LOCUS BC057871 3558 bp mRNA linear ROD 15-JUL-2006
DEFINITION Mus musculus receptor-interacting serine-threonine kinase 4, mRNA
(cDNA clone MGC:67753 IMAGE:5294197), complete cds.
ACCESSION BC057871
VERSION BC057871.1
KEYWORDS MGC.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 3558)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3558)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-SEP-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lothar Hennighausen Ph.D., Priscilla Furth
Ph.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 123 Row: k Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24475774.
FEATURES Location/Qualifiers
source 1..3558
/organism="Mus musculus"
/mol_type="mRNA"
/strain="NMRI"
/db_xref="taxon:10090"
/clone="MGC:67753 IMAGE:5294197"
/tissue_type="Mammary tumor. WAP-Tag model. 5 months old,
gross tissue."
/clone_lib="NCI_CGAP_Mam4"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3558
/gene="Ripk4"
/gene_synonym="ANKK2"
/gene_synonym="DIk"
/gene_synonym="PKK"
/gene_synonym="RIP4"
/db_xref="GeneID:72388"
/db_xref="MGI:MGI:1919638"
CDS 10..2370
/gene="Ripk4"
/gene_synonym="ANKK2"
/gene_synonym="DIk"
/gene_synonym="PKK"
/gene_synonym="RIP4"
/codon_start=1
/product="receptor-interacting serine-threonine kinase 4"
/protein_id="AAH57871.1"
/db_xref="GeneID:72388"
/db_xref="MGI:MGI:1919638"
/translation="MEGEGRGRWALGLLRTFDAGEFAGWEKVGSGGFGQVYKVRHVHW
KTWLAIKCSPSLHVDDRERMELLEEAKKMEMAKFRYILPVYGICQEPVGLVMEYMETG
SLEKLLASEPLPWDLRFRIVHETAVGMNFLHCMSPPLLHLDLKPANILLDAHYHVKIS
DFGLAKCNGMSHSHDLSMDGLFGTIAYLPPERIREKSRLFDTKHDVYSFAIVIWGVLT
QKKPFADEKNILHIMMKVVKGHRPELPPICRPRPRACASLIGLMQRCWHADPQVRPTF
QEITSETEDLCEKPDEEVKDLAHEPGEKSSLESKSEARPESSRLKRASAPPFDNDCSL
SELLSQLDSGISQTLEGPEELSRSSSECKLPSSSSGKRLSGVSSVDSAFSSRGSLSLS
FEREASTGDLGPTDIQKKKLVDAIISGDTSRLMKILQPQDVDLVLDSSASLLHLAVEA
GQEECVKWLLLNNANPNLTNRKGSTPLHMAVERKGRGIVELLLARKTSVNAKDEDQWT
ALHFAAQNGDEASTRLLLEKNASVNEVDFEGRTPMHVACQHGQENIVRTLLRRGVDVG
LQGKDAWLPLHYAAWQGHLPIVKLLAKQPGVSVNAQTLDGRTPLHLAAQRGHYRVARI
LIDLCSDVNICSLQAQTPLHVAAETGHTSTARLLLHRGAGKEALTSEGYTALHLAAQN
GHLATVKLLIEEKADVMARGPLNQTALHLAAARGHSEVVEELVSADLIDLSDEQGLSA
LHLAAQGRHSQTVETLLKHGAHINLQSLKFQGGQSSAATLLRRSKT"
BASE COUNT 838 a 891 c 993 g 836 t
ORIGIN
1 gcgcacgcga tggagggcga gggccggggc cggtgggctc tggggctgct gcgcaccttc
61 gacgccggcg aattcgcagg ctgggagaag gtgggctcgg gcggcttcgg gcaggtgtac
121 aaggtgcgcc atgtgcactg gaagacgtgg ctcgcgatca agtgctcgcc cagtctgcac
181 gtcgacgaca gggaacgaat ggagctcctg gaggaagcta agaagatgga gatggccaag
241 ttccgataca ttctacctgt gtacggcata tgccaggaac ctgtcggctt ggtcatggag
301 tacatggaga caggctccct ggagaagctg ctggcctcag agccattgcc ttgggacctg
361 cgctttcgca tcgtgcacga gacagccgtg ggcatgaact tcctgcattg catgtctccg
421 ccactgctgc acctagacct gaagccagcg aacatcctgc tggatgccca ctaccatgtc
481 aagatttctg actttgggct ggccaagtgc aatggcatgt cccactctca tgacctcagc
541 atggatggcc tgtttggtac aatcgcttac ctccctccag agcgaattcg tgagaagagc
601 cgcttgtttg acaccaaaca tgatgtatac agcttcgcca ttgtgatctg gggtgtgctt
661 acacagaaga agccatttgc agatgaaaag aacatcctac acatcatgat gaaagtggta
721 aagggccacc gcccagagct gccacccatc tgcagacccc ggccgcgtgc ctgtgccagc
781 ctgatagggc tcatgcaacg gtgctggcat gcagacccac aggtgcggcc caccttccaa
