LOCUS DQ208406 5194 bp mRNA linear PLN 30-DEC-2005
DEFINITION Oryza sativa (indica cultivar-group) dicer-like protein mRNA,
complete cds.
ACCESSION DQ208406
VERSION DQ208406.1
KEYWORDS .
SOURCE Oryza sativa Indica Group (long-grained rice)
ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE 1 (bases 1 to 5194)
AUTHORS Chen,Z., Kong,J. and Zhu,Y.
TITLE A Dicer-like protein in rice (93-11)
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5194)
AUTHORS Chen,Z., Kong,J. and Zhu,Y.
TITLE Direct Submission
JOURNAL Submitted (17-SEP-2005) College of Life Science, Key Laboratory of
MOE for Plant Developmental Biology, Luojiashan, Wuhan, Hubei
430072, China
FEATURES Location/Qualifiers
source 1..5194
/organism="Oryza sativa Indica Group"
/mol_type="mRNA"
/cultivar="93-11"
/db_xref="taxon:39946"
/tissue_type="spikelet"
CDS 1636..4986
/codon_start=1
/product="dicer-like protein"
/protein_id="ABB20894.1"
/translation="MIERGNLQQQEHIFRMIQTGYYVKNCALYRHPNALSYDLSIQGM
YTYQVQSTGATITADCCVNLIRKYCEKLPKDRYFMPKPSFEVTIEDGLFKCTLTLPRN
AAFQSIVGPLSSSSNLSKQLVSLEACKKLHQLGELNDHLVPLTEEPMDTDFTTADEKC
ISGPGTTKRKELHGTTCVLALSGTWIHDSENITLNTYRIDFLCDQEGENYAGFVLLME
PELDDDVAPSKMDLFLIPNKMVYTTVTPRGKVQLNKKQLGKGKLFQEFFFNGIFGRLF
HGSRKSGAQRDFIFKKGHEIQWNTESMYLLLPLRDSSYIQDDLSIHWEAIESCAGAVE
QLWSSYQGDENVIPVNCIPQKRSGGQEEIIHLANKSLHCSSIKDSVVLSLHTGRIYTV
LDLILDTTAEDSFDEMCKGKASPFTSFVDYYHQKYGIIIQHPEQPLLLLKQSHNAHNL
LFSKLKYLDGSTGKPLLMEKEQIHARVPPELLIHLDVTTDILKSFYLLPSVIHRLQSL
MLASQLRREIGYNQHIPVTLILEAITTLRCCETFSLERLELLGDSVLKYVVGCDLFLR
YPMKHEGQLSDMRSKAVCNATLHKHGIWRSLQGYVRDNAFDPRRWVAPGQISLRPFPC
NCGIETAFVPSHRRYIRDDPSFVVGKPCDRGHRWMCSKTISDCVEALVGAYYVGGGIA
AALWVMRWFGIDIKCDMKLLQEVKFNASHLCSLSKINDIEELEAKLKYNFSVKGLLLE
AITHPSLQELGVDYCYQRLEFLGDSVLDLLLTRHLYATHTDVDPGELTDLRSALVSNE
NFAQAVVRNNIHSHLQHGSGILLGQITEYVRSNLECQGKESEFLQHTTCKVPKVLGDI
MESIAGAVFLDTDFNVDMVWEIFEPLLSPLITPDKLALPPYRELLELCSHIGCFLNSE
CTSKGEVIIEMSLQLRDELLVAQGHDRNKKRAKAKAASRILADLKQQGLSIKQCLSKA
KQLDIVTSDLQFDLTSSGTQLSYSDLNDYHILEGLSSVKKEVVLPLKMEKGGPRSALF
KLCKILQWPMPEFEFVEQRFRTPIVMDGATTTNFNSFVSTITLHIPDATTITFQGERR
TDKKSAQDSASLMMLHKLQELKICICKT"
BASE COUNT 1473 a 1056 c 1172 g 1493 t
ORIGIN
1 atggccgacg acgaggctgc cgtcctcccg cccccgcctc cgctgccgcc gccttgccgc
61 ccccacaggc agctccgccc gagggggtct cgaccgactg ctgataccac ccctcgcact
121 agccagttga tcagtgcagc ttagctgatg ttggctgctc tcctcgttgg cgccgcctgc
181 gtgcgtgcgt gcgtgcaggt accaggtgga ggtgttcgag gcggcgctgc gggggaacac
241 catcgcggtg ctcgacacgg ggtccgggaa gaccatggtc gccgtcatgc tcgcacgcga
301 gcacgcacgc cgggtgcgcg ccggggaggc gccgcggcgg atcgtggtgt tcctcgcgcc
361 caccgtgcac ctcgtccatc agcaattcga ggtgattcgt gagtacactg acctcgacgt
421 gatgatgtgc tctggagcat cgcgggttgg cgaatggggc gccgatcatt ggaaggagga
481 agttgggaga aatgagatcg ttgttatgac gccacagata ctgttggatg ctctgcggca
