LOCUS BC017773 905 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens triggering receptor expressed on myeloid cells 1, mRNA (cDNA clone MGC:22242 IMAGE:4692680), complete cds. ACCESSION BC017773 VERSION BC017773.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 905) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 905) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 36 Row: m Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31543823. FEATURES Location/Qualifiers source 1..905 /db_xref="H-InvDB:HIT000038123" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:22242 IMAGE:4692680" /tissue_type="Lung" /clone_lib="NIH_MGC_77" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..905 /gene="TREM1" /gene_synonym="TREM-1" /db_xref="GeneID:54210" /db_xref="HGNC:HGNC:17760" /db_xref="MIM:605085" CDS 46..750 /gene="TREM1" /gene_synonym="TREM-1" /codon_start=1 /product="triggering receptor expressed on myeloid cells 1" /protein_id="AAH17773.1" /db_xref="GeneID:54210" /db_xref="HGNC:HGNC:17760" /db_xref="MIM:605085" /translation="MRKTRLWGLLWMLFVSELRAATKLTEEKYELKEGQTLDVKCDYT LEKFASSQKAWQIIRDGEMPKTLACTERPSKNSHPVQVGRIILEDYHDHGLLRVRMVN LQVEDSGLYQCVIYQPPKEPHMLFDRIRLVVTKGFSGTPGSNENSTQNVYKIPPTTTK ALCPLYTSPRTVTQAPPKSTADVSTPDSEINLTNVTDIIRVPVFNIVILLAGGFLSKS LVFSVLFAVTLRSFVP" BASE COUNT 258 a 224 c 224 g 199 t ORIGIN 1 gtcccgggag ccctcagcag cagttggagc tggtgcacag gaaggatgag gaagaccagg 61 ctctgggggc tgctgtggat gctctttgtc tcagaactcc gagctgcaac taaattaact 121 gaggaaaagt atgaactgaa agaggggcag accctggatg tgaaatgtga ctacacgcta 181 gagaagtttg ccagcagcca gaaagcttgg cagataataa gggacggaga gatgcccaag 241 accctggcat gcacagagag gccttcaaag aattcccatc cagtccaagt ggggaggatc 301 atactagaag actaccatga tcatggttta ctgcgcgtcc gaatggtcaa ccttcaagtg 361 gaagattctg gactgtatca gtgtgtgatc taccagcctc ccaaggagcc tcacatgctg 421 ttcgatcgca tccgcttggt ggtgaccaag ggtttttcag ggacccctgg ctccaatgag 481 aattctaccc agaatgtgta taagattcct cctaccacca ctaaggcctt gtgcccactc 541 tataccagcc ccagaactgt gacccaagct ccacccaagt caactgccga tgtctccact 601 cctgactctg aaatcaacct tacaaatgtg acagatatca tcagggttcc ggtgttcaac 661 attgtcattc tcctggctgg tggattcctg agtaagagcc tggtcttctc tgtcctgttt 721 gctgtcacgc tgaggtcatt tgtaccctag gcccacgaac ccacgagaat gtcctctgac 781 ttccagccac atccatctgg cagttgtgcc aagggaggag ggaggaggta aaaggcaggg 841 agttaataac atgaattaaa tctgtaatca ccgccaaaaa aaaaaaaaaa aaaaaaaaaa 901 aaaaa //