LOCUS BC002939 2262 bp mRNA linear HUM 28-SEP-2006
DEFINITION Homo sapiens chloride channel CLIC-like 1, mRNA (cDNA clone
MGC:11343 IMAGE:3953674), complete cds.
ACCESSION BC002939
VERSION BC002939.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2262)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2262)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC002939.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: m Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147325.
FEATURES Location/Qualifiers
source 1..2262
/db_xref="H-InvDB:HIT000031301"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:11343 IMAGE:3953674"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2262
/gene="CLCC1"
/gene_synonym="KIAA0761"
/gene_synonym="MCLC"
/gene_synonym="RP11-475E11.6"
/db_xref="GeneID:23155"
/db_xref="HGNC:HGNC:29675"
CDS 109..1614
/gene="CLCC1"
/gene_synonym="KIAA0761"
/gene_synonym="MCLC"
/gene_synonym="RP11-475E11.6"
/codon_start=1
/product="CLCC1 protein"
/protein_id="AAH02939.1"
/db_xref="GeneID:23155"
/db_xref="HGNC:HGNC:29675"
/translation="MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQA
KYGISGEKDVSPDLSCADEISECYHKLDSLTYKIDECEKKKREDYESQSNPVFRRYLN
KILIEAGKLGLFHDFETWKWRFEDSFGVDPYNVLMVLLCLLCIVVLVATELWTYVRWY
TQLRRVLIISFLFSLGWNWMYLYKLAFAQHQAEVAKMEPLNNVCAKKMDWTGSIWEWF
RSSWTYKDDPCQKYYELLLVNPIWLVPPTKALAVTFTTFVTEPLKHIGKGTGEFIKAL
MKEIPALLHLPVLIIMALAILSFCYGAGKSVHVLRHIGGPESEPPQALRPRDRRRQEE
IDYRPDGGAGDADFHYRGQMGPTEQGPYAKTYEGRREILRERDVDLRFQTGNKSPEVL
RAFDVPDAEAREHPTVVPSHKSPVLDTKPKETGGILGEGTPKESSTESSQSAKPVSGQ
DTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGPRGQDPVSSPCG"
BASE COUNT 648 a 466 c 570 g 578 t
ORIGIN
1 gcacgctgaa accctgggcg gcggcaagct gtgcgacctc ttctgcggcc ggcctgggca
61 ggtgtcttcc tcgagaggca ggcaggggat cccggaccct tatacaggat gctgtgttct
121 ttgctccttt gtgaatgtct gttgctggta gctggttatg ctcatgatga tgactggatt
181 gaccccacag acatgcttaa ctatgatgct gcttcaggaa caatgagaaa atctcaggca
241 aaatatggta tttcagggga aaaggatgtc agtcctgact tgtcatgtgc tgatgaaata
301 tcagaatgtt atcacaaact tgattcttta acttataaga ttgatgagtg tgaaaagaaa
361 aagagggaag actatgaaag tcaaagcaat cctgttttta ggagatactt aaataagatt
421 ttaattgaag ctggaaagct tggacttttt catgattttg aaacatggaa gtggcgattc
481 gaagattcct ttggagtgga tccatataat gtgttaatgg tacttctttg tctgctctgc
541 atcgtggttt tagtggctac cgagctgtgg acatatgtac gttggtacac tcagttgaga
601 cgtgttttaa tcatcagctt tctgttcagt ttgggatgga attggatgta tttatataag
661 ctagcttttg cacagcatca ggctgaagtc gccaagatgg agccattaaa caatgtgtgt
721 gccaaaaaga tggactggac tggaagtatc tgggaatggt ttagaagttc atggacctat
781 aaggatgacc catgccaaaa atactatgag ctcttactag tcaaccctat ttggttggtc
841 ccaccaacaa aggcacttgc agttacattc accacatttg taacggagcc attgaagcat
901 attggaaaag gaactgggga atttattaaa gcactcatga aggaaattcc agcgctgctt
961 catcttccag tgctgataat tatggcatta gccatcctga gtttctgcta tggtgctgga
1021 aaatcagttc atgtgctgag acatataggc ggtcctgaga gcgaacctcc ccaggcactt
1081 cggccacggg atagaagacg gcaggaggaa attgattata gacctgatgg tggagcaggt
1141 gatgccgatt tccattatag gggccaaatg ggccccactg agcaaggccc ttatgccaaa
1201 acgtatgagg gtagaagaga gattttgaga gagagagatg ttgacttgag atttcagact
1261 ggcaacaaga gccctgaagt gctccgggca tttgatgtac cagacgcaga ggcacgagag
1321 catcccacgg tggtacccag tcataaatca cctgttttgg atacaaagcc caaggagaca
1381 ggtggaatcc tgggggaagg cacaccgaaa gaaagcagta ctgaaagcag ccagtcggcc
1441 aagcctgtct ctggccaaga cacatcaggg aatacagaag gttcacccgc agcggaaaag
1501 gcccagctca agtctgaagc cgcaggcagc ccagaccaag gcagcacata cagccccgca
1561 agaggtgtgg ctggaccacg tggacaggat ccggtcagca gcccctgtgg ctagaggaac
1621 accagcacaa acgacagcct caagtctcct tcgagcttta tatccatttg gggatgaagt
1681 ctactttgac agctagcaag gcgacatgca actgttgttg aatgatgaca gcaattcagg
1741 aaagacttaa atatgaaagc aaattgaaca catcgggtgt ttgttatcag aaaagagatg
1801 agatgagata agacttgttt attgactagc caatatgtca ttaaaattaa ggtttatatt
1861 gtgaagcttt tttgaaattt tacttttttt tgagagtttt gctctgtcac ccaggctgga
1921 gtgaggtggt acaatctcgg ctcactgcaa cctccacctc ccaggttcaa gagattctcc
1981 tgcctcagtc tcccgagtag ctaggattac agatgtgcat caccatgcct ggctaatttt
2041 tgtatttttt agtagagatg gggtttcacc atgttggtca ggctggtctc gaactcctga
2101 cctcaagtga cccgcccttg tcggcctccc aaagtgctgg gattacaggc atgagccatt
2161 gtgcccagcc tatatctact tgagcctgtg tgcccactga agagatgaag aataaaagcc
2221 taagctctca tcaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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