LOCUS AM408378 1209 bp DNA linear BCT 27-JUN-2007
DEFINITION Sinorhizobium meliloti partial rpsA gene for ribosomal protein S1,
strain LMG 6133.
ACCESSION AM408378
VERSION AM408378.1
KEYWORDS ribosomal protein S1; rpsA gene.
SOURCE Sinorhizobium meliloti
ORGANISM Sinorhizobium meliloti
Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
REFERENCE 1 (bases 1 to 1209)
AUTHORS Martens M.G.Y.
JOURNAL Submitted (13-OCT-2006) to the INSDC. Martens M.G.Y., Biochemistry,
Physiology & Microbiology, Ghent University, Lab of Microbiology,
K.L. Ledeganckstraat 35, B-9000 Gent, BELGIUM.
REFERENCE 2
AUTHORS Martens M., Weidner S., Linke B., de Vos P., Gillis M., Willems A.
TITLE A prototype taxonomic microarray targeting the rpsA housekeeping
gene permits species identification within the rhizobial genus
Ensifer
JOURNAL Syst. Appl. Microbiol. 30(5), 390-400(2007).
PUBMED 17291704
FEATURES Location/Qualifiers
source 1..1209
/organism="Sinorhizobium meliloti"
/strain="LMG 6133"
/mol_type="genomic DNA"
/db_xref="taxon:382"
CDS <1..>1209
/codon_start=1
/transl_table=11
/gene="rpsA"
/product="ribosomal protein S1"
/db_xref="GOA:A5PG08"
/db_xref="InterPro:IPR003029"
/db_xref="InterPro:IPR012340"
/db_xref="InterPro:IPR022967"
/db_xref="UniProtKB/TrEMBL:A5PG08"
/protein_id="CAL63590.1"
/translation="GFTVDLDGAVAFLPRSQVDIRPIRDVTPLMHNPQPFEILKMDKR
RGNIVVSRRTVLEESRAEQRSEIVQNLEEGQVVEGVVKNITDYGAFVDLGGIDGLLHV
TDMAWRRVNHPSEILNIGQQVKVQIIRINQETHRISLGMKQLESDPWDGIGAKYPVGK
KISGTVTNITDYGAFVELEPGIEGLIHISEMSWTKKNVHPGKILSTSQEVDVVVLEVD
PTKRRISLGLKQTLENPWQAFAHSHPAGTEVEGEVKNKTEFGLFIGLDGDVDGMVHLS
DLDWNRPGEQVIEEFNKGDVVRAVVLDVDVDKERISLGIKQLGRDAVGEAAASGELRK
NAVVSAEVIGVNDGGIEVRLVNHEDVTAFIRRADLSRDRDEQRPERFSVGQTVDARVT
NFSKKDRKIQL"
BASE COUNT 251 a 393 c 356 g 209 t
ORIGIN
1 ggcttcaccg tcgatctcga cggcgccgta gccttcctgc cgcgttcgca ggtcgacatc
61 cgtccgatcc gcgacgtgac gccgctgatg cacaacccgc agcccttcga aatcctcaag
121 atggacaagc gccgcggcaa catcgtcgtt tcgcgccgca cggttctcga agagtcccgc
181 gccgagcagc gttctgaaat cgttcagaac ctcgaggaag gccaggttgt cgagggtgtc
241 gtcaagaaca tcaccgatta cggtgcgttc gtcgacctcg gcggcatcga cggcctgctg
301 cacgtcaccg acatggcatg gcgccgcgtc aaccatccgt cggagatcct gaacatcggc
361 cagcaggtca aggttcagat catccgcatc aaccaggaaa cccaccgcat ctcgctcggc
421 atgaagcagc tcgagtccga tccgtgggat ggcatcggtg cgaagtatcc ggtcggcaag
481 aagatctccg gtaccgtcac gaacatcacc gactacggtg cgttcgtcga gctggagccg
541 ggcatcgaag gcctgataca catctccgaa atgtcctgga cgaagaagaa cgttcacccc
601 ggcaagatcc tgtccacgag ccaggaagtc gacgtggtcg ttctcgaagt cgacccgacc
661 aagcgccgca tctcgctcgg cctcaagcag acgctcgaga acccgtggca ggccttcgcg
721 catagccatc cggctggcac ggaagtcgaa ggcgaagtca agaacaagac cgaattcggt
781 ctgttcatcg gcctcgatgg cgatgtcgac ggcatggtcc acctctccga cctcgactgg
841 aaccgcccgg gcgagcaggt catcgaagaa ttcaacaagg gcgacgtcgt ccgtgctgtc
901 gttctcgatg tggacgtcga caaggagcgc atctcgctcg gcatcaagca gctcggccgt
961 gatgcggtcg gtgaagctgc cgcttccggc gaactgcgca agaacgccgt cgtttcggct
1021 gaagtcatcg gcgtcaacga tggcggcatc gaagtgcggc tcgtcaacca cgaggacgtc
1081 accgccttca tccgtcgcgc cgacctctcg cgcgatcgcg acgaacagcg tccggagcgt
1141 ttctcggtcg gccagaccgt cgatgcgcgg gtcaccaact tctccaagaa ggaccgcaag
1201 atccagctg
//