LOCUS BC009293 1262 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CD7 molecule, mRNA (cDNA clone MGC:16622
IMAGE:4120480), complete cds.
ACCESSION BC009293
VERSION BC009293.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1262)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1262)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC009293.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: c Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61676094.
FEATURES Location/Qualifiers
source 1..1262
/db_xref="H-InvDB:HIT000034262"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16622 IMAGE:4120480"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1262
/gene="CD7"
/gene_synonym="GP40"
/gene_synonym="LEU-9"
/gene_synonym="Tp40"
/gene_synonym="TP41"
/db_xref="GeneID:924"
/db_xref="HGNC:HGNC:1695"
/db_xref="MIM:186820"
CDS 54..776
/gene="CD7"
/gene_synonym="GP40"
/gene_synonym="LEU-9"
/gene_synonym="Tp40"
/gene_synonym="TP41"
/codon_start=1
/product="CD7 molecule"
/protein_id="AAH09293.1"
/db_xref="GeneID:924"
/db_xref="HGNC:HGNC:1695"
/db_xref="MIM:186820"
/translation="MAGPPRLLLLPLLLALARGLPGALAAQEVQQSPHCTTVPVGASV
NITCSTSGGLRGIYLRQLGPQPQDIIYYEDGVVPTTDRRFRGRIDFSGSQDNLTITMH
RLQLSDTGTYTCQAITEVNVYGSGTLVLVTEEQSQGWHRCSDAPPRASALPAPPTGSA
LPDPQTASALPDPPAASALPAALAVISFLLGLGLGVACVLARTQIKKLCSWRDKNSAA
CVVYEDMSHSRCNTLSSPNQYQ"
BASE COUNT 242 a 468 c 351 g 201 t
ORIGIN
1 cccagagagg ctcagctgca ctcgcccggc tgggagagct gggtgtgggg aacatggccg
61 ggcctccgag gctcctgctg ctgcccctgc ttctggcgct ggctcgcggc ctgcctgggg
121 ccctggctgc ccaagaggtg cagcagtctc cccactgcac gactgtcccc gtgggagcct
181 ccgtcaacat cacctgctcc accagcgggg gcctgcgtgg gatctacctg aggcagctcg
241 ggccacagcc ccaagacatc atttactacg aggacggggt ggtgcccact acggacagac
301 ggttccgggg ccgcatcgac ttctcagggt cccaggacaa cctgactatc accatgcacc
361 gcctgcagct gtcggacact ggcacctaca cctgccaggc catcacggag gtcaatgtct
421 acggctccgg caccctggtc ctggtgacag aggaacagtc ccaaggatgg cacagatgct
481 cggacgcccc accaagggcc tctgccctcc ctgccccacc gacaggctcc gccctccctg
541 acccgcagac agcctctgcc ctccctgacc cgccagcagc ctctgccctc cctgcggccc
601 tggcggtgat ctccttcctc ctcgggctgg gcctgggggt ggcgtgtgtg ctggcgagga
661 cacagataaa gaaactgtgc tcgtggcggg ataagaattc ggcggcatgt gtggtgtacg
721 aggacatgtc gcacagccgc tgcaacacgc tgtcctcccc caaccagtac cagtgaccca
781 gtgggcccct gcacgtcccg cctgtggtcc ccccagcacc ttccctgccc caccatgccc
841 cccaccctgc cacacccctc accctgctgt cctcccacgg ctgcagcaga gtttgaaggg
901 cccagccgtg cccagctcca agcagacaca caggcagtgg ccaggcccca cggtgcttct
961 cagtggacaa tgatgcctcc tccgggaagc cttccctgcc cagcccacgc cgccaccggg
1021 aggaagcctg actgtccttt ggctgcatct cccgaccatg gccaaggagg gcttttctgt
1081 gggatgggcc tgggcacgcg gccctctcct gtcagtgccg gcccacccac cagcaggccc
1141 ccaaccccca ggcagcccgg cagaggacgg gaggagacca gtcccccacc cagccgtacc
1201 agaaataaag gcttctgtgc ttcctttaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1261 aa
//