LOCUS BC032446 2951 bp mRNA linear HUM 11-AUG-2006 DEFINITION Homo sapiens cold shock domain containing E1, RNA-binding, mRNA (cDNA clone MGC:40318 IMAGE:5111213), complete cds. ACCESSION BC032446 VERSION BC032446.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2951) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2951) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 64 Row: d Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 56117849. FEATURES Location/Qualifiers source 1..2951 /db_xref="H-InvDB:HIT000041538" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:40318 IMAGE:5111213" /tissue_type="Cervix, carcinoma" /clone_lib="NIH_MGC_12" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2951 /gene="CSDE1" /gene_synonym="D1S155E" /gene_synonym="RP5-1000E10.3" /gene_synonym="UNR" /db_xref="GeneID:7812" /db_xref="HGNC:HGNC:29905" /db_xref="MIM:191510" CDS 449..2752 /gene="CSDE1" /gene_synonym="D1S155E" /gene_synonym="RP5-1000E10.3" /gene_synonym="UNR" /codon_start=1 /product="cold shock domain containing E1, RNA-binding" /protein_id="AAH32446.1" /db_xref="GeneID:7812" /db_xref="HGNC:HGNC:29905" /db_xref="MIM:191510" /translation="MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSE RQARLFFHCSQYNGNLQDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEILPEERMNG QEVFYLTYTPEDVEGNVQLETGDKINFVIDNNKHTGAVSARNIMLLKKKQARCQGVVC AMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEFTIKDRNGKEVATDVRLLP QGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFGDKDTKSK VTLLEGDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEAREMGVIAAMRDGFGFIKC VDRDVRMFFHFSEILDGNQLHIADEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSFHSH SDHRFLGTVEKEATFSNPKTTSPNKGKEKEAEDGIIAYDDCGVKLTIAFQAKDVEGST SPQIGDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHD KEIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNKVSAEKVNKTHSVNGITEEADPTIY SGKVIRPLRSVDPTQTEYQGMIEIVEEGDMKGEVYPFGIVGMANKGDCLQKGESVKFQ LCVLGQNAQTMAYNITPLRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIELQA GDEVEFSVILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLM VLRQPRGPDNSMGFGAERKIRQAGVID" BASE COUNT 907 a 572 c 691 g 781 t ORIGIN 1 ccacgcgtcc ggggccgtgc tgcttatggc ggcgctggag agggggcgct gagctgttgg 61 gtatgaagtg taacagaaca gactttacca cctgaaactg ctgcttcaag ttcagatcag 121 gcaaggaaca aacctcgtaa caactaacaa gaccaaagaa gagtacactt aagttgaaga 181 cacaacactt gatctgaaac aagaagtttg tgcctactca acagctttga aagagcactt 241 cccaacgctg ctagtagtct ttgttttctt cagtgctgta ctgtgagatt gcccggtaca 301 gcagcagttg tattctttat tagcttggta gatcattttc tctcgctctt ttttttaata 361 ctagcaactt tcatcctttg aaacgtgtgc tgaaaaagaa gaatcagcaa atactactga 421 aagtgcaata tttgagtatc actgcgagat gagctttgat ccaaaccttc tccacaacaa 481 tggacataat gggtacccta atggtacttc agcagcactg cgtgaaactg gggttattga 541 aaaactgtta acctcttacg gatttattca