LOCUS BC113893 1451 bp mRNA linear HUM 29-JUN-2006
DEFINITION Homo sapiens SLAM family member 6, mRNA (cDNA clone MGC:138859
IMAGE:40083595), complete cds.
ACCESSION BC113893
VERSION BC113893.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1451)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1451)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-FEB-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 19 Row: o Column: 7.
FEATURES Location/Qualifiers
source 1..1451
/db_xref="H-InvDB:HIT000387212"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:138859 IMAGE:40083595"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: GAAGTACA"
gene 1..1451
/gene="SLAMF6"
/gene_synonym="KALI"
/gene_synonym="KALIb"
/gene_synonym="Ly108"
/gene_synonym="NTB-A"
/gene_synonym="NTBA"
/gene_synonym="SF2000"
/db_xref="GeneID:114836"
/db_xref="HGNC:HGNC:21392"
/db_xref="MIM:606446"
CDS 28..1023
/gene="SLAMF6"
/gene_synonym="KALI"
/gene_synonym="KALIb"
/gene_synonym="Ly108"
/gene_synonym="NTB-A"
/gene_synonym="NTBA"
/gene_synonym="SF2000"
/codon_start=1
/product="SLAM family member 6"
/protein_id="AAI13894.1"
/db_xref="GeneID:114836"
/db_xref="HGNC:HGNC:21392"
/db_xref="MIM:606446"
/translation="MLWLFQSLLFVFCFGPGNVVSQSSLTPLMVNGILGESVTLPLEF
PAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKME
DTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADD
NVSFRWEALGNTLSSQPNLTVSWDPRISSEQDYTCIAENAVSNLSFSVSAQKLCEDVK
IQYTDTKMILFMVSGICIVFGFIILLLLVLRKRRDSLSLSTQRTQGPESARNLEYVSV
SPTNNTVYASVTHSNRETEIWTPRENDTITIYSTINHSKESKPTFSRATALDNVV"
BASE COUNT 430 a 343 c 297 g 381 t
ORIGIN
1 caagcaccag tcttcaccgc ggaaagcatg ttgtggctgt tccaatcgct cctgtttgtc
61 ttctgctttg gcccagggaa tgtagtttca caaagcagct taaccccatt gatggtgaac
121 gggattctgg gggagtcagt aactcttccc ctggagtttc ctgcaggaga gaaggtcaac
181 ttcatcactt ggcttttcaa tgaaacatct cttgccttca tagtacccca tgaaaccaaa
241 agtccagaaa tccacgtgac taatccgaaa cagggaaagc gactgaactt cacccagtcc
301 tactccctgc aactcagcaa cctgaagatg gaagacacag gctcttacag agcccagata
361 tccacaaaga cctctgcaaa gctgtccagt tacactctga ggatattaag acaactgagg
421 aacatacaag ttaccaatca cagtcagcta tttcagaata tgacctgtga gctccatctg
481 acttgctctg tggaggatgc agatgacaat gtctcattca gatgggaggc cttgggaaac
541 acactttcaa gtcagccaaa cctcactgtc tcctgggacc ccaggatttc cagtgaacag
601 gactacacct gcatagcaga gaatgctgtc agtaatttat ccttctctgt ctctgcccag
661 aagctttgcg aagatgttaa aattcaatat acagatacca aaatgattct gtttatggtt
721 tctgggatat gcatagtctt cggtttcatc atactgctgt tacttgtttt gaggaaaaga
781 agagattccc tatctttgtc tactcagcga acacagggcc ccgagtccgc aaggaaccta
841 gagtatgttt cagtgtctcc aacgaacaac actgtgtatg cttcagtcac tcattcaaac
901 agggaaacag aaatctggac acctagagaa aatgatacta tcacaattta ctccacaatt
961 aatcattcca aagagagtaa acccactttt tccagggcaa ctgcccttga caatgtcgtg
1021 taagttgctg aaaggcctca gaggaattcg ggaatgacac gtcttctgat cccatgagac
1081 agaacaaaga acaggaagct tggttcctgt tgttcctggc aacagaattt gaatatctag
1141 gataggatga tcacctccag tccttcggac ttaaacctgc ctacctgagt caaacaccta
1201 aggataacat tatttccagc atgtggttca aataatattt tccaatccac ttcaggccaa
1261 aacatgctaa agataacaca ccagcacatt gactctctct ttgataacta agcaaatgga
1321 attatggttg acagagagtt tatgatccag aagacaacca cttctctcct tttagaaagc
1381 agcaggattg acttattgag aaataatgca gtgtgttggt tacatgtgta gtctctggag
1441 ttggatgggc c
//