctgacacc cccattcaga agctgttgga aatcaatgga
181 acagtgtatg tcggtgcggt caatagactt tacgctctgt cgaaagacct gaagaagaaa
241 catgagtata agactggacc ggtccacgag ggtccagact gcaagacccc aacagatcaa
301 tgcagtggtt gcgaaaacaa gccccgtaac ataaacaaca ccaatatggc cctgttaatg
361 gagacgttct atgacctgga actcttcagc tgtggctcag tcggaaatgg cgtctgcagt
421 cgtcatgtgt tagaggatgg gcctctgggt gcggaagtaa cttgcatgta caccaaaaag
481 aatgaaggca gcagccacgg atgcccagac tgcctggctg gacctgcggg cactcagatc
541 ctcaacataa tgagcggtcg tgttgtgagg ttcttcgttg cgaactctga acctcttgag
601 tcaaacggtc cacgtctcca ccacactatt tccattagga agatgcgtga aactcaagat
661 ggctttgagt tcttttccga gcagtcctac atggatttgg ccccttcact gcgggggaac
721 tatccactac attatgtcta ctctttccag agtggtcctt atgtatattt tctcaccgtc
781 caacgcgaag gtggcaactc gaaagctttc cacacgagaa tcgtacgcat gtgttcttca
841 gattctgaga tcctgcgtta tgtagaaatg ccctttgagt gcatttactc tgagcgaagg
901 agaaaaaagc gttcggctca agtggttttc aacgttctcc aggctgctca tgtggccaaa
961 gttggctatg actttcagca ggagatgggc ttgaaagaag gagaggacgt gctgtttgct
1021 gcctttgccc ggagcaaacc ggactcacca gagcccaccg ccagctccgc cgtttgcctt
1081 atctccatca cggacatcaa tgaattcttc aaggttttca ttcagaaggg ttacacaagg
1141 aaactccatc actttccagg atctgaagag aaaaccttca accagacgtt tgtaggagat
1201 tccttcagct gtgggaaaca tgaaagaggc tatcggctag aagttacaag caccaacccg
1261 cgccgggact attttcatgg ccgcttccgg aatgttcttc tcacttccat agctgtggtg
1321 ccgatccaaa accacactgt ggtcagcctt ggcacagctg agggccgcgt catccaggtg
1381 gtggtttccc gctttggcaa gacagagcca catgtggact tccgcttgga cacgctcccc
1441 gtgtcttcag aaatggccct gctgtctcca cagcatcaca acggctcctt attgttgata
1501 acaggaaaca aggtctcaaa gcttcctgtg atcgggcctg gatgtgagca gttgtggact
1561 tgtagctcgt gtcttcttgc tccgggcttc atgggctgtg gatggtgcag gaccagcaac
1621 ctgtgcacca gggcccctcg atgcccccag tcccaatgga tccaggactc ctgccccctc
1681 ctcatcacct cgatctctcc ttcctccgct ccactcagag gtcaaaccaa tatcacaatc
1741 tgtggcaaaa actttggctt taacaaaaaa gacagatttg ataccaaact tgtagatgtg
1801 gtggttgctg gaacgaagtg taaattggaa aggaaggaca gtaacaataa tcggttggtc
1861 tgtggactga atcatgtgaa ctggtccagc gtggactctg tggtcacagt gcgcagtggc
1921 aaggaacagg cccagaaaga tggcttctca tttgtgaatc cagttatcat agagatcttc
1981 ccagagtttg gacctcagtc tggcgggaca atgctcacta tcagcggttc attcttggac
2041 agtggaaatg tgcaaacagt cacagtgggg aacgctacct gtgtgttgca gagtgtttca
2101 gccacaatgt taacatgtcg tacaccacct cagccctcgc catcccaaca caaggtacag
2161 ctgcacattg atggagtaat atttgaagcg cctgtcagct acacctacaa caagaaccca
2221 cacatctcca gcgtccagcc caaacattct ttcatcagtg gaggaagcac ggtgacagtg
2281 aatggcttct acctgcactc agctcttcag cctcagatgg ttctcactgc cgccactgag
2341 ggcaaactct tccaagtgac ctgcagtcat gatgaggata agagaaatat cctttgcatc
2401 acgccctccc tgaaaggcct cagcgttcag cctccggtcg ccactaaaat gaccttcgtc
2461 ctggatggtt tttccactga tcagtacgac ctgctgtacg tggaagatcc caaatttgag
2521 gagtttcaga agcccactgt cacaccaagg ggcaaaaaga acattctgga gattaaggtc
2581 ccccctgtga atcaagaggc ggtgaaaaac ggtgaggtgc tgagagtttc aaatcggacc
2641 tgcgagagtg tcactttggt gggcaacacg ctcgaatgca ccgtacccat ggagctccag
2701 accgccgcca aagagctgga ggtggagtgg aagcaggcca catcatctgt gatcttgggc
2761 cgtgtgattt tggctcaaga ccaggattac aggatactg
//