541 tgcttttctg acaatgagtg cagtgagctt gctaatattt gatgaatgtc atcgtgcttg
601 tggaagccat ccatatgcac gaatgatgaa ggaattttat tttgggtctc ggtggaggcc
661 agatgtattt ggaatgacag cctcccccgt tgctactaaa ggtgcttcca cactacacga
721 ttgtgaagca cacattgctc aactagaact aaccttggat gccaagatat acatcgtaga
781 agatcgaaat gagcttgaga gcttttcccc tcctgcaaca attgtgaaca aatactatga
841 tgcttacatg gttgattttg ataatctgaa atcaaagctt cagatattgt ctgatgagtt
901 tgattctttg ttggttggtc ttcaagaatc gccatctaat aaatttaaag acaccgataa
961 tatcctagag acttcaagaa agagcttgtc cagataccat gggaaaatat tgtacagcct
1021 aaacgatctt ggtccaatta tcacctctga ggtagtcaaa atacatattg aaagcgttaa
1081 gccattatgt gattctgaag actgcatttt ttctaaagct agcttgtgct tacatatgtc
1141 ttattttaaa gaagctttaa gtctaataga ggaaattctt ccacaaggat atggtgaact
1201 aatgaaatca gaatctggtt ctgaggaatt aactaaaagg ggatacattt cttcaaaagt
1261 gaatacgcta atcaacatct tcaaatcgtt tgggtcatca aatgaagtgt tttgcctaat
1321 tttcgtagac agaattatga cagctaaagc cgtcgaaagg tttatgagag gaattgttaa
1381 cttctcttgt ttttcaattt cttacttgac tggagggagt acttcaaaag atgctctgag
1441 tccagcagtt cagagattta ctttggattt gttccgagct ggaaaggtga acttgcttta
1501 tgcaacagat gtgactgaag agggcgtcga tgtaccttct tttcttgtgt gatacgcttc
1561 gacctaccca gaactgtttg tagctatgtc caatctcgtg gtcgtgctag aaggaacaac
1621 tcggaattta ttcttatgat tgagagggga aacttgcagc agcaagaaca catatttcgt
1681 atgatacaga ctggttacta tgttaaaaac tgtgcactct atagacaccc caatgcttta
1741 tcctatgact tgtctatcca agggatgtac acctaccaag ttcagtcaac tggagcaact
1801 ataaccgcag attgctgtgt caacctaatt cgtaaatact gtgagaagct tcctaaagat
1861 aggtatttca tgccaaagcc ttcctttgag gtgaccattg aagatggatt attcaaatgc
1921 acattgacgc tacctcgaaa tgcagcattt caaagtatag ttggcccttt aagcagttca
1981 agtaatttat ccaagcagct tgtatcccta gaggcctgca agaaattgca tcaactggga
2041 gaacttaatg atcatcttgt acctttgact gaagaaccta tggatacaga tttcactaca
2101 gcagatgaaa aatgcatatc tggaccagga acaactaaaa ggaaggagct tcatggtact
2161 acatgtgttc ttgctttatc aggaacttgg attcatgaca gtgaaaatat tacactgaat
2221 acttacagaa ttgattttct ttgtgaccaa gagggtgaaa actatgctgg gtttgttctc
2281 ttaatggaac cagaacttga tgatgatgtg gcaccctcaa aaatggatct gttcctgatc
2341 cctaataaaa tggtctacac cactgtaact cctcgcggaa aagttcaact aaacaaaaag
2401 cagttaggta aagggaaatt gttccaagaa ttctttttca atggaatctt tggtagatta
2461 tttcatggtt ctcgaaaaag tggagcacaa agggatttta ttttcaaaaa gggtcatgaa
2521 atacagtgga acacggaaag catgtacttg cttttacctt tgagggattc ttcatatatc
2581 caggatgacc taagcataca ctgggaagca attgaatctt gtgctggtgc agttgagcag
2641 ttgtggagtt cgtatcaagg agatgaaaat gtcattcctg taaattgtat tccacaaaaa
2701 agaagtgggg gccaagaaga aattattcat ctggccaata agtctcttca ttgttccagc
2761 atcaaagatt cagtcgtgct atcactgcat acaggaagga tatacactgt tcttgatttg
2821 atcttagaca caactgcaga ggactcgttt gatgagatgt gtaaggggaa agcctcacct
