LOCUS BC132717 4712 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens phosphodiesterase 4D interacting protein, mRNA (cDNA
clone IMAGE:40146739), complete cds.
ACCESSION BC132717
VERSION BC132717.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4712)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4712)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 9 Row: C Column: 3
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..4712
/db_xref="H-InvDB:HIT000390770"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40146739"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_312"
/note="Vector: pCR-XL-TOPO; Clone identification sequence
tag: CTGCCTTC"
gene 1..4712
/gene="PDE4DIP"
/gene_synonym="MMGL"
/db_xref="GeneID:9659"
/db_xref="HGNC:HGNC:15580"
/db_xref="MIM:608117"
CDS 261..3659
/gene="PDE4DIP"
/gene_synonym="MMGL"
/codon_start=1
/product="phosphodiesterase 4D interacting protein"
/protein_id="AAI32718.1"
/db_xref="GeneID:9659"
/db_xref="HGNC:HGNC:15580"
/db_xref="MIM:608117"
/translation="MKEICRICARELCGNQRRWIFHTASKLNLQVLLSHVLGKDVPRD
GKAEFACSKCAFMLDRIYRFDTVIARIEALSIERLQKLLLEKDRLKFCIASMYRKNND
DSGAEIKAGNGTVDMSVLPDARYSALLQEDFAYSGFECWVENEDQIQEPHSCHGSEGP
GNRPRRCRGCAALRVADSDYEAICKVPRKVARSISCGPSSRWSTSICTEEPALSEVGP
PDLASTKVPPDGESMEEETPGSSVESLDASVQASPPQQKDEETERSAKELGKCDCCSD
DQAPQHGCNHKLELALSMIKGLDYKPIQSPRGSRLPIPVKSSLPGAKPGPSMTDGVSS
GFLNRSLKPLYKTPVSYPLELSDLQELWDDLCEDYLPLRVQPMTEELLKQQKLNSHET
TITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSYELKCAQESSQKQDGTIQNLK
ETLKSRERETEELYQVIEGQNDTMAKLREMLHQSQLGQLHSSEGTSPAQQQVALLDLQ
SALFCSQLEIQKLQRVVRQKERQLADAKQCVQFVEAAAHESEQQKEASWKHNQELRKA
LQQLQEELQNKSQQLRAWEAEKYNEIRTQEQNIQHLNHSLSHKEQLLQEFRELLQYRD
NSDKTLEANEMLLEKLRQRIHDKAVALERAIDEKFSALEEKEKELRQLRLAVRERDHD
LERLRDVLSSNEATMQSMESLLRAKGLEVEQLSTTCQNLQWLKEEMETKFSRWQKEQE
SIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSDRN
KQVLEHEMEIQGLLQSVSTREQESQAAAEKLVQALMERNSELQALRQYLGGRDSLMSQ
APISNQQAEVTPTGRLGKQTDQGSMQIPSRDDSTSLTAKEDVSIPRSTLGDLDTVAGL
EKELSNAKEELELMAKKERESQMELSALQSMIAVQEEELQVQAADMESLTRNIQIKED
LIKDLQMQLVDPEDIPAMERLTQEVLLLREKVASVESQGQEISGNRRQQLLLMLEGLV
DERSRLNEALQAERQLYSSLVKFHAHPESSERDRTLQVELEGAQVLRSRLEEVLGRSL
ERLNRLETLAAIGGAAAGDDTEDTSTEFTDSIEEEAAHHSHQQL"
BASE COUNT 1353 a 1092 c 1227 g 1040 t
ORIGIN
1 gcgcctctgt cactcagcat cctcttaggc gtttccacgc ccgccccctg cccgaggggc
61 ggggctgacg gctctggtac ccggagtcgg cgcgcggggc aggggcgcgc ccctgcagag
121 tggggacccc actgggctgt gccatgctga ccggagacca ccgaggcggg agacagagcg
181 cggcgaagag ccattgagtg gtcacccagt agccgccgcc gccgccgcct cgggaagctt
241 gccacccgct aggagggaag atgaaggaga tttgcaggat ctgtgcccga gagctgtgtg