841 gaaattacct ctgaaacaga agacctttgt gagaagcctg atgaggaggt gaaagacctg
901 gctcatgagc caggcgagaa aagctctcta gagtccaaga gtgaggccag gcccgagtcc
961 tcacgcctca agcgcgcctc tgctcccccc ttcgataacg actgcagtct ctccgagttg
1021 ctgtcacagt tggactctgg gatctcccag actcttgaag gccccgaaga gctcagccga
1081 agttcctctg aatgcaagct cccatcgtcc agcagtggca agaggctctc gggggtgtcc
1141 tcagtggact cagccttttc ctccagagga tcgctgtcac tgtcttttga gcgggaagct
1201 tcaacaggcg acctgggccc cacagacatc cagaagaaga agctagtgga tgccatcata
1261 tcaggggaca ccagcaggct gatgaagatc ctacagcccc aagatgtgga cttggttcta
1321 gacagcagtg ccagcctgct gcacctggct gtggaggccg gacaggagga gtgtgtcaag
1381 tggctgctgc ttaacaatgc caaccccaac ctgaccaaca ggaagggctc tacaccactg
1441 catatggctg tggagcggaa gggacgtgga attgtggagc tactgctagc ccggaagacc
1501 agtgtcaatg ccaaggatga agaccagtgg actgccctgc actttgcagc ccagaatggg
1561 gatgaggcca gcacaaggct gctgctagag aagaatgctt ctgtcaatga ggtggacttt
1621 gagggccgaa cacccatgca tgtagcctgc cagcatggac aggagaacat tgtgcgcacc
1681 ctgctccgcc gtggtgtgga tgtgggcctg cagggaaagg atgcctggtt gcctctgcac
1741 tatgctgcct ggcagggcca ccttcccatt gttaagctgc tagccaagca gcctggggtg
1801 agtgtgaatg cccagacact agacgggagg acacccctgc acctggctgc tcagaggggg
1861 cattaccgtg tggctcgcat tctcattgac ctgtgctctg atgttaacat ctgcagccta
1921 caggcacaga cacctctgca tgttgctgca gagactggac acactagtac tgccaggcta
1981 ctcttgcatc gtggtgctgg caaggaggct ttgacctcag agggctatac tgccttgcac
2041 ctggcagccc agaatggaca cctggctact gtcaagctgc tcatagagga gaaggctgat
2101 gtgatggctc ggggtcccct gaatcagaca gcactgcacc tggctgctgc ccgtggacac
2161 tcagaggtgg tagaagagct ggtcagtgct gacctcattg acctgtctga tgagcagggc
2221 ctcagcgcac tgcacctggc tgctcagggc aggcattcac agactgtgga gacactgctc
2281 aaacatggag cacacatcaa cttgcagagt ctcaagttcc aaggaggcca gagctctgct
2341 gccacgttgc tccgacgcag caagacctag cttgccacca caaaaccagg gctccgtgta
2401 ggcttctgga ccatccttgt ttcctcatgg ggacagaatg gtcctgggac actgctcacc
2461 ctgttggtgg cctgcccata cactgaccaa gcagaggcta atggacaagg caggagtagc
2521 tgtcttgggg cacagtagcc aaagtgtctg atgtcagatg ggactaggtt ggtgtcatgt
2581 cactgtggta ttgattggct gctgatgcag gccttttatg acaaagccta tacaagaatg
2641 tctcctctgt ccatagagca agccatttct gcttgcttgg agcatgacat cttcagtaga
2701 gatgtgggaa gggcagtgtc ctttgtcttc tcattgtgat gggcagagta gctgtctctg
2761 aaggcatagt gggttcttaa tatatgagtg acatggtagc tttgcttgag acctgtgagg
2821 atctggctgc tggagtctag aaagggagtg attataaagc cacagggttg gtcctaacac
2881 tggacagcct tgccaacatg aaactgctgt ttcatttggt attttggttt tggtttttag
2941 ttttgatgtc taggtcacca tgcctcgttc ccccgatttc cctgctgagt tctcagctaa
3001 aatgtcagag ccatatatat aaaagttacc ggaaattttt ttgtaaatgg gttttatact
3061 aaaagttgtt tagtcaaaca gtttgctctt tcaggctctc ttggtgaagt gatggtttgg
3121 gccaagggct ttgctgactt gccctttagc aacttctgct atgttccagt tacagtagat
3181 gaatgtgggc agaggtggcc attggagatt gttgtactct gaggagtcag attcgatagc
3241 cttttgttgt accttcccca tttctgttct gaacactgtc actgtagaga tgacctgtgt
3301 gcaaacatgc tatagcatgg tatgtgacac agaatgatat taatgtactg tgtactttga
3361 catgaatcat ggacaggata ctctttcatg acaggaagta gtggagctgg ctatgtttta
3421 atatgcctca atttgtcttc actgcttccc tctcttgtgt aaaacacggg gaccatagga
3481 gatctgtttt atgtcaataa aggactccgc ctacttttgg aaaaaaaaaa aaaaaaaaaa
3541 aaaaaaaaaa aaaaaaaa
//