gtgttcagaa cgtcaagcta gacttttctt 601 ccactgttca cagtataatg gcaacctgca agacttaaaa gtaggagatg atgttgaatt 661 tgaagtatca tcggaccgac ggactgggaa acccattgct gttaaactgg tgaagataaa 721 acaagaaatc ctccctgaag aacgaatgaa tggacaagaa gtgttttatc tgacttacac 781 ccctgaagat gtcgaaggga acgttcagct ggaaactgga gataaaataa actttgtaat 841 tgataacaat aaacatactg gtgctgtaag tgctcgcaac attatgctgt tgaaaaagaa 901 acaagcccgc tgtcagggag tagtttgtgc catgaaggag gcatttggct ttattgaaag 961 aggtgatgtt gtaaaagaga tattctttca ctatagtgaa tttaagggtg acttagaaac 1021 cttacagcct ggcgatgatg tggaattcac aatcaaggac agaaatggta aagaagttgc 1081 aacagatgtc agactattgc ctcaaggaac agtcattttt gaagatatca gcattgaaca 1141 ttttgaagga actgtaacca aagttatccc aaaagtaccc agtaaaaacc agaatgaccc 1201 attgccagga cgcatcaaag ttgactttgt gatccctaaa gaacttccct ttggagacaa 1261 agatacgaaa tccaaggtga ccctgctgga aggtgaccat gttaggttta atatttcaac 1321 agaccgacgt gacaaattag agcgagcaac caatatagaa gttctgtcaa atacatttca 1381 gttcactaat gaagcccgag aaatgggtgt gattgctgcc atgagagatg gttttggttt 1441 catcaagtgt gtggatcgtg atgttcgtat gttcttccac ttcagtgaaa ttctggatgg 1501 gaaccagctc catattgcag atgaagtaga gtttactgtg gttcctgata tgctctctgc 1561 tcaaagaaat catgctatta ggattaaaaa acttcccaag ggcacggttt catttcattc 1621 ccattcagat caccgttttc tgggcacggt agaaaaagaa gccacttttt ccaatcctaa 1681 aaccactagc ccaaataaag gcaaagagaa ggaggctgag gatggcatta ttgcttatga 1741 tgactgtggg gtgaaactga ctattgcttt tcaagccaag gatgtggaag gatctacttc 1801 tcctcaaata ggagataagg ttgaatttag tattagtgac aaacagaggc ctggacagca 1861 ggttgcaact tgtgtgcgac ttttaggtcg taattctaac tccaagaggc tcttgggtta 1921 tgtggcaact ctgaaggata attttggatt tattgaaaca gccaatcatg ataaggaaat 1981 ctttttccat tacagtgagt tctctggtga tgttgatagc ctggaactgg gggacatggt 2041 cgagtatagc ttgtccaaag gcaaaggcaa caaagtcagt gcagaaaaag tgaacaaaac 2101 acactcagtg aatggcatta ctgaggaagc tgatcccacc atttactctg gcaaagtaat 2161 tcgccccctg aggagtgttg atccaacaca gactgagtac caaggaatga ttgagattgt 2221 ggaggagggc gatatgaaag gtgaggtcta tccatttggc atcgttggga tggccaacaa 2281 aggggattgc ctgcagaaag gggagagcgt caagttccaa ttgtgtgtcc tgggccaaaa 2341 tgcacaaact atggcttaca acatcacacc cctgcgcagg gccacagtgg aatgtgtgaa 2401 agatcagttt ggcttcatta actatgaagt aggagatagc aagaagctct ttttccatgt 2461 gaaagaagtt caggatggca ttgagctaca ggcaggagat gaggtggagt tctcagtgat 2521 tcttaatcag cgcactggca agtgcagcgc ctgtaatgtt tggcgagtct gtgagggccc 2581 caaggctgtt gcagctcctc gacctgatcg gttggtcaat cgcttgaaga atatcactct 2641 ggatgatgcc agtgctcctc gcctaatggt tcttcgtcag ccaaggggac cagataactc 2701 aatggggttt ggtgcagaaa gaaagatccg tcaagctggt gtcattgact aaccacatcc 2761 acaaagcaca ccattaatcc actatgatca agttgggggg aatctggtga agggttctga 2821 atatctccct cttcatccct cccgaaatct ggaatactta ttctattgag ctattacacc 2881 agttttaaca ccttcctcgt gttatgttta aaaaaataaa taaatttaag aaaaccaaaa 2941 aaaaaaaaaa a //