LOCUS BC109279 3780 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 6, mRNA
(cDNA clone MGC:129914 IMAGE:40028812), complete cds.
ACCESSION BC109279
VERSION BC109279.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3780)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3780)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 4, 2006 this sequence version replaced BC109279.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 13 Row: l Column: 11.
FEATURES Location/Qualifiers
source 1..3780
/db_xref="H-InvDB:HIT000339376"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:129914 IMAGE:40028812"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: NA"
gene 1..3780
/gene="DNAJC6"
/gene_synonym="DJC6"
/gene_synonym="KIAA0473"
/db_xref="GeneID:9829"
/db_xref="HGNC:HGNC:15469"
/db_xref="MIM:608375"
CDS 145..3057
/gene="DNAJC6"
/gene_synonym="DJC6"
/gene_synonym="KIAA0473"
/codon_start=1
/product="DNAJC6 protein"
/protein_id="AAI09280.2"
/db_xref="GeneID:9829"
/db_xref="HGNC:HGNC:15469"
/db_xref="MIM:608375"
/translation="MSLLGSYRKKTSNDGYESLQLVDSNGDLSAGSGGVGGKQRVNAG
AAARSPARQPPDRASTMDSSGASSPDMEPSYGGGLFDMVKGGAGRLFSNLKDNLKDTL
KDTSSRVIQSVTSYTKGDLDFTYVTSRIIVMSFPLDNVDIGFRNQVDDIRSFLDSRHL
DHYTVYNLSPKSYRTAKFHSRVSECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCV
VHCLDGRAASSILVGAMFIFCNLYSTPGPAIRLLYAKRPGIGLSPSHRRYLGYMCDLL
ADKPYRPHFKPLTIKSITVSPIPFFNKQRNGCRPYCDVLIGETKIYSTCTDFERMKEY
RVQDGKIFIPLNITVQGDVVVSMYHLRSTIGSRLQAKVTNTQIFQLQFHTGFIPLDTT
VLKFTKPELDACDVPEKYPQLFQVTLDVELQPHDKVIDLTPPWEHYCTKDVNPSILFS
SHQEHQDTLALGGQAPIDIPPDNPRHYGQSGFFASLCWQDQKSEKSFCEEDHAALVNQ
ESEQSDDELLTLSSPHGNANGDKPHGVKKPSKKQQEPAAPPPPEDVDLLGLEGSAMSN
SFSPPAAPPTNSELLSDLFGGGGAAGPTQAGQSGVEDVFHPSGPASTQSTPRRSATST
SASPTLRVGEGATFDPFGAPSKPSGQDLLGSFLNTSSASSDPFLQPTRSPSPTVHASS
TPAVNIQPDVSGGWDWHAKPGGFGMGSKSAATSPTGSSHGTPTHQSKPQTLDPFADLG
TLGSSSFASKPTTPTGLGGGFPPLSSPQKASPQPMGGGWQQGGAYNWQQPQPKPQPSM
PHSSPQNRPNYNVSFSAMPGGQNERGKGSSNLEGKQKAADFEDLLSGQGFNAHKDKKG
PRTIAEMRKEEMAKEMDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMA
DLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY"
BASE COUNT 1041 a 938 c 868 g 933 t
ORIGIN
1 ggccgctcct tcttttccct cctctttgcg tcatgtcggg cacttaattt tttttttttt
61 taattccttc ttcagccctt tccaccttcc atctcccttt tcgcttccca ggttgattat
121 tttctctttt ctccgggctt gcccatgagc ctcctcggga gctaccggaa aaagaccagc
181 aacgatggtt atgaatcttt gcagctggtg gacagtaacg gggacttaag tgcgggaagc
241 ggcggggttg gcggcaagca gagagtgaac gccggggcag cggcgcggag tcccgcccga
301 cagcctccgg accgcgccag caccatggac agctcaggtg cctcatctcc agacatggag
361 cccagctatg ggggaggtct ctttgacatg gtaaaaggag gtgcagggag gctctttagt
421 aacctaaagg acaacttgaa agacaccctc aaagacacat cttctagagt gatacaatct
481 gtgaccagct acacaaaggg agatttagac ttcacttatg ttacctccag aattattgtg
541 atgtcctttc ctctggacaa tgttgacata ggattcagga atcaggttga tgacattcga
601 agctttttgg attccagaca tcttgaccac tacacagtat acaatctgtc acctaagtct
661 tatcgaactg ccaagtttca cagccgggtc tcagaatgca gttggcccat taggcaggct
721 cccagtctgc acaacctttt tgctgtgtgt cggaatatgt ataactggct actgcagaat
781 cccaaaaatg tctgtgttgt ccactgcttg gatggacggg cggcatcatc aattctggtt
841 ggtgctatgt tcattttctg taatctctac tctactcctg gcccagccat tcgattgcta
901 tatgcaaagc gaccaggaat tggactttca ccatcccata ggagatacct gggctatatg
961 tgtgacctac tggcagacaa gccctaccgc cctcacttca agcctctcac aattaagtcg
