LOCUS BC027920 2131 bp mRNA linear HUM 27-OCT-2006
DEFINITION Homo sapiens lymphocyte antigen 9, mRNA (cDNA clone MGC:34782
IMAGE:5225850), complete cds.
ACCESSION BC027920
VERSION BC027920.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2131)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2131)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: n Column: 17.
FEATURES Location/Qualifiers
source 1..2131
/db_xref="H-InvDB:HIT000091408"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34782 IMAGE:5225850"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2131
/gene="LY9"
/gene_synonym="CD229"
/gene_synonym="hly9"
/gene_synonym="mLY9"
/gene_synonym="SLAMF3"
/db_xref="GeneID:4063"
/db_xref="HGNC:HGNC:6730"
/db_xref="MIM:600684"
CDS 431..1648
/gene="LY9"
/gene_synonym="CD229"
/gene_synonym="hly9"
/gene_synonym="mLY9"
/gene_synonym="SLAMF3"
/codon_start=1
/product="LY9 protein"
/protein_id="AAH27920.1"
/db_xref="GeneID:4063"
/db_xref="HGNC:HGNC:6730"
/db_xref="MIM:600684"
/translation="MKSVKVSENFSCNITLMCSVKGAEKSVLYSWTPREPHASESNGG
SILTVSRTPCDPDLPYICTAQNPVSQRSSLPVHVGQFCTDPGASRGGTTGETVVGVLG
EPVTLPLALPACRDTEKVVWLFNTSIISKEREEAATADPLIKSRDPYKNRVWVSSQDC
SLKISQLKIEDAGPYHAYVCSEASSVTSMTHVTLLIYRPERNTKLWIGLFLMVCLLCV
GIFSWCIWKRKGRCSVPAFCSSQAEAPADTPEPTAGHTLYSVLSQGYEKLDTPLRPAR
QQPTPTSDSSSDSNLTTEEDEDRPEVHKPISGRYEVFDQVTQEGAGHDPAPEGQADYD
PVTPYVTEVESVVGENTVYAQVFNLQGKTPVSQKEESSATIYCSIRKPQVVPPPQQND
LEIPESPTYENFT"
BASE COUNT 594 a 588 c 501 g 448 t
ORIGIN
1 cagtaagcca cagaggagtc agctgcaaat attctcttct gttctacaga cctctctcct
61 cttcctgctc atgggactaa gagcctctgg aaaggactca gccccaacag tggtgtcagg
121 gatcctaggg ggttccgtga ctctccccct aaacatctca gtagacacag agattgagaa
181 cgtcatctgg attggtccca aaaatgctct tgctttcgca cgtcccaaag aaaatgtaac
241 cattatggtc aaaagctacc tgggccgact agacatcacc aagtggagtt actccctgtg
301 catcagcaat ctgactctga atgatgcagg atcctacaaa gcccagataa accaaaggaa
361 ttttgaagtc accactgagg aggaattcac cctgttcgtc tatgagtagc tgcaggagcc
421 ccaagtcacc atgaagtctg tgaaggtgtc tgagaacttc tcctgtaaca tcactctaat
481 gtgctccgtg aagggggcag agaaaagtgt tctgtacagc tggaccccaa gggaacccca
541 tgcttctgag tccaatggag gctccattct taccgtctcc cgaacaccat gtgacccaga
601 cctgccatac atctgcacag cccagaaccc cgtcagccag agaagctccc tccctgtcca
661 tgttgggcag ttctgtacag atccaggagc ctccagagga ggaacaacgg gggagactgt
721 ggtaggggtc ctgggagagc cagtcaccct gccacttgca ctcccagcct gccgggacac
781 agagaaggtt gtctggttgt ttaacacatc catcattagc aaagagaggg aagaagcagc
841 aacggcagat ccactcatta aatccaggga tccttacaag aacagggtgt gggtctccag
901 ccaggactgc tccctgaaga tcagccagct gaagatagag gacgccggcc cctaccatgc
961 ctacgtgtgc tcagaggcct ccagcgtcac cagcatgaca catgtcaccc tgctcatcta
1021 ccgacctgag agaaacacaa agctttggat tgggttgttc ctgatggttt gccttctgtg
1081 cgttgggatc ttcagctggt gcatttggaa gcgaaaagga cggtgttcag tcccagcctt
1141 ctgttccagc caagctgagg ccccagcgga tacaccagaa cccacagctg gccacacgct
1201 atactctgtg ctctcccaag gatatgagaa gctggacact cccctcaggc ctgccaggca
1261 acagcctaca cccacctcag acagcagctc tgacagcaac ctcacaactg aggaggatga
1321 ggacaggcct gaggtgcaca agcccatcag tggaagatat gaggtgtttg accaggtcac
1381 tcaggagggc gctggacatg acccagcccc tgagggccaa gcagactatg atcccgtcac
1441 tccatatgtc acggaagttg agtctgtggt tggagagaac accgtgtatg cacaagtgtt
1501 caacttacag ggaaagaccc cagtttctca gaaggaagag agctcagcca caatctactg
1561 ctccatacgg aaacctcagg tggtgccacc accacaacag aatgatcttg agattcctga
1621 aagtcctacc tatgaaaatt tcacctgaaa ggaaaagcag ctgctgcctc tctcctggga
1681 ccgtggggtt ggaaagtcag ctggacctca tggggcctgg ggctcgcaga cagaagcacc
1741 tcagaatttc cttcagtgcc tcagagatgc ctggatgtgg cccctccccc tccttctcac
1801 ccttaaggac tcccaaaccc attaatagtt cagacacagg ctccttcttg gagcctatgg
1861 gcttcagatg tctttgcccc atttgtcacc tcgcacactt atagcgtttc ctcctcgaaa
1921 ttctaccaag actggtcaaa tgttgctgag gggcctggac cagctgtcct ttacaccacc
1981 ttctcaacac tgctgaaaag aacccaagag aattgtcaca catgacacaa gatgtacata
2041 atatcatgct cactgcagtg ttatttaaaa taaaaggcag gaaataaaaa aaaaaaaaaa
2101 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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