LOCUS BC152439 5706 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens phosphodiesterase 4D interacting protein, mRNA (cDNA
clone IMAGE:8862561), complete cds.
ACCESSION BC152439
VERSION BC152439.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5706)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5706)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-AUG-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Kazusa DNA Research Inst.
cDNA Library Preparation: Kazusa DNA Research Institute
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCF Plate: 15 Row: e Column: 7
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..5706
/db_xref="H-InvDB:HIT000436030"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:8862561"
/tissue_type="Clones donated by Kazusa DNA Research Inst."
/clone_lib="Kazusa-KIAA-pBluescriptIISK+"
/lab_host="DH5alpha T1-resistant"
/note="Vector: pBluescript II SK+; Clone identification
sequence tag: NA"
gene 1..5706
/gene="PDE4DIP"
/gene_synonym="MMGL"
/db_xref="GeneID:9659"
/db_xref="HGNC:HGNC:15580"
/db_xref="MIM:608117"
CDS 658..4056
/gene="PDE4DIP"
/gene_synonym="MMGL"
/codon_start=1
/product="phosphodiesterase 4D interacting protein"
/protein_id="AAI52440.1"
/db_xref="GeneID:9659"
/db_xref="HGNC:HGNC:15580"
/db_xref="MIM:608117"
/translation="MKEICRICARELCGNQRRWIFHTASKLNLQVLLSHVLGKDVPRD
GKAEFACSKCAFMLDRIYRFDTVIARIEALSIERLQKLLLEKDRLKFCIASMYRKNND
DSGAEIKAGNGTVDMSVLPDARYSALLQEDFAYSGFECWVENEDQIQEPHSCHGSEGP
GNRPRRCRGCAALRVADSDYEAICKVPRKVARSISCGPSSRWSTSICTEEPALSEVGP
PDLASTKVPPDGESMEEETPGSSVESLDASVQASPPQQKDEETERSAKELGKCDCCSD
DQAPQHGCNHKLELALSMIKGLDYKPIQSPRGSRLPIPVKSSLPGAKPGPSMTDGVSS
GFLNRSLKPLYKTPVSYPLELSDLQELWDDLCEDYLPLRVQPMTEELLKQQKLNSHET
TITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSYELKCAQESSQKQDGTIQNLK
ETLKSRERETEELYQVIEGQNDTMAKLREMLHQSQLGQLHSSEGTSPAQQQVALLDLQ
SALFCSQLEIQKLQRVVRQKERQLADAKQCVQFVEAAAHESEQQKEASWKHNQELRKA
LQQLQEELQNKSQQLRAWEAEKYNEIRTQEQNIQHLNHSLSHKEQLLQEFRELLQYRD
NSDKTLEANEMLLEKLRQRIHDKAVALERAIDEKFSALEEKEKELRQLRLAVRERDHD
LERLRDVLSSNEATMQSMESLLRAKGLEVEQLSTTCQNLQWLKEEMETKFSRWQKEQE
SIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSDRN
KQVLEHEMEIQGLLQSVSTREQESQAAAEKLVQALMERNSELQALRQYLGGRDSLMSQ
APISNQQAEVTPTGRLGKQTDQGSMQIPSRDDSTSLTAKEDVSIPRSTLGDLDTVAGL
EKELSNAKEELELMAKKERESQMELSALQSMMAVQEEELQVQAADMESLTRNIQIKED
LIKDLQMQLVDPEDIPAMERLTQEVLLLREKVASVESQGQEISGNRRQQLLLMLEGLV
DERSRLNEALQAERQLYSSLVKFHAHPESSERDRTLQVELEGAQVLRSRLEEVLGRSL
ERLNRLETLAAIGGAAAGDDTEDTSTEFTDSIEEEAAHHSHQQL"
BASE COUNT 1608 a 1312 c 1489 g 1297 t
ORIGIN
1 ggatccttga gggcactggt gcgactttca ggtgaggtct tagcagatga aagcggctgg
61 ctgtggcccg cgccagtagt gctttctgct ccgcactcgc cgtgagccag gtgtgcaacc
121 ggatttgggg cgagggtcgc gctggctacc tcgcatgcgc agagccggaa gcccgctgac
181 cggactacag ctcccagaag agccttgtgg aggccgcaga cgcgaagccg ctggcgccat
241 cttgaaatct gatcctccat ccccgaggct ttgcgtctgc gcggccggcc gctgctgctc
301 cgggagccca gtctgctaaa aggggaggac gttgaggacg cggcggctgg cgggagagac
361 agctggggag agacatggca gggtcggagc gcggcctgcg cctctgtcac tcagcatcct
421 cttaggcgtt tccacgcccg ccccctgccc gaggggcggg gctgacggct ctggtacccg
