LOCUS DQ207731 1520 bp DNA linear BCT 14-JUN-2007
DEFINITION Pseudomonas fluorescens strain CCM 2115 16S ribosomal RNA gene,
complete sequence.
ACCESSION DQ207731
VERSION DQ207731.2
KEYWORDS .
SOURCE Pseudomonas fluorescens
ORGANISM Pseudomonas fluorescens
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
REFERENCE 1 (bases 1 to 1520)
AUTHORS Sipos,R., Szekely,A.J., Palatinszky,M., Revesz,S., Marialigeti,K.
and Nikolausz,M.
TITLE Effect of primer mismatch, annealing temperature and PCR cycle
number on 16S rRNA gene-targetting bacterial community analysis
JOURNAL FEMS Microbiol. Ecol. 60 (2), 341-350 (2007)
PUBMED 17343679
REFERENCE 2 (bases 1 to 1520)
AUTHORS Sipos,R. and Szekely,A.J.
TITLE Direct Submission
JOURNAL Submitted (16-SEP-2005) Microbiology, ELTE, Pazmany Peter setany
1/c, Budapest H-1117, Hungary
REFERENCE 3 (bases 1 to 1520)
AUTHORS Sipos,R. and Szekely,A.J.
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2006) Microbiology, ELTE, Pazmany Peter setany
1/c, Budapest H-1117, Hungary
REMARK Sequence update by submitter
COMMENT On Nov 29, 2006 this sequence version replaced DQ207731.1.
FEATURES Location/Qualifiers
source 1..1520
/organism="Pseudomonas fluorescens"
/mol_type="genomic DNA"
/strain="CCM 2115; ATCC 13525"
/type_material="type strain of Pseudomonas fluorescens"
/db_xref="ATCC:13525"
/db_xref="taxon:294"
rRNA 1..1520
/product="16S ribosomal RNA"
BASE COUNT 387 a 336 c 477 g 320 t
ORIGIN
1 agagtttgat cctggctcag attgaacgct ggcggcaggc ctaacacatg caagtcgagc
61 ggtagagaga agcttgcttc tcttgagagc ggcggacggg tgagtaaagc ctaggaatct
121 gcctggtagt gggggataac gttcggaaac ggacgctaat accgcatacg tcctacggga
181 gaaagcaggg gaccttcggg ccttgcgcta tcagatgagc ctaggtcgga ttagctagtt
241 ggtgaggtaa tggctcacca aggcgacgat ccgtaactgg tctgagagga tgatcagtca
301 cactggaact gagacacggt ccagactcct acgggaggca gcagtgggga atattggaca
361 atgggcgaaa gcctgatcca gccatgccgc gtgtgtgaag aaggtcttcg gattgtaaag
421 cactttaagt tgggaggaag ggcattaacc taatacgtta gtgttttgac gttaccgaca
481 gaataagcac cggctaactc tgtgccagca gccgcggtaa tacagagggt gcaagcgtta
541 atcggaatta ctgggcgtaa agcgcgcgta ggtggtttgt taagttggat gtgaaatccc
601 cgggctcaac ctgggaactg cattcaaaac tgactgacta gagtatggta gagggtggtg
661 gaatttcctg tgtagcggtg aaatgcgtag atataggaag gaacaccagt ggcgaaggcg
721 accacctgga ctaatactga cactgaggtg cgaaagcgtg gggagcaaac aggattagat
781 accctggtag tccacgccgt aaacgatgtc aactagccgt tgggagcctt gagctcttag
841 tggcgcagct aacgcattaa gttgaccgcc tggggagtac ggccgcaagg ttaaaactca
901 aatgaattga cgggggcccg cacaagcggt ggagcatgtg gtttaattcg aagcaacgcg
961 aagaacctta ccaggccttg acatccaatg aactttctag agatagattg gtgccttcgg
1021 gaacattgag acaggtgctg catggctgtc gtcagctcgt gtcgtgagat gttgggttaa
1081 gtcccgtaac gagcgcaacc cttgtcctta gttaccagca cgtaatggtg ggcactctaa
1141 ggagactgcc ggtgacaaac cggaggaagg tggggatgac gtcaagtcat catggccctt
1201 acggcctggg ctacacacgt gctacaatgg tcggtacaga gggttgccaa gccgcgaggt
1261 ggagctaatc ccacaaaacc gatcgtagtc cggatcgcag tctgcaactc gactgcgtga
1321 agtcggaatc gctagtaatc gcgaatcaga atgtcgcggt gaatacgttc ccgggccttg
1381 tacacaccgc ccgtcacacc atgggagtgg gttgcaccag aagtagctag tctaaccttc
1441 gggaggacgg ttaccacggt gtgattcatg actggggtga agtcgtaaca aggtagccgt
1501 aggggaacct gcggctggat
//