LOCUS BC025406 1717 bp mRNA linear HUM 04-AUG-2008 DEFINITION Homo sapiens phosphodiesterase 4D interacting protein, mRNA (cDNA clone IMAGE:4813248), complete cds. ACCESSION BC025406 VERSION BC025406.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1717) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1717) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 46 Row: d Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 50658074 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1717 /db_xref="H-InvDB:HIT000039934" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4813248" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..1717 /gene="PDE4DIP" /gene_synonym="MMGL" /db_xref="GeneID:9659" /db_xref="HGNC:HGNC:15580" /db_xref="MIM:608117" CDS 336..1268 /gene="PDE4DIP" /gene_synonym="MMGL" /codon_start=1 /product="phosphodiesterase 4D interacting protein" /protein_id="AAH25406.1" /db_xref="GeneID:9659" /db_xref="HGNC:HGNC:15580" /db_xref="MIM:608117" /translation="MKGTDSGSCCRRRCDFGCCCRASRRAHYTPYRSGDATRTPQSPR QTPSRERRRPEPAGSWAAAAEEEEAAAAATPWMRDYFAEDDGEMVPRTSHTAAFLSDT KDRGPPVQSQIWRSGEKVPFVQTYSLRAFEKPPQVQTQALRDFEKHLNDLKKENFSLK LRIYFLEERMQQKYEASREDIYKRNTELKVEVESLKRELQDKKQHLDKTWADVENLNS QNEAELRRQFEERQQETEHVYELLENKMQLLQEESRLAKNEAARMAALVEAEKECNLE LSEKLKGVTKNWEDVPGDQVKPDQYTEALAQRDK" BASE COUNT 498 a 390 c 518 g 311 t ORIGIN 1 agcgggaaaa aaaacttatc tgaggttgga aataaagaga aggtgacatt ggagcggata 61 gaaaggaaga aacggcgtgg gatctgggaa tgaggcagtg ggtggagaga gaatggggag 121 acgacagagg atgaagggca gctgagtgtg tctgcgggag aaggaccaaa gcaatctggg 181 cggagcaggt ggcagaggca gccgcggagg aggcccaggg aactgacggg gatgctcagc 241 caggcccaga ggatgcgccc tggcagtccc ggaagacacc aggaaaacaa gcaggaaccg 301 tagctaggac tggggtggcc aggcccagga aatccatgaa gggcacagac agcgggtcct 361 gctgccgccg ccgatgcgac tttggctgct gctgtcgcgc gtcccgccgg gctcactaca 421 cgccttaccg gtccggggac gcgacgcgaa cccctcagtc cccacggcag accccgagcc 481 gggaaagacg gcgcccggag ccagccggga gctgggcagc agcggccgag gaggaagaag 541 cagctgcggc ggccacaccc tggatgagag attattttgc agaggatgat ggggagatgg 601 tacccagaac gagtcacaca gcagcttttc ttagtgacac taaagatcga ggccctccag 661 tgcagtcaca gatctggaga agtggtgaaa aggtcccgtt tgtgcagaca tattccttga 721 gagcatttga gaaaccccct caggtacaga cccaggctct tcgagacttt gagaagcacc 781 tcaatgacct gaagaaggag aacttcagcc tcaagctgcg catctacttc ctggaggagc 841 gcatgcaaca gaagtatgag gccagccggg aggacatcta caagcggaac actgagctga 901 aggttgaagt ggagagcttg aaacgagaac tccaggacaa gaaacagcat ctggataaaa 961 catgggctga tgtggagaat ctcaacagtc agaatgaagc tgagctccga cgccagtttg 1021 aggagcgaca gcaggagacg gagcatgttt atgagctctt ggagaataag atgcagcttc 1081 tgcaggagga atccaggcta gcaaagaatg aagctgcgcg gatggcagct ctggtggaag 1141 cagagaagga gtgtaacctg gagctctcag agaaactgaa gggagtcacc aaaaactggg 1201 aagatgtacc aggagaccag gtcaagcccg accaatacac tgaggccctg gcccagaggg 1261 acaagtaggt gccttcggtg ctctttttgt cgcttgtctt ttgcccattc tcaaggcata 1321 cagcagctgt cctgttccct ttcaaggact gacagtagga gcttcactat ttctaagact 1381 ttatgggccc acaaccgaag acattctttt cagggttgaa ttttcagtgg tatccattat 1441 gaaaactcac ttcatggatt cagtgggcaa atagcggcaa gcaagagaca tggattcact 1501 tattcagcaa acatttactg ggcatgccac atgccagata ccgggctaag tatctggcat 1561 gtgttacaga aacaaaagac ctaaatcttg tcaccaagaa acatgttaca tgattttaat 1621 aagttccctg atagaagagc atggggtgct ctggggaaat attggagggt catccattcc 1681 acattaaaag agcaagttgc caaaaaaaaa aaaaaaa //