LOCUS KM655584 1809 bp mRNA linear HTC 29-JUL-2015
DEFINITION Danio rerio Ntn1a mRNA, partial cds.
ACCESSION KM655584
VERSION KM655584.1
KEYWORDS HTC.
SOURCE Danio rerio (zebrafish)
ORGANISM Danio rerio
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
Cypriniformes; Danionidae; Danioninae; Danio.
REFERENCE 1 (bases 1 to 1809)
AUTHORS Gao,X., Metzger,U., Panza,P., Mahalwar,P., Alsheimer,S., Geiger,H.,
Maischein,H.M., Levesque,M.P., Templin,M. and Sollner,C.
TITLE A Floor-Plate Extracellular Protein-Protein Interaction Screen
Identifies Draxin as a Secreted Netrin-1 Antagonist
JOURNAL Cell Rep 12 (4), 694-708 (2015)
PUBMED 26190107
REFERENCE 2 (bases 1 to 1809)
AUTHORS Gao,X., Metzger,U., Panza,P., Mahalwar,P., Alsheimer,S., Geiger,H.,
Maischein,H.M., Levesque,M.P., Templin,M. and Sollner,C.
TITLE Direct Submission
JOURNAL Submitted (23-SEP-2014) Genetics, Max Planck Institute for
Developmental Biology, Spemannstrasse 35, Tuebingen, BW 72076,
Germany
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1809
/organism="Danio rerio"
/mol_type="mRNA"
/db_xref="taxon:7955"
CDS 1..>1809
/codon_start=1
/product="Ntn1a"
/protein_id="AJG05930.1"
/translation="MVRVSDALVTLVTLCCVLKGTVGGYGMSMFAAQTSPPDPCYDEN
GHPRRCIPDFVNAAFGKEVRASSTCGKTPSRYCVVTEKGDERHRNCHTCDASDPKKNH
PPAYLTDLNNPHNLTCWQSDNYLQYPQNVTLTLSLGKKFEVTYVSLQFCSPRPESMAI
FKSMDYGKSWVPFQYYSTQCRKMYNKPSKATITKQNEQEAICTDSHTDMHPLSGGLIA
FSTLDGRPSAHDFDNSPVLQDWVTATDIKVTFSRLHTFGDENEDDSELARDSYFYAVS
DLQVGGRCKCNGHASRCVKDRDGNLVCECKHNTAGPECDRCKPFHYDRPWQRATAREA
NECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMSK
PISHRKACKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRCANGYQQSRSPIAPC
IKIPIAPPTTTASSTEEPSDCESYCKASKGKLKINMKKYCKKDYAVQVHILKADKAGE
WWKFTVNIISVYKQGESRIRRGDQFLWVRAKDVACKCPKIKSGKKYLLLGNDEDSPGQ
SGMVADKGSLVIQWRDTWARRLRKFQQREKKGKCKKA"
BASE COUNT 502 a 490 c 472 g 345 t
ORIGIN
1 atggtgagag tctctgatgc tttggtcact ttggtgactc tctgctgtgt gctcaaaggg
61 actgtcggcg gatatggaat gagcatgttc gccgctcaga cctccccgcc ggatccgtgt
121 tacgacgaga acggacaccc cagaagatgc atccccgact tcgtaaacgc ggcgttcggg
181 aaagaagtac gcgcgtccag cacctgcggc aaaacgccga gtcgttactg cgtggtgacc
241 gagaaagggg acgaaagaca cagaaactgc cacacgtgcg acgcgtcaga cccaaagaag
301 aatcacccac cagcttacct gaccgacctg aacaatcctc acaatctcac ctgctggcag
361 tcggacaatt acctccagta tcctcaaaac gtcactttaa ctttatcctt gggcaagaaa
421 tttgaggtga cctacgtgag tttgcagttc tgctcacctc gaccggagtc tatggcgatc
481 tttaaatcga tggactacgg aaagtcctgg gtgcctttcc agtactactc gacccagtgt
541 agaaagatgt acaacaagcc cagcaaagcc acgattacta agcagaacga gcaagaggcc
601 atctgcacag attctcacac cgacatgcat cctctctccg gcgggctgat cgcgttcagc
661 accctggacg ggcgaccctc cgcgcacgac tttgacaatt cacccgtact tcaggactgg
721 gtgaccgcca ctgacattaa ggtgactttc agccgcctgc acactttcgg agacgaaaac
781 gaggatgact cggagctggc cagagattcc tatttttacg cagtttccga cctgcaggtt
841 ggaggcagat gtaagtgtaa tggacacgca tcacggtgcg tcaaagaccg ggatggaaac
901 ctagtgtgcg agtgcaagca caacacagcc ggaccagagt gtgacagatg caaacctttt
961 cactatgacc gaccctggca gcgcgcaacc gccagagaag ccaacgaatg tgtcgcctgc
1021 aattgtaacc ttcatgcgag gcgctgtcgt ttcaacatgg agctttacaa actctctgga
1081 aggaaaagtg gaggagtctg tctgaactgc cgccacaata cagctggtcg ccactgccac
1141 tactgcaaag agggctacta tagagacatg tccaagccca tctcccacag aaaggcctgc
1201 aaagcctgtg attgccatcc tgtgggggcc gcgggcaaaa cctgtaacca aaccacaggc
1261 caatgcccct gtaaagacgg tgtgacgggt atcacatgca accgttgtgc taacggctac
1321 cagcagagcc gatcacccat tgccccctgc ataaaaattc ccatcgctcc gccaaccacc
1381 actgcaagca gcacagaaga gccatcagac tgtgaatcct actgcaaggc atccaaaggc
1441 aagctgaaga tcaatatgaa gaagtactgc aagaaagatt atgccgttca agtccacatc
1501 ctgaaagcag ataaagcagg agagtggtgg aagttcaccg tcaacatcat ctctgtttac
1561 aaacagggtg aaagccgaat tcgcagagga gaccagttcc tctgggtcag ggcaaaggat
1621 gtggcctgca agtgtccgaa gatcaagtcc ggcaagaaat accttctgct ggggaacgac
1681 gaggattcgc caggacaaag cggaatggtg gcggacaagg gcagtctggt cattcagtgg
1741 agagacactt gggctcggag actccggaag tttcagcaaa gggagaagaa aggaaaatgc
1801 aagaaagca
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