LOCUS BC109280 3782 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 6, mRNA
(cDNA clone MGC:129915 IMAGE:40028814), complete cds.
ACCESSION BC109280
VERSION BC109280.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3782)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3782)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 13 Row: l Column: 12.
FEATURES Location/Qualifiers
source 1..3782
/db_xref="H-InvDB:HIT000339377"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:129915 IMAGE:40028814"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: GGATCC sequenced from
the reverse primer"
gene 1..3782
/gene="DNAJC6"
/gene_synonym="DJC6"
/gene_synonym="KIAA0473"
/db_xref="GeneID:9829"
/db_xref="HGNC:HGNC:15469"
/db_xref="MIM:608375"
CDS 148..3060
/gene="DNAJC6"
/gene_synonym="DJC6"
/gene_synonym="KIAA0473"
/codon_start=1
/product="DNAJC6 protein"
/protein_id="AAI09281.2"
/db_xref="GeneID:9829"
/db_xref="HGNC:HGNC:15469"
/db_xref="MIM:608375"
/translation="MSLLGSYRKKTSNDGYESLQLVDSNGDLSAGSGGVGGKQRVNAG
AAARSPARQPPDRASTMDSSGASSPDMEPSYGGGLFDMVKGGAGRLFSNLKDNLKDTL
KDTSSRVIQSVTSYTKGDLDFTYVTSRIIVMSFPLDNVDIGFRNQVDDIRSFLDSRHL
DHYTVYNLSPKSYRTAKFHSRVSECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCV
VHCLDGRAASSILVGAMFIFCNLYSTPGPAIRLLYAKRPGIGLSPSHRRYLGYMCDLL
ADKPYRPHFKPLTIKSITVSPIPFFNKQRNGCRPYCDVLIGETKIYSTCTDFERMKEY
RVQDGKIFIPLNITVQGDVVVSMYHLRSTIGSRLQAKVTNTQIFQLQFHTGFIPLDTT
VLKFTKPELDACDVPEKYPQLFQVTLDVELQPHDKVIDLTPPWEHYCTKDVNPSILFS
SHQEHQDTLALGGQAPIDIPPDNPRHYGQSGFFASLCWQDQKSEKSFCEEDHAALVNQ
ESEQSDDELLTLSSPHGNANGDKPHGVKKPSKKQQEPAAPPPPEDVDLLGLEGSAMSN
SFSPPAAPPTNSELLSDLFGGGGAAGPTQAGQSGVEDVFHPSGPASTQSTPRRSATST
SASPTLRVGEGATFDPFGAPSKPSGQDLLGSFLNTSSASSDPFLQPTRSPSPTVHASS
TPAVNIQPDVSGGWDWHAKPGGFGMGSKSAATSPTGSSHGTPTHQSKPQTLDPFADLG
TLGSSSFASKPTTPTGLGGGFPPLSSPQKASPQPMGGGWQQGGAYNWQQPQPKPQPSM
PHSSPQNRPNYNVSFSAMPGGQNERGKGSSNLEGKQKAADFEDLLSGQGFNAHKDKKG
PRTIAEMRKEEMAKEMDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMA
DLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY"
BASE COUNT 1041 a 937 c 869 g 935 t
ORIGIN
1 gtggccgctc cttcttttcc ctcctctttg cgtcatgtcg ggcacttaat tttttttttt
61 ttttaattcc ttcttcagcc ctttccacct tccatctccc ttttcgcttc ccaggttgat
121 tattttctct tttctccggg cttgcccatg agcctcctcg ggagctaccg gaaaaagacc
181 agcaacgatg gttatgaatc tttgcagctg gtggacagta acggggactt aagtgcggga
241 agcggcgggg ttggcggcaa gcagagagtg aacgccgggg cagcggcgcg gagtcccgcc
301 cgacagcctc cggaccgcgc cagcaccatg gacagctcag gtgcctcatc tccagacatg
361 gagcccagct atgggggagg tctctttgac atggtaaaag gaggtgcagg gaggctcttt
421 agtaacctaa aggacaactt gaaagacacc ctcaaagaca catcttctag agtgatacaa
481 tctgtgacca gctacacaaa gggagattta gacttcactt atgttacctc cagaattatt
541 gtgatgtcct ttcctctgga caatgttgac ataggattca ggaatcaggt tgatgacatt
601 cgaagctttt tggattccag acatcttgac cactacacag tatacaatct gtcacctaag
661 tcttatcgaa ctgccaagtt tcacagccgg gtctcagaat gcagttggcc cattaggcag
721 gctcccagtc tgcacaacct ttttgctgtg tgtcggaata tgtataactg gctactgcag
781 aatcccaaaa atgtctgtgt tgtccactgc ttggatggac gggcggcatc atcaattctg
841 gttggtgcta tgttcatttt ctgtaatctc tactctactc ctggcccagc cattcgattg
901 ctatatgcaa agcgaccagg aattggactt tcaccatccc ataggagata cctgggctat
961 atgtgtgacc tactggcaga caagccctac cgccctcact tcaagcctct cacaattaag
