LOCUS       MUSMHIAAQ                834 bp    mRNA    linear   ROD 27-APR-1993
DEFINITION  Mouse MHC class II H2-IA-alpha gene (q haplotype), mRNA.
ACCESSION   K01925
VERSION     K01925.1
KEYWORDS    antigen; cell surface glycoprotein; class II gene; glycoprotein;
            histocompatibility antigen; integral membrane protein; major
            histocompatibility complex.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 834)
  AUTHORS   Benoist,C.O., Mathis,D.J., Kanter,M.R., Williams,V.E. II and
            McDevitt,H.O.
  TITLE     Regions of allelic hypervariability in the murine A alpha immune
            response gene
  JOURNAL   Cell 34 (1), 169-177 (1983)
   PUBMED   6309407
COMMENT     Original source text: Mouse B10.G (q haplotype) spleen, cDNA to
            mRNA.
            The protein domains are as follows: first external protein domain
            (D1) at bases <1-228; second external protein domain (D2) at bases
            229-510; connecting peptide, transmembrane region, and cytoplasmic
            tail (CP,TM,C) at bases 511-663. [1] also sequenced the IA-alpha
            genes from mice of d,b,f and u haplotypes.
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
     mRNA            <1..>834
                     /product="IA-alpha mRNA"
     CDS             <1..666
                     /note="MHC H2-IA-alpha"
                     /codon_start=1
                     /protein_id="AAA39620.1"
                     /translation="GIVVYQSPGDIGQYTHEFDGDEWFYVDLDKKETVWMLPEFGQLT
                     SFDPQGGLQNIATGKHNLGGWTKRSNFTPATNEAPQATVFPKSPVLLGQPNTLICFVD
                     NIFPPVINITWLRNSKSVTDGVYETSFLVNRDHSFHKLSYLTFIPSDDDIYDCKVEHW
                     GLDEPVLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIFIIQGLRSGGTSRPP
                     GPL"
BASE COUNT          193 a          224 c          202 g          215 t
ORIGIN      35 bp upstream of HaeIII site, chromosome 17.
        1 ggtatagttg tatatcagtc tcctggagac attggccagt atacacatga atttgatggt
       61 gatgagtggt tctatgtgga cttggataag aaggagactg tctggatgct tcctgagttt
      121 ggccaattga caagctttga cccccaaggt ggactacaaa acatagctac aggaaaacac
      181 aacttgggag gctggactaa gaggtcaaat ttcaccccag ctaccaatga ggctcctcaa
      241 gcaactgtgt tccccaagtc ccctgtgctg ctgggtcagc ccaataccct tatctgcttt
      301 gtggacaaca tcttccctcc tgtgatcaac atcacatggc tcagaaatag caagtcagtc
      361 acagacggcg tttatgagac cagcttcctt gtcaaccgtg accattcctt ccacaagctg
      421 tcttatctca ccttcatccc ttctgacgat gacatttatg actgcaaggt ggaacactgg
      481 ggcctggacg agccagttct gaaacactgg gaacctgaga tcccagcccc catgtcagag
      541 ctgacagaga ctgtggtctg tgccctgggg ttgtctgtgg gccttgtggg catcgtggtg
      601 ggaaccatct tcatcattca aggcctgcga tcaggtggca cctccagacc cccaggacct
      661 ttatgagtca caccctggaa aggaaggcat gtgtccctct tcagggaaga agtggtgtgc
      721 tgggtgacct ggaccaattc ttggtgttct ttctcatctt caagtaaccc ccaacttgct
      781 tttccctttg ctccggaggc tgtccctctc acagctcaca cacccgtgga attc
//