LOCUS CU458938 2136 bp mRNA linear VRT 21-OCT-2008
DEFINITION Danio rerio cDNA, clone cssl:d0178.
ACCESSION CU458938
VERSION CU458938.1
KEYWORDS .
SOURCE Danio rerio (zebrafish)
ORGANISM Danio rerio
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
Cypriniformes; Cyprinidae; Danio.
REFERENCE 1 (bases 1 to 2136)
AUTHORS Bushell K.M., Sollner C., Bockett N., Wright G.J.
JOURNAL Submitted (22-MAR-2007) to the INSDC. Sanger Institute, Hinxton,
Cambridgeshire, CB10 1SA, UK. E-mail enquiries: gw2@sanger.ac.uk
COMMENT Source clone IMAGE:3721278
FEATURES Location/Qualifiers
source 1..2136
/organism="Danio rerio"
/mol_type="mRNA"
/clone="cssl:d0178"
/db_xref="taxon:7955"
mRNA 1..2136
/standard_name="jam3"
CDS 20..928
/standard_name="jam3"
/db_xref="GOA:A3KPA0"
/db_xref="InterPro:IPR003598"
/db_xref="InterPro:IPR003599"
/db_xref="InterPro:IPR007110"
/db_xref="InterPro:IPR013106"
/db_xref="InterPro:IPR013783"
/db_xref="InterPro:IPR036179"
/db_xref="UniProtKB/TrEMBL:A3KPA0"
/db_xref="ZFIN:ZDB-GENE-030131-441"
/protein_id="CAM73199.1"
/translation="MALTPLACVLLLLSMQCYISTLAVLLKSTNSKPWVNEFESIELS
CMIESITTTKPRIEWKKIKNGDPSYVYFDNQISGDLERRAKIREPATLVILNATRSDS
ADYRCEVTAPNDQKSFDEILISLTVRVKPVVPRCSVPKSIPVGKPAELHCLEDEGYPK
SQYQWFRNKEEIPLDPKSSPKFFNSTYTLDGEMGTLKFSAVRKEDAGEYYCRAKNEAG
ISECGPQMMEVYDINIAGIILGVVVVVMVLLCITVGIFCAYKRGYFTSQKQTGNNYKP
PAKGDGVDYVRTEDEGDFRHKSSFVI"
BASE COUNT 636 a 448 c 439 g 613 t
ORIGIN
1 gacccacgcg tccgccaaga tggcgttaac accactggct tgcgttctgc ttctcctttc
61 catgcaatgt tacatcagca ccttggcagt cctcctgaag tcgacgaatt ctaaaccgtg
121 ggtcaacgag tttgaatcaa tcgagctgtc ctgcatgatc gagtccatca ccaccactaa
181 acccagaata gagtggaaga agattaagaa tggagaccca agctatgtgt attttgataa
241 tcaaatatca ggtgacttgg aaaggagagc aaaaattcga gagcctgcaa ccctggtcat
301 tcttaatgcc acaagatcgg acagcgctga ctaccgctgt gaggtcacag cacccaatga
361 ccagaaatcc ttcgatgaga tcttgatatc actcactgta cgagtgaagc cagtcgtgcc
421 cagatgctct gtgcccaagt ctatcccggt gggcaaacca gcagagctgc attgcctgga
481 ggatgaaggc tacccaaaat ctcaatacca gtggttccgc aacaaggagg aaatcccact
541 agatcccaag agcagcccaa agttcttcaa ctcaacttac accctagacg gggaaatggg
601 cacgctgaaa ttcagtgcgg tcaggaagga ggacgcggga gaatattact gcagagccaa
661 aaatgaggct ggcatctctg aatgtggacc gcagatgatg gaagtttatg acatcaacat
721 tgccggcatc atcttgggag tcgtggtggt ggtgatggtc ctcttgtgta taacagtggg
781 catcttctgt gcctataaac gtggctactt caccagccag aagcagacgg gaaacaatta
841 taaacctcca gcaaaaggag atggagtgga ctatgtcaga acagaggatg agggggattt
901 caggcacaaa tcctcatttg tcatctgaga ggaggaagat ttctgatgga agagatgcag
961 aattacgttc gatttattgg cgctatttta cctcgcagac acaaatcccc aaatgaggac
1021 acagatgtca gagctgccac ggcacgtgcc tcgctttacg acacaacagt gactacaaaa
1081 cttgtatttg ccaaaggtga caaataatcg catctgatca ctgtttaaag acgtattaga
1141 tgttactctt ttcaactttt acagcccctt tttacgactg acaaaaatct caaatttgag
1201 tagaagccga taaatacagt agtacatcca gaaaacgttt tcctcaagct cttctgtcac
1261 tttgagaaca tttgttttgt actagctaaa tttctcagac tatttttgat ggaatatatt
1321 ttaaaaatgc ctatagaaat caaaatgttt taccttttta aatatttgta aaatactaac
1381 ctggaagcca gtacctttta gttttagctt cttttttttt gattgtgact aagtttaaac
1441 cactcacttc acatcctcgg ttttcgttct acaacatgca aacgatgcac caaaccactc
1501 gacgtgtgga tgttttgttt tccagttcaa atcctttcag tcgcatatcc agcgaacacc
1561 ggcttcaatc aaaggtctta tgtaatgaca aaactgctgg gatttcatgg tagtagtgaa
1621 aggacgttcc atgttcatgt ttgtagatag tcttagacgg tgaacatctt cagaaaaaca
1681 ccagcaaaaa aaaaaaaaca aacaaaaaaa aaagctggag attattttga aagaccagtg
1741 ctgcgtattt ttgattttaa gtgtccttct tatgctagct gttaatcttg tatatagtga
1801 atatactgtc taggttgttt cttatttttt tattatgata tatttttcct ttgctttctc
1861 ttttcttttt attatttgag tgaataagca cactcctcat gttactttat aacacaacag
1921 ggtttgttag ttggctaact gttactggtt gtatatagat ccactgtgcg atacactgtg
1981 cgtaagacgt tattggttga accaaacgct gaatgaggca aatatgacac tctttccatg
2041 gtagagaggg gatctgcctt attaaataca ttacagcaaa cctggaacca tgtaaactta
2101 cctttacttc tatagccatg attatgaata tattta
//