LOCUS BC015219 2581 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens RanBP-type and C3HC4-type zinc finger containing 1,
mRNA (cDNA clone MGC:17759 IMAGE:3877587), complete cds.
ACCESSION BC015219
VERSION BC015219.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2581)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2581)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC015219.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: b Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14043037.
FEATURES Location/Qualifiers
source 1..2581
/db_xref="H-InvDB:HIT000037060"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17759 IMAGE:3877587"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2581
/gene="RBCK1"
/gene_synonym="RBCK2"
/gene_synonym="RNF54"
/gene_synonym="UBCE7IP3"
/gene_synonym="XAP4"
/gene_synonym="ZRANB4"
/db_xref="GeneID:10616"
/db_xref="HGNC:HGNC:15864"
CDS 452..1954
/gene="RBCK1"
/gene_synonym="RBCK2"
/gene_synonym="RNF54"
/gene_synonym="UBCE7IP3"
/gene_synonym="XAP4"
/gene_synonym="ZRANB4"
/codon_start=1
/product="RanBP-type and C3HC4-type zinc finger containing
1"
/protein_id="AAH15219.2"
/db_xref="GeneID:10616"
/db_xref="HGNC:HGNC:15864"
/translation="MALSLTRAVAGGDEQVAMKCAIWLAEQRVPLSVQLKPEVSPTQD
IRLWVSVEDAQMHTVTIWLTVRPDMTVASLKDMVFLDYGFPPVLQQWVIGQRLARDQE
TLHSHGVRQNGDSAYLYLLSARNTSLNPQELQRERQLRMLEDLGFKDLTLQPRGPLEP
GPPKPGVPQEPGRGQPDAVPEPPPVGWQCPGCTFINKPTRPGCEMCCRARPEAYQVPA
SYQPDEEERARLAGEEEALRQYQQRKQQQQEGNYLQHVQLDQRSLVLNTEPAECPVCY
SVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVSCPFIDNTYSCSGKLLEREIKAL
LTPEDYQRFLDLGISIAENRSAFSYHCKTPDCKGWCFFEDDVNEFTCPVCFHVNCLLC
KAIHEQMNCKEYQEDLALRAQNDVAARQTTEMLKVMLQQGEAMRCPQCQIVVQKKDGC
DWIRCTVCHTEICWVTKGPRWGPGGPGDTSGGCRCRVNGIPCHPSCQNCH"
BASE COUNT 549 a 800 c 780 g 452 t
ORIGIN
1 gaagaactgg ggcctcccgg gaggagagag ggctttgcct tgaaacccgg gacgccaggg
61 gcgctcccgc aagtgggggt cctccgggac ttggaacgcc ccggctgggt ggtgtccggg
121 cgtcctttcc ccgcttcttc ccacctcggc tggtcccgtt tcctcctgcg cccagtgcgg
181 acctgtctcg gcgcccgctg ccctctcacc gccccacgca ggatcccggc ctggtcaccg
241 ggcagtgtga tgcttcccga ctgccgcggg gacagcgagg cacacacagg gcttgggccg
301 cgccggaggc cacacggcct ggctgagttg ctcctggtct cccgcctctc ccaggcgacc
361 cggaggtagc atttcccagg aggcacggtc ccccccaggg ggatgggcac agccacgcca
421 gatggacgag aagaccaaga aagcagagga aatggccctg agcctcaccc gagcagtggc
481 gggcggggat gaacaggtgg caatgaagtg tgccatctgg ctggcagagc aacgggtgcc
541 cctgagtgtg caactgaagc ctgaggtctc cccaacgcag gacatcaggc tgtgggtgag
601 cgtggaggat gctcagatgc acaccgtcac catctggctc acagtgcgcc ctgatatgac
661 agtggcgtct ctcaaggaca tggtttttct ggactatggc ttcccaccag tcttgcagca
721 gtgggtgatt gggcagcggc tggcacgaga ccaggagacc ctgcactccc atggggtgcg
781 gcagaatggg gacagtgcct acctctatct gctgtcagcc cgcaacacct ccctcaaccc
841 tcaggagctg cagcgggagc ggcagctgcg gatgctggaa gatctgggct tcaaggacct
901 cacgctgcag ccgcggggcc ctctggagcc aggcccccca aagcccgggg tcccccagga
961 acccggacgg gggcagccag atgcagtgcc tgagccccca ccggtgggct ggcagtgccc
1021 cgggtgcacc ttcatcaaca agcccacgcg gcctggctgt gagatgtgct gccgggcgcg
1081 ccccgaggcc taccaggtcc ccgcctcata ccagcccgac gaggaggagc gagcgcgcct
1141 ggcgggcgag gaggaggcgc tgcgtcagta ccagcagcgg aagcagcagc agcaggaggg
1201 gaactacctg cagcacgtcc agctggacca gaggagcctg gtgctgaaca cggagcccgc
1261 cgagtgcccc gtgtgctact cggtgctggc gcccggcgag gccgtggtgc tgcgtgagtg
1321 tctgcacacc ttctgcaggg agtgcctgca gggcaccatc cgcaacagcc aggaggcgga
1381 ggtctcctgc cccttcattg acaacaccta ctcgtgctcg ggcaagctgc tggagaggga
1441 gatcaaggcg ctcctgaccc ctgaggatta ccagcgattt ctagacctgg gcatctccat
1501 tgctgaaaac cgcagtgcct tcagctacca ttgcaagacc ccagattgca agggatggtg
1561 cttctttgag gatgatgtca atgagttcac ctgccctgtg tgtttccacg tcaactgcct
1621 gctctgcaag gccatccatg agcagatgaa ctgcaaggag tatcaggagg acctggccct
1681 gcgggctcag aacgatgtgg ctgcccggca gacgacagag atgctgaagg tgatgctgca
1741 gcagggcgag gccatgcgct gcccccagtg ccagatcgtg gtacagaaga aggacggctg
1801 cgactggatc cgctgcaccg tctgccacac cgagatctgc tgggtcacca agggcccacg
1861 ctggggccct gggggcccag gagacaccag cgggggctgc cgctgcaggg taaatgggat
1921 tccttgccac ccaagctgtc agaactgcca ctgagctaaa gatggtgggg ccacatgctg
1981 acccagcccc acatccacat tctgttagaa tgtagctcag ggagcttcgt ggacggcctt
2041 gcttgctgta gcgttgtagg ggccctgcct gcactgcggt tgtccacggt cacatctgcc
2101 ccagtgcctt tgtccttccc ttggggcttg ccggccagac ttctctcccc tgcggctccc
2161 acctctgcct gaccccagcc ttaaacatag cccctggcca gaggccttgc tgggtggagc
2221 ctctgtgtga ctccatactc ctcccaccac aacactcatc tgtcaaacac caagcactct
2281 cagcctcccc gccttcagct gtcagctttc tggggctaac ttctctgcct ttgtggttgg
2341 aggcctgagg cctcttggaa ctcttgctaa cctgttcaga gccaggaagg agactgcaca
2401 gttttgaaag cacagcccgt caggtccggc tctgcgtctc cctctctgca gcctgtgtaa
2461 gctattataa ttaaaatggt tttccgggaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2521 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2581 a
//