LOCUS       BC064485                1375 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens lymphocyte antigen 9, mRNA (cDNA clone IMAGE:5483404),
            complete cds.
ACCESSION   BC064485
VERSION     BC064485.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1375)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1375)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-DEC-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Dr. Daniel McVicar, DBS/NCI
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 50 Row: i Column: 7
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 55925577
            This clone has the following problem: The cds is short compared to
            the longest cds in the locus.
FEATURES             Location/Qualifiers
     source          1..1375
                     /db_xref="H-InvDB:HIT000261405"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:5483404"
                     /tissue_type="Blood, natural killer cell"
                     /clone_lib="NIH_MGC_106"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..1375
                     /gene="LY9"
                     /gene_synonym="CD229"
                     /gene_synonym="hly9"
                     /gene_synonym="mLY9"
                     /gene_synonym="SLAMF3"
                     /db_xref="GeneID:4063"
                     /db_xref="HGNC:HGNC:6730"
                     /db_xref="MIM:600684"
     CDS             2..583
                     /gene="LY9"
                     /gene_synonym="CD229"
                     /gene_synonym="hly9"
                     /gene_synonym="mLY9"
                     /gene_synonym="SLAMF3"
                     /codon_start=1
                     /product="lymphocyte antigen 9"
                     /protein_id="AAH64485.1"
                     /db_xref="GeneID:4063"
                     /db_xref="HGNC:HGNC:6730"
                     /db_xref="MIM:600684"
                     /translation="MVAPKSHTDDWAPGPFSSKPQRSQLQIFSSVLQTSLLFLLMGLR
                     ASGKDSAPTVVSGILGGSVTLPLNISVDTEIENVIWIGPKNALAFARPKENVTIMVKS
                     YLGRLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYAPFIEKLSV
                     HVIEGDHRTLLEGSGLESIISTLAEPRVSVREG"
BASE COUNT          297 a          426 c          355 g          297 t
ORIGIN      
        1 catggtggca ccaaagagtc acacagatga ctgggctcct gggcctttct ccagtaagcc
       61 acagaggagt cagctgcaaa tattctcttc tgttctacag acctctctcc tcttcctgct
      121 catgggacta agagcctctg gaaaggactc agccccaaca gtggtgtcag ggatcctagg
      181 gggttccgtg actctccccc taaacatctc agtagacaca gagattgaga acgtcatctg
      241 gattggtccc aaaaatgctc ttgctttcgc acgtcccaaa gaaaatgtaa ccattatggt
      301 caaaagctac ctgggccgac tagacatcac caagtggagt tactccctgt gcatcagcaa
      361 tctgactctg aatgatgcag gatcctacaa agcccagata aaccaaagga attttgaagt
      421 caccactgag gaggaattca ccctgttcgt ctatgcacca tttattgaaa agttgtccgt
      481 ccacgtcatc gagggtgacc accgcacact cctggagggc agcggcctgg agtccatcat
      541 cagcaccctg gctgagccac gtgtgagcgt gcgggagggc taggccctcg cccccacctg
      601 ccactggaga ccgctccgcc atccccacct caccgccgcg cagcagagct ggaagggtcc
      661 tgccgatggg accctgccag gcccagtgcc actgcccccc gaggctgcta gacgtgggcg
      721 ttaggcgtgt cccacccacc cgccgcctcc catggcacgt cgggaacacc ggagccgcca
      781 acttggagac tcctggtctg tgaagagccg ctgacgcccg caggaaccgg gctgggcctt
      841 gtgtgccagt ggggtttgtg cttggtcttt ctccgcttgg atttgcttat ttattgcatt
      901 gctggtagag actcccaagc ctgtccaccc tgcaaagact cctcgggcag catgcgggtc
      961 ccgcacactg cacccatttc ctggatgtcc cctgcaggcg cgggaggcca tccgggcctg
     1021 ctggctgcgg ccccctctca gccaggcctg gctcagccca ctgcgtggga ggtcaccggc
     1081 cactccccga ggagctggga tccccgggat gcaggcccac agtgcggggc tgcacccatg
     1141 atgcggagct ggcctccaac cctgcgggcc gcgccaggca ccaactcagt gtttgtcagt
     1201 gtttgttttt ccaagaaatg gttcaaattg ctgctcagat ttttaaattt actgtagctg
     1261 ccagtgtaca cgtgtggacc ccattttatt tttacaccaa tttggtgaaa atgctgcttt
     1321 cctcagcctc cccacaatta aactgcacat ggtctctaaa aaaaaaaaaa aaaaa
//