LOCUS       MUSMHIAAU                868 bp    mRNA    linear   ROD 27-APR-1993
DEFINITION  Mouse MHC class II H2-IA-alpha gene (u haplotype), mRNA.
ACCESSION   K01926
VERSION     K01926.1
KEYWORDS    antigen; cell surface glycoprotein; class II gene; glycoprotein;
            histocompatibility antigen; integral membrane protein; major
            histocompatibility complex.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 868)
  AUTHORS   Benoist,C.O., Mathis,D.J., Kanter,M.R., Williams,V.E. II and
            McDevitt,H.O.
  TITLE     Regions of allelic hypervariability in the murine A alpha immune
            response gene
  JOURNAL   Cell 34 (1), 169-177 (1983)
   PUBMED   6309407
COMMENT     Original source text: Mouse B10.PL (u haplotype) spleen, cDNA to
            mRNA.
            The protein domains are as follows: first external protein domain
            (D1) at bases <1-246; second external protein domain (D2) at bases
            247-528; connecting peptide, transmembrane region, and cytoplasmic
            tail (CP,TM,C) at bases 529-681. [1] also sequenced the IA-alpha
            genes from mice of d,b,f and q haplotypes.
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
     mRNA            <1..>868
                     /product="IA-alpha mRNA"
     CDS             <1..684
                     /note="MHC H2-IA-alpha"
                     /codon_start=1
                     /protein_id="AAA39623.1"
                     /translation="DHVGSYGIVVYQSPGDIGQYTFEFDGDELFYVDLDKKETIWMLP
                     EFAQLRSFDPQGGLQNIATGKHNLGVLTKRSNSTPATNEAPQATVFPKSPVLLGQPNT
                     LICFVDNIFPPVINITWLRNSKSVADGVYETSFFVNRDYSFHKLSYLTFIPSDDDIYD
                     CKVEHWGLEEPVLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIFIIQGLRSG
                     GTSRHPGPL"
BASE COUNT          192 a          230 c          213 g          233 t
ORIGIN      53 bp upstream of HaeIII site, chromosome 17.
        1 gaccatgtag gctcctatgg tatagttgta tatcagtctc ctggagacat tggccagtac
       61 acatttgaat ttgatggtga tgagttgttc tatgtggact tggataagaa ggagactatc
      121 tggatgcttc ctgagtttgc tcaactgaga agctttgacc cccaaggtgg actgcaaaac
      181 atagctacag gaaaacacaa cttgggagtc ttgactaaga ggtcaaattc caccccagct
      241 accaatgagg ctcctcaagc gactgtgttc cccaagtccc ctgtgctgct gggtcagccc
      301 aacaccctca tctgctttgt ggacaacatc ttccctcctg tgatcaacat cacatggctc
      361 agaaatagca agtcagtcgc agacggtgtt tatgagacca gcttcttcgt caaccgtgac
      421 tattccttcc acaagctgtc ttatctcacc ttcatccctt ctgacgatga catttatgac
      481 tgcaaggtgg aacactgggg cctggaggag ccggttctga aacactggga acctgagatt
      541 ccagccccca tgtcagagct gacagagact gtggtctgtg ccctggggtt gtctgtgggc
      601 cttgtgggca tcgtggtggg caccatcttc atcattcaag gcctgcgatc aggtggcacc
      661 tccagacacc cagggccttt atgagtcaca ccctggaaag gaaggcgtgt gtccctcttc
      721 atggaagaag tggtgtgctg ggtgacctgg cacagtgtgt tttctggacc aattcatggt
      781 gttctttctc ttcttcaagt gacccccaac ttgcttttct cttggccctg aggctgtccc
      841 tctcacagct cacacaccct tggaattc
//