2881 tttacttcat ttgtggacta ttaccatcaa aagtatggta ttattattca acatccagaa
2941 caaccactat tgctgttaaa gcaaagccac aatgcacaca atcttctctt ttcaaaattg
3001 aagtatctag atggctccac tggcaaacct ctgctcatgg aaaaagaaca aattcatgct
3061 cgggttccac ctgaactact tatccatctc gatgtaacaa ctgatattct gaagtcattt
3121 tatttactcc cttctgtaat acatcggctt cagtcactta tgctagccag ccagcttcgc
3181 agagaaattg gttacaatca acacatacca gtcactttga ttttggaagc tataacaact
3241 ttaagatgct gtgagacatt ttctctggag cgtttagagc tgttaggaga ctccgtgcta
3301 aagtatgtgg taggatgtga ccttttccta aggtatccta tgaaacatga aggtcagctc
3361 tctgatatga gatccaaggc tgtctgcaat gctacacttc ataaacatgg aatatggcgg
3421 tcgttgcagg gttatgtacg tgataatgct tttgacccac ggcgttgggt tgctcctgga
3481 cagatatcgt tgcgcccttt tccttgtaac tgtggaatcg agactgcatt tgttccttct
3541 catagaaggt atatccgaga tgacccatct tttgttgtgg gaaaaccatg tgacagaggt
3601 cataggtgga tgtgctcaaa aacaatatct gattgtgttg aagcactggt tggagcatat
3661 tatgttggtg gtggcattgc tgctgcactt tgggttatga ggtggtttgg aatcgatatc
3721 aaatgtgata tgaagctatt gcaggaagtg aagttcaatg catctcattt atgctcctta
3781 tcaaaaataa atgacattga ggaactggaa gcaaaactga agtacaactt ctcagtcaag
3841 ggccttcttt tggaagccat aactcatcca tctctgcagg aattaggtgt tgattactgt
3901 taccagcgtc ttgaatttct tggtgattct gtgctggatc tacttcttac acgtcatctc
3961 tatgctactc atactgatgt tgatcctgga gaattaacgg atttacgctc cgctttggtt
4021 agtaatgaga attttgcaca agcagttgta agaaacaaca ttcacagtca tctacaacat
4081 ggatccggaa tacttttggg gcaaattact gaatatgtca ggtcaaattt ggagtgtcaa
4141 gggaaagaga gtgaattcct tcaacatact acatgtaaag tacctaaggt tcttggtgac
4201 attatggaaa gcatcgctgg tgcagtattt ttagacaccg attttaatgt tgacatggtt
4261 tgggagattt tcgagccatt gctttctcca ctgattacac ctgataagct tgcattgcca
4321 ccttaccgtg agttgctgga gctatgcagt cacattggtt gcttcttaaa ttcagaatgc
4381 accagtaaag gagaagtaat tatagagatg tcactgcaac tacgagatga gctgctagta
4441 gcacaagggc atgacagaaa caaaaagagg gcaaaggcaa aagcagcatc tcgtattttg
4501 gcagatctta agcaacaggg tctttcaatt aaacaatgtt tgtccaaggc taaacagctg
4561 gatatcgtga cttcagatct tcagtttgac ttgacaagtt caggaacaca actcagttat
4621 tctgatttga atgactatca tatcctagaa ggtctttcct cagtaaagaa agaagttgtg
4681 cttccactca aaatggagaa aggtggacct cgaagtgcgc ttttcaagct atgcaagatt
4741 ttgcagtggc caatgccaga attcgaattt gtggaacaaa ggttcaggac tcctattgtt
4801 atggatgggg cgacaacaac aaacttcaat agctttgttt cgacaatcac cttgcacata
4861 cctgacgcaa caaccattac atttcaaggt gagcgacgga ctgacaaaaa gagtgctcag
4921 gattcagcat ccttgatgat gcttcacaag cttcaagaac tcaagatctg tatatgcaag
4981 acttagcaaa gcatcattga gacatgggcc aatatgccag ttaacgattg cgactagcta
5041 atgcgagcta cttccctccc aaagtgagat gcgacgaaaa tatttctgaa aagctcgatg
5101 ctccagactg tcactgatcc tatgttattt tggggaagaa gatccctatg gtatactacc
5161 ttgcattacc tggatacatt gttgtcgagt ttcc
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