301 gaaaccagcg gcgctggatc ttccacacgg cgtccaagct caatctccag gttctgcttt
361 cgcacgtctt gggcaaggat gtcccccgcg atggcaaagc cgagttcgct tgcagcaagt
421 gtgctttcat gcttgatcga atctatcgat tcgacacagt tattgcccgg attgaagcgc
481 tttctattga gcgcttgcaa aagctgctac tggagaagga tcgcctcaag ttctgcattg
541 ccagtatgta tcggaagaat aacgatgact ctggcgcgga gatcaaggcg gggaatggga
601 cggttgacat gtccgtctta cccgatgcga gatactctgc actgctccag gaggacttcg
661 cctattcagg gtttgagtgc tgggtggaga atgaggatca gatccaggag ccacacagct
721 gccatggttc agaaggccct ggaaaccgac ccaggagatg ccgtggttgt gccgctttgc
781 gggttgctga ttctgactat gaagccattt gtaaggtacc tcgaaaggtg gccagaagta
841 tctcctgcgg cccttctagc aggtggtcga ccagcatttg cactgaagaa ccagcgttgt
901 ctgaggttgg gccacccgac ttagcaagca caaaggtacc cccagatgga gaaagcatgg
961 aggaagagac gcctggttcc tctgtggaat ctttggatgc aagcgtccag gctagccctc
1021 cacaacagaa agatgaggag actgagagaa gtgcaaagga acttggaaag tgtgactgtt
1081 gttcagatga tcaggctccg cagcatgggt gtaatcacaa gctggaatta gctcttagca
1141 tgattaaagg tcttgattat aagcccatcc agagcccccg agggagcagg cttccgattc
1201 cagtgaaatc cagcctacct ggagccaagc ctggccctag catgacagat ggagttagtt
1261 ccggtttcct taacaggtct ttgaaacccc tttacaagac acctgtgagt tatcccttgg
1321 agctttcaga cctgcaggag ctgtgggatg atctctgtga agattatttg ccgctccggg
1381 tccagcccat gactgaagag ttgctgaaac aacaaaagct gaattcacat gagaccacta
1441 taactcagca gtctgtatct gattcccact tggcagaact ccaggaaaaa atccagcaaa
1501 cagaggccac caacaagatt cttcaagaga aacttaatga aatgagctat gaactaaagt
1561 gtgctcagga gtcgtctcaa aagcaagatg gtacaattca gaacctcaag gaaactctga
1621 aaagcaggga acgtgagact gaggagttgt accaggtaat tgaaggtcaa aatgacacaa
1681 tggcaaagct tcgagaaatg ctgcaccaaa gccagcttgg acaacttcac agctcagagg
1741 gtacttctcc agctcagcaa caggtagctc tgcttgatct tcagagtgct ttattctgca
1801 gccaacttga aatacagaag ctccagaggg tggtacgaca gaaagagcgc caactggctg
1861 atgccaaaca atgtgtgcaa tttgtagagg ctgcagcaca cgagagtgaa cagcagaaag
1921 aggcttcttg gaaacataac caggaattgc gaaaagcctt gcagcagcta caagaagaat
1981 tgcagaataa gagccaacag cttcgtgcct gggaggctga aaaatacaat gagattcgaa
2041 cccaggaaca aaacatccag cacctaaacc atagtctgag tcacaaggag cagttgcttc
2101 aggaatttcg ggagctccta cagtatcgag ataactcaga caaaaccctt gaagcaaatg
2161 aaatgttgct tgagaaactt cgccagcgaa tacatgataa agctgttgct ctggagcggg
2221 ctatagatga aaaattctct gctctagaag agaaagaaaa agaactgcgc cagcttcgtc
2281 ttgctgtgag agagcgagat catgacttag agagactgcg cgatgtcctc tcctccaatg
2341 aagctactat gcaaagtatg gagagtctcc tgagggccaa aggcctggaa gtggaacagt
2401 tatctactac ctgtcaaaac ctccagtggc tgaaagaaga aatggaaacc aaatttagcc
2461 gttggcagaa ggaacaagag agtatcattc agcagttaca gacgtctctt catgatagga