1021 atcactgtca gtccaatacc ctttttcaac aaacagagga atggatgtcg cccttactgt
1081 gatgtactca ttggagaaac caaaatatat tcgacttgca cagattttga acgaatgaaa
1141 gaatatcgtg tccaagatgg aaaaatcttc attcccttga acatcactgt gcaaggagac
1201 gtggttgttt ccatgtatca cttgaggtca accattggga gccggctaca ggctaaggtg
1261 accaacacac agatattcca gcttcagttt cacactggat tcataccact ggacacaaca
1321 gttttaaagt tcaccaagcc tgagttagat gcatgtgatg taccagaaaa atatcctcag
1381 ctatttcagg tgacactgga tgtagaacta cagccccatg acaaagtaat agacttaact
1441 ccaccatggg aacattactg cacaaaagat gtcaatccca gcatcctctt ctcttctcac
1501 caggaacatc aagatacgct ggccttagga ggacaggctc caatagatat ccctccagac
1561 aaccccaggc attacggaca aagtggtttc tttgcctctc tctgttggca agatcagaaa
1621 tcggagaagt cattctgtga ggaagaccac gctgccctag tgaatcagga aagtgagcaa
1681 tcagatgatg aacttctgac actttccagt ccgcatggca atgccaatgg tgacaagcct
1741 catggagtca agaagcccag caaaaagcag caggagccag cagcccctcc accccctgag
1801 gatgtggacc ttttgggcct ggaagggtct gcaatgagta acagcttctc tccgccagcg
1861 gctcctccca ccaattctga actactgagt gacctgtttg ggggtggagg tgcagctggt
1921 cccacccagg ctggacagtc aggagtggaa gatgtgtttc atcctagtgg acctgcgtct
1981 acccagtcaa caccacgccg ctctgccacc tccacctctg cgtctccaac cctaagagtg
2041 ggagaaggtg ccacctttga cccatttgga gcaccttcta aaccatcagg tcaggatttg
2101 ctgggttctt ttctgaacac atccagtgct tccagtgacc cctttctcca gcccacaaga
2161 agtccttcgc ccacagtaca tgcttctagt acgcctgctg tgaacattca gccagatgtt
2221 tctggaggtt gggactggca tgctaaacca ggaggctttg gaatgggaag caagtcagct
2281 gccaccagcc caaccggatc ctcgcatggt actcccaccc atcaaagcaa accccagact
2341 ctggatcctt ttgccgacct tgggacacta ggtagttctt cctttgccag caaacccacc
2401 acaccaactg gattgggtgg aggattcccg cctctcagct cgccacagaa ggcgtctccc
2461 cagcctatgg gtggcgggtg gcagcaggga ggtgcctaca actggcagca gccacagcct
2521 aagcctcagc ccagcatgcc ccactcctct ccccagaacc gacccaacta caacgtgagc
2581 ttctcagcca tgcctggggg ccagaacgaa cgtgggaaag gatcaagtaa tttggaaggg
2641 aaacaaaaag cagctgattt tgaagaccta ctctctggtc aaggtttcaa tgctcacaaa
2701 gacaaaaagg ggcctcggac aatagctgag atgagaaagg aggaaatggc caaggaaatg
2761 gatcctgaga aattaaagat tctggaatgg attgaaggca aagaaagaaa tatcagagcc
2821 cttctttcca cgatgcatac cgtactatgg gctggggaga ccaagtggaa accagttggc
2881 atggcagacc tggtaacacc agagcaggtg aagaaggtgt acaggaaggc tgtcctggtg
2941 gtgcacccag ataaagctac tgggcaaccc tatgaacaat acgcaaagat gattttcatg
3001 gagctcaatg atgcctggtc tgaatttgaa aaccaaggcc aaaagccctt atattaattt
3061 atgagctttt ccatctctgc tgcagacctg tgctaatgct tagtgtgtgt cacaattctg
3121 aggttttcgc agatgaacca aaaactccag taacatgttt tcagtactaa accgttaagt
3181 tactcatgaa ttaatttctc attgataagg aatgtggatg tttggtttct ccaaagttcc
3241 caccataaaa gatccaaagc atgagaggaa cttctagtca gatgaccttg cagaaccacc
3301 gcattccacc ctgccctttg gggagcctac tcagcattct acctggggaa atggaaaaca
3361 gaggccacca cccatgaagg cataacaccc atcacattgt ctgagaatag gattaatgag
3421 caaaagttat gataatagag ttatatgatg gtttaatggt ttctagattt ttcttggaaa
3481 gatataattt gagcagtggc tttatgcaga ctccaagaac aaaaccacca ggtatttttt
3541 tttaagtaaa aatttactaa ggcctttagc ataatactgt aaatgtcttt tggtcaagag
3601 gactaacaaa tataaaggaa cttgaaatgt ggggagtgat aatagtccag tgattaaact
3661 acagtccagt gattaccacc aactttctga ctaagctaaa aatgaatgaa aatggtggct
3721 aaagaaaata gggactctga agatgtcgaa atctttattc ctggttagga aggtgggcca
//