LOCUS       BC068490                3109 bp    mRNA    linear   HUM 17-JUL-2006
DEFINITION  Homo sapiens vascular cell adhesion molecule 1, mRNA (cDNA clone
            MGC:87170 IMAGE:30339170), complete cds.
ACCESSION   BC068490
VERSION     BC068490.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3109)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3109)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-APR-2004) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Dr. Stefan Hansson
            cDNA Library Preparation: Michael Brownstein /  Ted Usdin
            Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 168 Row: k Column: 19
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 18201907.
FEATURES             Location/Qualifiers
     source          1..3109
                     /db_xref="H-InvDB:HIT000263047"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:87170 IMAGE:30339170"
                     /tissue_type="Placenta, pre-eclamptic"
                     /clone_lib="NIH_MGC_148"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..3109
                     /gene="VCAM1"
                     /gene_synonym="CD106"
                     /gene_synonym="INCAM-100"
                     /db_xref="GeneID:7412"
                     /db_xref="HGNC:HGNC:12663"
                     /db_xref="MIM:192225"
     CDS             120..2339
                     /gene="VCAM1"
                     /gene_synonym="CD106"
                     /gene_synonym="INCAM-100"
                     /codon_start=1
                     /product="vascular cell adhesion molecule 1"
                     /protein_id="AAH68490.2"
                     /db_xref="GeneID:7412"
                     /db_xref="HGNC:HGNC:12663"
                     /db_xref="MIM:192225"
                     /translation="MPGKMVVILGASNILWIMFAASQAFKIETTPESRYLAQIGDSVS
                     LTCSTTGCESPFFSWRTQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESR
                     KLEKGIQVEIYSFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMK
                     SQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQ
                     VYISPKNTVISVNPSTKLQEGGSVTMTCSSEGLPAPEIFWSKKLDNGNLQHLSGNATL
                     TLIAMRMEDSGIYVCEGVNLIGKNRKEVELIVQEKPFTVEISPGPRIAAQIGDSVMLT
                     CSVMGCESPSFSWRTQIDSPLSGKVRSEGTNSTLTLSPVSFENEHSYLCTVTCGHKKL
                     EKGIQVELYSFPRDPEIEMSGGLVNGSSVTVSCKVPSVYPLDRLEIELLKGETILENI
                     EFLEDTDMKSLENKSLEMTFIPTIEDTGKALVCQAKLHIDDMEFEPKQRQSTQTLYVN
                     VAPRDTTVLVSPSSILEEGSSVNMTCLSQGFPAPKILWSRQLPNGELQPLSENATLTL
                     ISTKMEDSGVYLCEGINQAGRSRKEVELIIQVTPKDIKLTAFPSESVKEGDTVIISCT
                     CGNVPETWIILKKKAETGDTVLKSIDGAYTIRKAQLKDAGVYECESKNKVGSQLRSLT
                     LDVQGRENNKDYFSPELLVLYFASSLIIPAIGMIIYFARKANMKGSYSLVEAQKSKV"
BASE COUNT          952 a          596 c          690 g          871 t
ORIGIN      
        1 gcggtatctg catcgggcct cactggcttc aggagctgaa taccctccca ggcacacaca
       61 ggtgggacac aaataagggt tttggaacca ctattttctc atcacgacag caacttaaaa
      121 tgcctgggaa gatggtcgtg atccttggag cctcaaatat actttggata atgtttgcag
      181 cttctcaagc ttttaaaatc gagaccaccc cagaatctag atatcttgct cagattggtg
      241 actccgtctc attgacttgc agcaccacag gctgtgagtc cccatttttc tcttggagaa
      301 cccagataga tagtccactg aatgggaagg tgacgaatga ggggaccaca tctacgctga
      361 caatgaatcc tgttagtttt gggaacgaac actcttacct gtgcacagca acttgtgaat