2521 acaaagaagt ggaggatctt agtgcaacac tgctctgcaa acttggacca gggcagagtg
2581 agatagcaga ggagctgtgc cagcgtctac agcgaaagga aaggatgctg caggaccttc
2641 taagtgatcg aaataaacaa gtgctggaac atgaaatgga gattcaaggc ctgcttcagt
2701 ctgtgagcac cagggagcag gaaagccaag ctgctgcaga gaagttggtg caagccttaa
2761 tggaaagaaa ttcagaatta caggccctgc gccaatattt aggagggaga gactccctga
2821 tgtcccaagc acccatctct aaccaacaag ctgaagttac ccccactggc cgtcttggaa
2881 aacagactga tcaaggttca atgcagatac cttccagaga tgatagcact tcattgactg
2941 ccaaagagga tgtcagcata cccagatcca cattaggaga cttggacaca gttgcagggc
3001 tggaaaaaga actgagtaat gccaaagagg aacttgaact catggctaaa aaagaaagag
3061 aaagtcagat ggaactttct gctctacagt ccatgatagc tgtgcaggaa gaagagctgc
3121 aggtgcaggc tgctgatatg gagtctctga ccaggaacat acagattaaa gaagatctca
3181 taaaggacct gcaaatgcaa ctggttgatc ctgaagacat accagctatg gaacgcctga
3241 cccaggaagt cttacttctt cgggaaaaag ttgcttcagt agaatcccag ggtcaagaaa
3301 tttcaggaaa ccgaagacaa cagttgctgc tgatgctaga aggactagta gatgaacgga
3361 gtcggctcaa tgaggcctta caagcagaga gacagctcta tagcagtctg gtgaagttcc
3421 atgcccatcc agagagctct gagagagacc gaactctgca ggtggaactg gaaggggctc
3481 aggtgttacg cagtcggcta gaagaagttc ttggaagaag cttggagcgc ttaaacaggc
3541 tggagaccct ggccgccatt ggaggtgcag ctgcagggga tgacaccgaa gatacaagca
3601 ctgagttcac tgacagtatt gaggaggagg ctgcacacca tagtcaccag caactatagc
3661 ttcagaagca tttttacttg caagacgatg gacacattcc ccttgggctt tttgtaactg
3721 aaacgcacca cagaagacag ggagtcatcg aagggctgct cggggaggtg gcagggcgga
3781 ggacctgctt gggaagaaac tccaagaaga ttggaatgct tccaaagcaa gaatctttct
3841 cagtgaaatc tcattataca aagagaacct tatgcaacct gacaaaccac tgaggtcatg
3901 gtgactcagt gatcagcaga tggtacttca acagcaatcc cctgtcaaac ctcagaactt
3961 gaggctgaaa cattgcttcc acccaccatc agtgaagatg taactagcat gttacaagag
4021 tgaataatct ggacttcaga gattaagtca ccaatagtga tctcacaagc actcaccgga
4081 actcctataa tgtctccact ttgtccatgc catttagcaa tctcatctcc taaatggact
4141 gtgcctatga ttcttaagga gaaagtgaat cattggtaga tatcctgcac aagcagctgg
4201 actttccagt aatagctttc ttggggctat taggaaaatt aaacaagaaa tgaggctttc
4261 tgggtctgcc tgtatgtctt ctgcataaga caaagaagag acatcgaatc aaccaataag
4321 aagagcccaa ataagcatcc tcaaatcttt tgggatttgg cacttgggga catgagtagt
4381 tgtctgggat acgtcatatt ctcaacagtt tctttgtagt agtaggatca ccttcttata
4441 ataggatcac cttcttgttg ctatagctgt acccgacctt cccttctccc ttgagtgctt
4501 gcatgagctc cacttttcct tttgcttgaa cagcttctcc tgagtcctcc ttaccgatgg
4561 ttgtgacttt aattatatac atctctgtcc ctccagacag atccctctgt cctcactctc
4621 tgatttcatt gaggatcttg ggtgagagag agggacctgc aggatgaaca aatgtctact
4681 ctaagacagc tagattggga ggttggctgg tc
//