LOCUS CU458748 2778 bp mRNA linear VRT 23-MAR-2007
DEFINITION Danio rerio cDNA, clone cssl:d0100.
ACCESSION CU458748
VERSION CU458748.1
KEYWORDS .
SOURCE Danio rerio (zebrafish)
ORGANISM Danio rerio
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
Cypriniformes; Cyprinidae; Danio.
REFERENCE 1 (bases 1 to 2778)
AUTHORS Bushell K.M., Sollner C., Bockett N., Wright G.J.
JOURNAL Submitted (22-MAR-2007) to the INSDC. Sanger Institute, Hinxton,
Cambridgeshire, CB10 1SA, UK. E-mail enquiries: gw2@sanger.ac.uk
COMMENT Cloned from mixed stage wild-type cDNA
FEATURES Location/Qualifiers
source 1..2778
/organism="Danio rerio"
/mol_type="mRNA"
/clone="cssl:d0100"
/db_xref="taxon:7955"
mRNA 1..2778
/standard_name="robo1"
CDS 17..>2778
/standard_name="robo1"
/note="partial CDS"
/db_xref="GOA:A4JYD2"
/db_xref="InterPro:IPR003598"
/db_xref="InterPro:IPR003599"
/db_xref="InterPro:IPR003961"
/db_xref="InterPro:IPR007110"
/db_xref="InterPro:IPR013098"
/db_xref="InterPro:IPR013106"
/db_xref="InterPro:IPR013783"
/db_xref="InterPro:IPR032986"
/db_xref="InterPro:IPR036116"
/db_xref="InterPro:IPR036179"
/db_xref="UniProtKB/TrEMBL:A4JYD2"
/db_xref="ZFIN:ZDB-GENE-000209-3"
/protein_id="CAM60060.1"
/translation="MTGRIIGFVLFIAVIHVCTGSRLRQEDYAPRIVEHPSDLIVSKG
EPATLNCKAEGRPTPTVEWYKDGERVETDRDNPRSHRMLLPTGSLFFLRIVHGRRSKP
DEGSYVCVARNYLGEAVSHNASLEVAILRDDFRQNPVDVMVAAGEPAVMECQPPRGHP
EPTISWKKDGVNIDDRDERITIRGGKLMITNTRKTDAGKYVCVGTNMMGERESEIAEL
TVLERPSFLRKPSSQSVLVDQSVEFRCEAQGDPVPTIRWRKEDGELPKGRYEIWEDHT
LKLKRLTSGDAGTYTCQAENMMGKTEASATLTVHVVSVPPVFVVRPRNQVAGMGRTVT
FQCEATGSPQPAIFWQKEGSQNLLFSSQPPPPSSRFSVSQTGDLTITAVERSDGGYYS
CQALNIAGSVITKALLEVTDVISDRPPPIVRQGPTNQTVAVDGTVVLSCQATGTPIPT
ILWRKDGVLVSTHDSRLKQLDTGALQIRYAKLGDTGMYTCTASTPSGEASWKAYLEVQ
EFGAPVQPGRPTDPNLIPSAPSKPDVTDVSRTSVSLSWKPNLNAGATPTSYVIEAFSH
AAGSSWQTLADHVKAESFVLKGLKPSAVYLFLVRAANAYGLSDPSPISDAVKTQDVPP
TSQGVEHGQIQRELGDVVIHLHNPTILSSSSVRVQWTVEQQSQYIQGYKVMYRPSPEG
APQRVDWAMFEVGAPGEHSAVVTQLKKGITYEFKVRPFFNEFQGTDSDIKVGKTLEEA
PSAAPRGVTVTGSGDNGTAVLVAWQPPPEEEQNGVVQEYKIWCLGNESRYHINRTVDG
STHSVLIPGLVAGVTYRLEVAAGTGAGPGVKSDPTSFQLDSSGRVLPPPLDDDNTISQ
QISDVVRQPAFIAGIGAACWIIPDGVQHLAIPPPQEEERPQQQLRRHPQSALLHLHPH
SGPIRKG"
BASE COUNT 660 a 804 c 786 g 528 t
ORIGIN
1 cgcgaatatt taaacgatga cggggagaat aattggattc gtgcttttta tcgcagttat
61 acacgtttgc acaggatccc gtctgcggca ggaagattac gcaccccgca ttgttgaaca
121 cccctctgat ctgatcgtat ccaaaggtga accggccacc cttaactgca aggctgaagg
181 acgtcccacg cccacagtgg agtggtacaa agatggagaa cgagtggaaa ccgaccggga
241 caatcctcga tcccaccgca tgctcctgcc caccggatct ctcttctttc tccgcattgt
301 tcacggccgg cgcagcaaac ccgacgaagg ctcctacgtt tgtgtggcac gtaactatct
361 gggagaagcc gtcagccaca acgcctcgct ggaagtagct attctccgag atgatttccg
421 acagaaccct gtggacgtga tggtggcagc gggggagcca gctgtaatgg agtgccagcc