1021 tcgatcactg tcagtccaat accctttttc aacaaacaga ggaatggatg tcgcccttac
1081 tgtgatgtac tcattggaga aaccaaaata tattcgactt gcacagattt tgaacgaatg
1141 aaagaatatc gtgtccaaga tggaaaaatc ttcattccct tgaacatcac tgtgcaagga
1201 gacgtggttg tttccatgta tcacttgagg tcaaccattg ggagccggct acaggctaag
1261 gtgaccaaca cacagatatt ccagcttcag tttcacactg gattcatacc actggacaca
1321 acagttttaa agttcaccaa gcctgagtta gatgcatgtg atgtaccaga aaaatatcct
1381 cagctatttc aggtgacact ggatgtagaa ctacagcccc atgacaaagt aatagactta
1441 actccaccat gggaacatta ctgcacaaaa gatgtcaatc ccagcatcct cttctcttct
1501 caccaggaac atcaagatac gctggcctta ggaggacagg ctccaataga tatccctcca
1561 gacaacccca ggcattacgg acaaagtggt ttctttgcct ctctctgttg gcaagatcag
1621 aaatcggaga agtcattctg tgaggaggac cacgctgccc tagtgaatca ggaaagtgag
1681 caatcagatg atgaacttct gacactttcc agtccgcatg gcaatgccaa tggtgacaag
1741 cctcatggag tcaagaagcc cagcaaaaag cagcaggagc cagcagcccc tccaccccct
1801 gaggatgtgg accttttggg cctggaaggg tctgcaatga gtaacagctt ctctccgcca
1861 gcggctcctc ccaccaattc tgaactactg agtgacctgt ttgggggtgg aggtgcagct
1921 ggtcccaccc aggctggaca gtcaggagtg gaagatgtgt ttcatcctag tggacctgcg
1981 tctacccagt caacaccacg ccgctctgcc acctccacct ctgcgtctcc aaccctaaga
2041 gtgggagaag gtgccacctt tgacccattt ggagcacctt ctaaaccatc aggtcaggat
2101 ttgctgggtt cttttctgaa cacatccagt gcttccagtg acccctttct ccagccaaca
2161 agaagtcctt cgcccacagt acatgcttct agtacgcctg ctgtgaacat tcagccagat
2221 gtttctggag gttgggactg gcatgctaaa ccaggaggct ttggaatggg aagcaagtca
2281 gctgccacca gcccaaccgg atcctcgcat ggtactccca cccatcaaag caaaccccag
2341 actctggatc cttttgccga ccttgggaca ctaggtagtt cttcctttgc cagcaaaccc
2401 accacaccaa ctggattggg tggaggattc ccgcctctca gctcgccaca gaaggcgtct
2461 ccccagccta tgggtggcgg gtggcagcag ggaggtgcct acaactggca gcagccacag
2521 cctaagcctc agcccagcat gccccactcc tctccccaga accgacccaa ctacaacgtg
2581 agcttctcag ccatgcctgg gggccagaac gaacgtggga aaggatcaag taatttggaa
2641 gggaaacaaa aagcagctga ttttgaagac ctactctctg gtcaaggttt caatgctcac
2701 aaagacaaaa aggggcctcg gacaatagct gagatgagaa aggaggaaat ggccaaggaa
2761 atggatcctg agaaattaaa gattctggaa tggattgaag gcaaagaaag aaatatcaga
2821 gcccttcttt ccacgatgca taccgtacta tgggctgggg agaccaagtg gaaaccagtt
2881 ggcatggcag acctggtaac accagagcag gtgaagaagg tgtacaggaa ggctgtcctg
2941 gtggtgcacc cagataaagc tactgggcaa ccctatgaac aatacgcaaa gatgattttc
3001 atggagctca atgatgcctg gtctgaattt gaaaaccaag gccaaaagcc cttatattaa
3061 tttatgagct tttccatctc tgctgcagac ctgtgctaat gcttagtgtg tgtcacaatt
3121 ctgaggtttt cgcagatgaa ccaaaaactc cagtaacatg ttttcagtac taaaccgtta
3181 agttactcat gaattaattt ctcattgata aggaatgtgg atgtttggtt tctccaaagt
3241 tcccaccata aaagatccaa agcatgagag gaacttctag tcagatgacc ttgcagaacc
3301 accgcattcc accctgccct ttggggagcc tactcagcat tctacctggg gaaatggaaa
3361 acagaggcca ccacccatga aggcataaca cccatcacat tgtctgagaa taggattaat
3421 gagcaaaagt tatgataata gagttatatg atggtttaat ggtttctaga tttttcttgg
3481 aaagatataa tttgagcagt ggctttatgc agactccaag aacaaaacca ccaggtattt
3541 ttttttaagt aaaaatttac taaggccttt agcataatac tgtaaatgtc ttttggtcaa
3601 gagaactaac aaatataaag gaacttgaaa tgtggggagt gataatagtc cagtgattaa
3661 actacagtcc agtgattacc accaactttc tgactaagct aaaaatgaat gaaaatggtg
3721 gctaaagaaa atagggactc tgaagatgtc gaaatcttta ttcctggtta ggaaggtggg
3781 cc
//