LOCUS KM655578 1629 bp mRNA linear HTC 29-JUL-2015
DEFINITION Danio rerio Ephb4a mRNA, partial cds.
ACCESSION KM655578
VERSION KM655578.1
KEYWORDS HTC.
SOURCE Danio rerio (zebrafish)
ORGANISM Danio rerio
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
Cypriniformes; Danionidae; Danioninae; Danio.
REFERENCE 1 (bases 1 to 1629)
AUTHORS Gao,X., Metzger,U., Panza,P., Mahalwar,P., Alsheimer,S., Geiger,H.,
Maischein,H.M., Levesque,M.P., Templin,M. and Sollner,C.
TITLE A Floor-Plate Extracellular Protein-Protein Interaction Screen
Identifies Draxin as a Secreted Netrin-1 Antagonist
JOURNAL Cell Rep 12 (4), 694-708 (2015)
PUBMED 26190107
REFERENCE 2 (bases 1 to 1629)
AUTHORS Gao,X., Metzger,U., Panza,P., Mahalwar,P., Alsheimer,S., Geiger,H.,
Maischein,H.M., Levesque,M.P., Templin,M. and Sollner,C.
TITLE Direct Submission
JOURNAL Submitted (23-SEP-2014) Genetics, Max Planck Institute for
Developmental Biology, Spemannstrasse 35, Tuebingen, BW 72076,
Germany
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1629
/organism="Danio rerio"
/mol_type="mRNA"
/db_xref="taxon:7955"
CDS 1..>1629
/codon_start=1
/product="Ephb4a"
/protein_id="AJG05924.1"
/translation="MELFSRNVAAFWIILLEFLLGSVAEEEVLMNTKTETSDLKWTTH
SRSKPEWEEVSGLDEENNSVRTYQICQADGSSSHWLRSKLIERRGASQVYVELFFTMV
ECSSRNTHHRSCKETFNLYYYQSDTDDATATHPAWMENPYTKVDTVAADFLLRKGGEK
KVNVKTLRLGPLSKRGFYLAFQAQGACMALLSVRVFFKKCPALTRSLSVFPETVPRSL
VQEAVGQCVANAAQPGPSPRPPKMFCGEDGQWVDQPTTTCTCLPGFEASHGELECRAC
PVGLFKMGSGTGPCSVCPENSQTGETGSAACVCRSGFYRALSDSADTPCTRPPSSPRS
PVPQVNDTSLTLEWSEPLDSGGRSDLSYSVECRMCSTPGSPCTLCSDGVNYRPSQTGI
QGRRVSIWGLRPHTTYSFTVMALNGVSAQSQQGPAGETINITTSPNVPVSVSGLRKST
ATESSLTLYWNTPTQSHYRILQYQIRYCEKERGSEENSCHYMESNNNEVVLSDLRRAT
QYEVQVRARTFAGYGSFGKAILFRTLPDEDDSSSP"
BASE COUNT 356 a 459 c 479 g 335 t
ORIGIN
1 atggagctct tctccaggaa tgtggccgcg ttttggatta tcctgctgga gttcctgctc
61 ggatcagtgg cggaggaaga agtcctgatg aacacgaaaa cggagacatc agatctgaag
121 tggacgacac actctcgctc taaacctgag tgggaggagg tcagtggtct ggatgaggag
181 aacaacagtg tgcggaccta tcagatctgc caggcggacg gctccagcag tcattggctg
241 cgcagtaagc tgatcgagcg gcgaggggcg tcacaggtgt acgtggagct gttcttcact
301 atggttgagt gttcatctcg aaacacacac caccgctcct gcaaagagac tttcaacctt
361 tattactacc aaagcgacac ggatgacgcc acagccaccc acccggcgtg gatggagaac
421 ccctacacca aggtggacac agtggccgca gacttcctac tgcgcaaagg cggagagaag
481 aaagtcaacg tgaagacgct gcgtttgggc ccgttgagca agcgtggatt ctacctggcg
541 tttcaggctc agggcgcgtg catggctctg ctctccgtgc gtgttttctt caagaagtgt
601 ccggcgctca cgcgctcact atccgtcttc ccggagaccg ttccccgctc gctggtccag
661 gaggcagtgg gccagtgtgt ggccaacgca gcacagcctg gccccagtcc cagaccgccc
721 aagatgttct gcggagaaga tggacagtgg gtggaccagc ccaccaccac ctgcacttgc
781 ctgccgggct tcgaggccag ccatggagag ctggagtgta gagcgtgtcc tgtgggtctg
841 ttcaagatgg gttctggtac cggtccgtgt tctgtgtgtc ctgagaacag tcagacggga
901 gagacgggtt ctgctgcatg tgtgtgccgc tctgggtttt atcgcgctct gagtgacagt
961 gcagatacac cctgcacacg tcctccgtcg tctccgcgca gccccgtccc gcaagtaaac
1021 gacacatctc tgactctgga gtggagcgag ccgttggaca gcggcggccg ctcggatctc
1081 agctacagcg tggagtgtag gatgtgctcc acccctggaa gtccctgcac actatgcagt
1141 gacggtgtga attatcggcc gtcccaaaca gggatccaag gccggcgcgt gagcatttgg
1201 ggtctgagac ctcacaccac ctacagcttc actgtcatgg ccctcaacgg ggtctccgct
1261 cagagtcagc aggggcctgc aggagagacc atcaacatca ccaccagtcc caatgttcct
1321 gtgtcggttt cgggcttgag gaagagcaca gccactgaat ccagcctgac gctgtactgg
1381 aacacaccca cccagtcaca ctacaggatc ctgcagtacc agatacgcta ctgcgagaag
1441 gagcgcggat ctgaagaaaa ctcctgtcat tatatggaga gcaataacaa cgaggtggtt
1501 ttgagcgact tgcgaagggc cacgcagtat gaggttcaag tccgagctcg gacattcgcc
1561 ggatatggaa gctttggtaa agccatcctc tttcgaactc tacctgacga agatgattcc
1621 tcgtctccg
//