481 gccccgagga cacccagagc ccaccatctc ctggaagaaa gatggggtca atatagacga
541 cagagacgag aggataacga tacgaggagg aaagctcatg atcaccaaca ccagaaaaac
601 ggacgcgggg aagtacgtgt gcgtgggaac caacatgatg ggggaacgag agagcgagat
661 cgcggagttg actgttctcg agaggcccag tttcttgcga aagccgagca gccagtccgt
721 ccttgtggat cagagcgttg agttcagatg tgaagctcaa ggagaccccg tgcccaccat
781 ccgatggagg aaagaggacg gagaactgcc caagggaagg tatgagatct gggaggacca
841 cactctcaaa ctgaagagac tgacttcagg agacgccggt acttacacct gtcaggcgga
901 gaacatgatg ggcaagacgg aggccagcgc caccctcacc gtccacgttg tgtctgttcc
961 tccagtgttt gtggtccgac ccaggaatca ggtggcgggt atgggccgca ccgtcacctt
1021 tcagtgtgaa gccacaggaa gtcctcagcc tgcaatattc tggcagaaag aaggcagtca
1081 gaatctcctg ttctcgtctc agcctcctcc tccgtccagc agattctctg tgtctcagac
1141 tggagatctg accatcacag cagttgagcg ttcagatgga ggatattata gctgtcaggc
1201 tctcaacatc gctggcagtg tgatcaccaa agccctgctg gaggttacag acgtgatttc
1261 agacaggcct ccaccaatcg tccgtcaggg tccaaccaac cagactgtgg cagtggacgg
1321 gacggtggtt ctgagctgcc aagccaccgg gacaccgatt cctaccatct tatggaggaa
1381 agatggagtt ctggtgtcca cacatgattc ccgactcaag cagctggaca ctggagccct
1441 gcagattcga tacgcaaagc tgggcgacac tggcatgtac acctgcacgg cttccacccc
1501 gagcggagag gcgtcctgga aggcctacct ggaggtgcaa gagtttggtg ctccagttca
1561 accgggccgt cccacagatc ccaacctcat ccccagcgcc ccatctaaac cagacgtcac
1621 ggatgtcagc cgcacctccg tgtctctttc ctggaagccg aatctgaacg ctggagccac
1681 acccacctca tacgtcattg aggccttcag ccatgcagca ggcagcagct ggcagacgct
1741 cgccgatcat gtgaaggcgg aaagcttcgt gcttaagggt ctgaagccaa gtgccgtcta
1801 cctgtttctg gtgagagcgg ccaatgcgta cggcctgagc gaccccagtc ccatcagcga
1861 cgctgtcaaa acacaagacg tcccaccaac cagccaggga gtggagcatg gccagatcca
1921 gagagaactg ggagatgtcg tcattcacct tcacaatccc acaattctct catcgtcttc
1981 cgtcagagtc cagtggactg tggagcagca gtctcagtat attcagggct ataaggtgat
2041 gtaccgtccg tctccagaag gcgctccgca gcgagtggat tgggccatgt ttgaggtcgg
2101 agccccgggg gagcacagcg ctgtcgtcac ccagctcaag aagggcatca cctatgagtt
2161 caaagtgcgc cctttcttca atgagttcca gggcaccgac agcgacatca aagtgggaaa
2221 gaccctggag gaggctccca gcgctgctcc cagaggcgtc accgtaacag gaagtggaga
2281 caacggcaca gcagtcctgg tcgcctggca accgccgcca gaggaggagc agaacggcgt
2341 tgtgcaggag tacaagatct ggtgtcttgg taatgaaagc cgataccaca tcaaccgcac
2401 agtggatggt tctacacact cggtgttgat tcctggtctg gtggcaggag tcacatacag
2461 gctagaggtg gcagcaggca ctggggccgg acccggggtc aagagcgacc ctacgtcctt
2521 ccagcttgac tcttctggcc gtgttctccc gccgccgctg gacgacgata acaccatttc
2581 ccagcagatc tcagacgtgg tgcgtcagcc ggctttcatc gcgggcatcg gcgccgcctg
2641 ctggatcatc cctgatggtg ttcagcatct ggctataccg ccaccgcaag aagaggaacg
2701 gcctcagcag cagctacgcc ggcatccgca aagtgccctc cttcaccttc acccccacag
2761 tggccctatc agaaaagg
//