481 gagtcggcgc gcggggcagg ggcgcgcccc tgcagagtgg ggaccccact gggctgtgcc
541 atgctgaccg gagaccaccg aggcgggaga cagagcgcgg cgaagagcca ttgagtggtc
601 acccagtagc cgccgccgcc gccgcctcgg gaagcttgcc acccgctagg agggaagatg
661 aaggagattt gcaggatctg tgcccgagag ctgtgtggaa accagcggcg ctggatcttc
721 cacacggcgt ccaagctcaa tctccaggtt ctgctttcgc acgtcttggg caaggatgtc
781 ccccgcgatg gcaaagccga gttcgcttgc agcaagtgtg ctttcatgct tgatcgaatc
841 tatcgattcg acacagttat tgcccggatt gaagcgcttt ctattgagcg cttgcaaaag
901 ctgctactgg agaaggatcg cctcaagttc tgcattgcca gtatgtatcg gaagaataac
961 gatgactctg gcgcggagat caaggcgggg aatgggacgg ttgacatgtc cgtcttaccc
1021 gatgcgagat actctgcact gctccaggag gacttcgcct attcagggtt tgagtgctgg
1081 gtggagaatg aggatcagat ccaggagcca cacagctgcc atggttcaga aggccctgga
1141 aaccgaccca ggagatgccg tggttgtgcc gctttgcggg ttgctgattc tgactatgaa
1201 gccatttgta aggtacctcg aaaggtggcc agaagtatct cctgcggccc ttctagcagg
1261 tggtcgacca gcatttgcac tgaagaacca gcgttgtctg aggttgggcc acccgactta
1321 gcaagcacaa aggtaccccc agatggagaa agcatggagg aagagacgcc tggttcctct
1381 gtggaatctt tggatgcaag cgtccaggct agccctccac aacagaaaga tgaggagact
1441 gagagaagtg caaaggaact tggaaagtgt gactgttgtt cagatgatca ggctccgcag
1501 catgggtgta atcacaagct ggaattagct cttagcatga ttaaaggtct tgattataag
1561 cccatccaga gcccccgagg gagcaggctt ccgattccag tgaaatccag cctacctgga
1621 gccaagcctg gccctagcat gacagatgga gttagttccg gtttccttaa caggtctttg
1681 aaaccccttt acaagacacc tgtgagttat cccttggagc tttcagacct gcaggagctg
1741 tgggatgatc tctgtgaaga ttatttgccg ctccgggtcc agcccatgac tgaagagttg
1801 ctgaaacaac aaaagctgaa ttcacatgag accactataa ctcagcagtc tgtatctgat
1861 tcccacttgg cagaactcca ggaaaaaatc cagcaaacag aggccaccaa caagattctt
1921 caagagaaac ttaatgaaat gagctatgaa ctaaagtgtg ctcaggagtc gtctcaaaag
1981 caagatggta caattcagaa cctcaaggaa actctgaaaa gcagggaacg tgagactgag
2041 gagttgtacc aggtaattga aggtcaaaat gacacaatgg caaagcttcg agaaatgctg
2101 caccaaagcc agcttggaca acttcacagc tcagagggta cttctccagc tcagcaacag
2161 gtagctctgc ttgatcttca gagtgcttta ttctgcagcc aacttgaaat acagaagctc
2221 cagagggtgg tacgacagaa agagcgccaa ctggctgatg ccaaacaatg tgtgcaattt
2281 gtagaggctg cagcacacga gagtgaacag cagaaagagg cttcttggaa acataaccag
2341 gaattgcgaa aagccttgca gcagctacaa gaagaattgc agaataagag ccaacagctt
2401 cgtgcctggg aggctgaaaa atacaatgag attcgaaccc aggaacaaaa catccagcac
2461 ctaaaccata gtctgagtca caaggagcag ttgcttcagg aatttcggga gctcctacag
2521 tatcgagata actcagacaa aacccttgaa gcaaatgaaa tgttgcttga gaaacttcgc
2581 cagcgaatac atgataaagc tgttgctctg gagcgggcta tagatgaaaa attctctgct
2641 ctagaagaga aagaaaaaga actgcgccag cttcgtcttg ctgtgagaga gcgagatcat
2701 gacttagaga gactgcgcga tgtcctctcc tccaatgaag ctactatgca aagtatggag
2761 agtctcctga gggccaaagg cctggaagtg gaacagttat ctactacctg tcaaaacctc
2821 cagtggctga aagaagaaat ggaaaccaaa tttagccgtt ggcagaagga acaagagagt
2881 atcattcagc agttacagac gtctcttcat gataggaaca aagaagtgga ggatcttagt
2941 gcaacactgc tctgcaaact tggaccaggg cagagtgaga tagcagagga gctgtgccag
3001 cgtctacagc gaaaggaaag gatgctgcag gaccttctaa gtgatcgaaa taaacaagtg
3061 ctggaacatg aaatggagat tcaaggcctg cttcagtctg tgagcaccag ggagcaggaa
