LOCUS BC072438 2834 bp mRNA linear HUM 08-DEC-2006
DEFINITION Homo sapiens component of oligomeric golgi complex 4, mRNA (cDNA
clone MGC:90212 IMAGE:6011802), complete cds.
ACCESSION BC072438
VERSION BC072438.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2834)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2834)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: e Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41281739.
FEATURES Location/Qualifiers
source 1..2834
/db_xref="H-InvDB:HIT000264882"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:90212 IMAGE:6011802"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2834
/gene="COG4"
/gene_synonym="COD1"
/gene_synonym="DKFZp586E1519"
/db_xref="GeneID:25839"
/db_xref="HGNC:HGNC:18620"
/db_xref="MIM:606976"
CDS 4..2361
/gene="COG4"
/gene_synonym="COD1"
/gene_synonym="DKFZp586E1519"
/codon_start=1
/product="COG4 protein"
/protein_id="AAH72438.1"
/db_xref="GeneID:25839"
/db_xref="HGNC:HGNC:18620"
/db_xref="MIM:606976"
/translation="MADLDSPPKLSGVQQPSEGVGGGRCSEISAELIRSLTELQELEA
VYERLCGEEKVVERELDALLEQQNTIESKMVTLHRMGPNLQLIEGDAKQLAGMITFTC
NLAENVSSKVRQLDLAKNRLYQAIQRADDILDLKFCMDGVQTALRSEDYEQAAAHIHR
YLCLDKSVIELSRQGKEGSMIDANLKLLQEAEQRLKAIVAEKFAIATKEGDLPQVERF
FKIFPLLGLHEEGLRKFSEYLCKQVASKAEENLLMVLGTDMSDRRAAVIFADTLTLLF
EGIARIVETHQPIVETYYGPGRLYTLIKYLQVECDRQVEKVVDKFIKQRDYHQQFRHV
QNNLMRNSTTEKIEPRELDPILTEVTLMNARSELYLRFLKKRISSDFEVGDSMASEEV
KQEHQKCLDKLLNNCLLSCTMQELIGLYVTMEEYFMRETVNKAVALDTYEKGQLTSSM
VDDVFYIVKKCIGRALSSSSIDCLCAMINLATTELESDFRDVLCNKLRMGFPATTFQD
IQRGVTSAVNIMHSSLQQGKFDTKGIESTDEAKMSFLVTLNNVEVCSENISTLKKTLE
SDCTKLFSQGIGGEQAQAKFDSCLSDLAAVSNKFRDLLQEGLTELNSTAIKPQVQPWI
NSFFSVSHNIEEEEFNDYEANDPWVQQFILNLEQQMAEFKASLSPVIYDSLTGLMTSL
VAVELEKVVLKSTFNRLGGLQFDKELRSLIAYLTTVTTWTIRDKFARLSQMATILNLE
RVTEILDYWGPNSGPLTWRLTPAEVRQVLALRIDFRSEDIKRLRL"
BASE COUNT 735 a 718 c 785 g 596 t
ORIGIN
1 aagatggcgg accttgattc gcctccgaag ctgtcagggg tgcagcagcc gtctgagggg
61 gtgggaggtg gccgctgctc cgaaatctcc gctgagctca ttcgctccct gacagagctg
121 caggagctgg aggctgtata cgaacggctc tgcggcgagg agaaagtggt ggagagagag
181 ctggatgctc ttttggaaca gcaaaacacc attgaaagta agatggtcac tctccaccga
241 atgggtccta atctgcagct gattgaggga gatgcaaagc agctggctgg aatgatcacc
301 tttacctgca acctggctga gaatgtgtcc agcaaagttc gtcagcttga cctggccaag
361 aaccgcctct atcaggccat tcagagagct gatgacatct tggacctgaa gttctgcatg
421 gatggagttc agactgcttt gaggagtgaa gattatgagc aggctgcagc acatattcat
481 cgctacttgt gcctggacaa gtcggtcatt gagctcagcc gacagggcaa agaggggagc
541 atgattgatg ccaacctgaa attgctgcag gaagctgagc aacgtctcaa agccattgtg
601 gcagagaagt ttgccattgc caccaaggaa ggtgatctgc cccaggtgga gcgcttcttc