      421 ctaggaaatt ggaaaaagga atccaggtgg agatctactc ttttcctaag gatccagaga
      481 ttcatttgag tggccctctg gaggctggga agccgatcac agtcaagtgt tcagttgctg
      541 atgtataccc atttgacagg ctggagatag acttactgaa aggagatcat ctcatgaaga
      601 gtcaggaatt tctggaggat gcagacagga agtccctgga aaccaagagt ttggaagtaa
      661 cctttactcc tgtcattgag gatattggaa aagttcttgt ttgccgagct aaattacaca
      721 ttgatgaaat ggattctgtg cccacagtaa ggcaggctgt aaaagaattg caagtctaca
      781 tatcacccaa gaatacagtt atttctgtga atccatccac aaagctgcaa gaaggtggct
      841 ctgtgaccat gacctgttcc agcgagggtc taccagctcc agagattttc tggagtaaga
      901 aattagataa tgggaatcta cagcaccttt ctggaaatgc aactctcacc ttaattgcta
      961 tgaggatgga agattctgga atttatgtgt gtgaaggagt taatttgatt gggaaaaaca
     1021 gaaaagaggt ggaattaatt gttcaagaga aaccatttac tgttgagatc tcccctggac
     1081 cccggattgc tgctcagatt ggagactcag tcatgttgac atgtagtgtc atgggctgtg
     1141 aatccccatc tttctcctgg agaacccaga tagacagccc tctgagcggg aaggtgagga
     1201 gtgaggggac caattccacg ctgaccctga gccctgtgag ttttgagaac gaacactctt
     1261 atctgtgcac agtgacttgt ggacataaga aactggaaaa gggaatccag gtggagctct
     1321 actcattccc tagagatcca gaaatcgaga tgagtggtgg cctcgtgaat gggagctctg
     1381 tcactgtaag ctgcaaggtt cctagcgtgt acccccttga ccggctggag attgaattac
     1441 ttaaggggga gactattctg gagaatatag agtttttgga ggatacggat atgaaatctc
     1501 tagagaacaa aagtttggaa atgaccttca tccctaccat tgaagatact ggaaaagctc
     1561 ttgtttgtca ggctaagtta catattgatg acatggaatt cgaacccaaa caaaggcaga
     1621 gtacgcaaac actttatgtc aatgttgccc ccagagatac aaccgtcttg gtcagccctt
     1681 cctccatcct ggaggaaggc agttctgtga atatgacatg cttgagccag ggctttcctg
     1741 ctccgaaaat cctgtggagc aggcagctcc ctaacgggga gctacagcct ctttctgaga
     1801 atgcaactct caccttaatt tctacaaaaa tggaagattc tggggtttat ttatgtgaag
     1861 gaattaacca ggctggaaga agcagaaagg aagtggaatt aattatccaa gttactccaa
     1921 aagacataaa acttacagct tttccttctg agagtgtcaa agaaggagac actgtcatca
     1981 tctcttgtac atgtggaaat gttccagaaa catggataat cctgaagaaa aaagcggaga
     2041 caggagacac agtactaaaa tctatagatg gcgcctatac catccgaaag gcccagttga
     2101 aggatgcggg agtatatgaa tgtgaatcta aaaacaaagt tggctcacaa ttaagaagtt
     2161 taacacttga tgttcaagga agagaaaaca acaaagacta tttttctcct gagcttctcg
     2221 tgctctattt tgcatcctcc ttaataatac ctgccattgg aatgataatt tactttgcaa
     2281 gaaaagccaa catgaagggg tcatatagtc ttgtagaagc acagaaatca aaagtgtagc
     2341 taatgcttga tatgttcaac tggagacact atttatctgt gcaaatcctt gatactgctc
     2401 atcattcctt gagaaaaaca atgagctgag aggcagactt ccctgaatgt attgaacttg
     2461 gaaagaaatg cccatctatg tcccttgctg tgagcaagaa gtcaaagtaa aacttgctgc
     2521 ctgaagaaca gtaactgcca tcaagatgag agaactggag gagttccttg atctgtatat
     2581 acaataacat aatttgtaca tatgtaaaat aaaattatgc catagcaaga ttgcttaaaa
     2641 tagcaacact ctatatttag attgttaaaa taactagtgt tgcttggact attataattt
     2701 aatgcatgtt aggaaaattt cacattaata tttgctgaca gctgaccttt gtcatctttc
     2761 ttctatttta ttccctttca caaaatttta ttcctatata gtttattgac aataatttca
     2821 ggttttgtaa agatgccggg ttttatattt ttatagacaa ataataagca aagggagcac
     2881 tgggttgact ttcaggtact aaatacctca acctatggta taatggttga ctgggtttct
     2941 ctgtatagta ctggcatggt acggagatgt ttcacgaagt ttgttcatca gactcctgtg
     3001 caactttccc aatgtggcct aaaaatgcaa cttcttttta ttttcttttg taaatgttta
     3061 ggtttttttg tatagtaaag tgataatttc tggaaaaaaa aaaaaaaaa
//