3121 agccaagctg ctgcagagaa gttggtgcaa gccttaatgg aaagaaattc agaattacag
3181 gccctgcgcc aatatttagg agggagagac tccctgatgt cccaagcacc catctctaac
3241 caacaagctg aagttacccc cactggccgt cttggaaaac agactgatca aggttcaatg
3301 cagatacctt ccagagatga tagcacttca ttgactgcca aagaggatgt cagcataccc
3361 agatccacat taggagactt ggacacagtt gcagggctgg aaaaagaact gagtaatgcc
3421 aaagaggaac ttgaactcat ggctaaaaaa gaaagagaaa gtcagatgga actttctgct
3481 ctacagtcca tgatggctgt gcaggaagaa gagctgcagg tgcaggctgc tgatatggag
3541 tctctgacca ggaacataca gattaaagaa gatctcataa aggacctgca aatgcaactg
3601 gttgatcctg aagacatacc agctatggaa cgcctgaccc aggaagtctt acttcttcgg
3661 gaaaaagttg cttcagtaga atcccagggt caagaaattt caggaaaccg aagacaacag
3721 ttgctgctga tgctagaagg actagtagat gaacggagtc ggctcaatga ggccttacaa
3781 gcagagagac agctctatag cagtctggtg aagttccatg cccatccaga gagctctgag
3841 agagaccgaa ctctgcaggt ggaactggaa ggggctcagg tgttacgcag tcggctagaa
3901 gaagttcttg gaagaagctt ggagcgctta aacaggctgg agaccctggc cgccattgga
3961 ggtgcagctg caggggatga caccgaagat acaagcactg agttcactga cagtattgag
4021 gaggaggctg cacaccatag tcaccagcaa ctatagcttc agaagcattt ttacttgcaa
4081 gacgatggac acattcccct tgggcttttt gtaactgaaa cgcaccacag aagacaggga
4141 gtcatcgaag ggctgctcgg ggaggtggca gggcggagga cctgcttggg aagaaactcc
4201 aagaagattg gaatgcttcc aaagcaagaa tctttctcag tgaaatctca ttatacaaag
4261 agaaccttat gcaacctgac aaaccactga ggtcatggtg actcagtgat cagcagatgg
4321 tacttcaaca gcaatcccct gtcaaacctc agaacttgag gctgaaacat tgcttccacc
4381 caccatcagt gaagatgtaa ctagcatgtt acaagagtga ataatctgga cttcagagat
4441 taagtcacca atagtgatct cacaagcact caccggaact cctataatgt ctccactttg
4501 tccatgccat ttagcaatct catctcctaa atggactgtg cctatgattc ttaaggagaa
4561 agtgaatcat tggtagatat cctgcacaag cagctggact ttccagtaat agctttcttg
4621 gggctattag gaaaattaaa caagaaatga ggctttctgg gtctgcctgt atgtcttctg
4681 cataagacaa agaagagaca tcgaatcaac caataagaag agcccaaata agcatcctca
4741 aatcttttgg gatttggcac ttggggacat gagtagttgt ctgggatacg tcatattctc
4801 aacagtttct ttgtagtagt aggatcacct tcttataata ggatcacctt cttgttgcta
4861 tagctgtacc cgaccttccc ttctcccttg agtgcttgca tgagctccac ttttcctttt
4921 gcttgaacag cttctcctga gtcctcctta ccgatggttg tgactttaat tatatacatc
4981 tctgtccctc cagacagatc cctctgtcct cactctctga tttcattgag gatcttgggt
5041 gagagagagg gacctgcagg atgaacaaat gtctactcta agacagctag attgggaggt
5101 tggctggtca ctgatggtta taatgactgt gggacaggat taacttcaga ataaatgaac
5161 aggagacaca gatatgaaga aagtttctga ttgatatggt ctgaagtact cctggtattg
5221 caagtcattt gctctaattc tcaattgtag gcaaactgat ttgtaaattt gcttcttcag
5281 ccttctttcc tgtagcctag catggagaat ctgaccagac cccattttga gaaggtcagc
5341 ctacactgga atgaactttt tacattaggg catttgtatt tccctcacaa tacttgccac
5401 attacttggc ataggagaga tgcttagtgt aattataagt taacaagcct ttggatcagg
5461 gcttgactca tgatagacaa agtatatgcc tgctggatgg aagaatctct tgggcgagca
5521 ccatttttct ttccatcacc tttccttgaa aatatatctt cagctttggg taggaggaat
5581 cttggtgtat gaaatcattg caaatttact tcatcttttc tggagtttga agttgtgact
5641 ctcctgctac caattaaata aagcttactt tgccataaaa aaaaaaaaaa aaaaaaaaaa
5701 aaaaaa
//