661 aagatcttcc cactgctggg tttgcatgag gagggattaa gaaagttctc ggagtacctt
721 tgcaagcagg tggccagtaa agctgaggag aatctgctca tggtgctggg gacagacatg
781 agtgatcgga gagctgcagt catctttgca gatacactta ctcttctgtt tgaagggatt
841 gcccgcattg tggagaccca ccagccaata gtggagacct attatgggcc agggagactc
901 tataccctga tcaaatatct gcaggtggaa tgtgacagac aggtggagaa ggtggtagac
961 aagttcatca agcaaaggga ctaccaccag cagttccggc atgttcagaa caacctgatg
1021 agaaattcta caacagaaaa aatcgaacca agagaactgg accccatcct gactgaggtc
1081 accctgatga atgcccgcag tgagctatac ttacgcttcc tcaagaagag gattagctct
1141 gattttgagg tgggagactc catggcctca gaggaagtaa agcaagagca ccagaagtgt
1201 ctggacaaac tcctcaataa ctgccttttg agctgtacca tgcaggagct aattggctta
1261 tatgttacca tggaggagta cttcatgagg gagactgtca ataaggctgt ggctctggac
1321 acctatgaga agggccagct gacatccagc atggtggatg atgtcttcta cattgttaag
1381 aagtgcattg ggcgggctct gtccagctcc agcattgact gtctctgtgc catgatcaac
1441 ctcgccacca cagagctgga gtctgacttc agggatgttc tgtgtaataa gctgcggatg
1501 ggctttcctg ccaccacctt ccaggacatc cagcgcgggg tgacaagtgc cgtgaacatc
1561 atgcacagca gcctccagca aggcaaattt gacacaaaag gcatcgagag tactgacgag
1621 gcgaagatgt ccttcctggt gactctgaac aacgtggaag tctgcagtga aaacatctcc
1681 actctgaaga agacactgga gagtgactgc accaagctct tcagccaggg cattggaggg
1741 gagcaggccc aggccaagtt tgacagctgc ctttctgact tggccgccgt gtccaacaaa
1801 ttccgagacc tcttgcagga agggctgacg gagctcaaca gcacagccat caagccacag
1861 gtgcagcctt ggatcaacag ctttttctcc gtctcccaca acatcgagga ggaagaattc
1921 aatgactatg aggccaacga cccttgggta caacagttca tccttaacct ggagcagcaa
1981 atggcagagt tcaaggccag cctgtccccg gtcatctacg acagcctaac cggcctcatg
2041 actagccttg ttgccgtcga gttggagaaa gtggtgctga aatccacctt taaccggctg
2101 ggtggtctgc agtttgacaa ggagctgagg tcactcattg cctaccttac cacggtgacc
2161 acctggacca tccgagacaa gtttgcccgg ctctcccaga tggccaccat cctcaatctg
2221 gagcgggtga ccgagatcct cgattactgg ggacccaatt ccggcccatt gacgtggcgc
2281 ctcacccctg ctgaagtgcg ccaggtgctg gccctgcgga tagacttccg cagtgaagat
2341 atcaagaggc tgcgcctgta gctgcctgga tgagcacacc tggctcatca cacttgcagg
2401 cctgttccct aaggggcccc agccaaggag ctgagcgagg ctgtcgggct tgggggagat
2461 ctgacagccc agacctttct acggctggca gcagagaaac aaagtctgga cccactccat
2521 gctctgccct cagacctggc caggtgatgc tctgggggca gcatctcccc accgagagaa
2581 gcgggctcct aatgaggtgg gaaagccacg gcaggcagcg agcagcccag gccagctttc
2641 tgcatggatg gtcagtctct tgccctcaaa cactacagca aacaagctac ccctgccagt
2701 cctagacaac ttgggtacat ctggggacct agcagttagg cttgactttg aggagaggct
2761 gtgatgttta tgatccctga ataaagctac tccttggaga aaaaaaaaaa aaaaaaaaaa
2821 aaaaaaaaaa aaaa
//