LOCUS AM087423 923 bp DNA linear BCT 13-FEB-2007 DEFINITION Pseudomonas putida partial putative oprD gene, strain CFBP 2066. ACCESSION AM087423 VERSION AM087423.1 KEYWORDS oprD gene. SOURCE Pseudomonas putida ORGANISM Pseudomonas putida Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 923) AUTHORS Chevalier S. JOURNAL Submitted (23-SEP-2005) to the INSDC. Chevalier S., Laboratory of Cold Microbiology, Rouen University, 55 St Germain Street, Evreux-27000, FRANCE. REFERENCE 2 AUTHORS Chevalier S., Bodilis J., Jaouen T., Barray S., Feuilloley M., Orange N. TITLE Sequence diversity of the OprD homologue protein from environmental fluorescent Pseudomonas strains. JOURNAL Unpublished. REFERENCE 3 AUTHORS Chevalier S., Bodilis J., Jaouen T., Barray S., Feuilloley M.G.J., Orange N. TITLE Sequence diversity of the OprD protein of environmental Pseudomonas strains JOURNAL Environ. Microbiol. 9(3), 824-835(2007). PUBMED 17298381 FEATURES Location/Qualifiers source 1..923 /organism="Pseudomonas putida" /strain="CFBP 2066" /mol_type="genomic DNA" /country="France" /db_xref="taxon:303" CDS <1..>923 /codon_start=1 /transl_table=11 /gene="oprD" /product="putative OprD protein" /function="basic amino acid uptake" /db_xref="GOA:Q3LAH6" /db_xref="InterPro:IPR005318" /db_xref="InterPro:IPR023614" /db_xref="UniProtKB/TrEMBL:Q3LAH6" /protein_id="CAJ32345.1" /translation="LNXKTRMLYFSRDFRNNDSGKSRVEETGLGFLGTFESGFTQGTV GFGVDAIGMLGLKLDSGKGRAGTGLFPTASDGRSQDDYSEGGGAVKLRVSNTVLKFGD QFTALPVLATDDSRLLPEVAEGGLITSNEIDGLTLHAGHFTALNAQAQTYHDSLRLTE ANVFGGTYAINDNLSTSVYYSRIEDHFRKWYGNINWALPISDKQGLVFDFNIYDTKSI GDNLTGAFVSKADGSNELDNIAASLSAAYNIGAHTFTLAYQKVSGDGDYAYGVDGGGT IFLANSVARSDFNAEDEKSWQARYDLNFAEYG" BASE COUNT 202 a 316 c 249 g 155 t ORIGIN 1 ctgaacttna aaacccgcat gctgtacttc agccgtgact tccgtaacaa cgacagcggc 61 aagagccgcg tcgaagaaac cggcctgggc ttcctgggca ccttcgaatc gggcttcacc 121 cagggcaccg taggcttcgg cgttgacgcc atcggcatgc tgggcctgaa actggacagc 181 ggcaaaggcc gcgccggcac cggcctgttc ccgactgcct ccgatggccg ttcgcaagat 241 gactactccg aaggcggcgg tgcagtaaaa ctgcgcgtgt ccaataccgt gctgaagttt 301 ggcgaccagt tcaccgccct gccggtactg gccaccgacg atagccgact gctgccagag 361 gtcgctgaag gtggcctgat caccagcaac gaaatcgatg gcctcaccct gcacgccggt 421 cacttcaccg cgctgaacgc ccaggctcag acttaccacg acagcctgcg cctgaccgag 481 gccaacgtct tcggtggcac ctatgccatc aacgacaacc tcagcaccag cgtctactac 541 tcgcgcattg aagaccactt ccgcaagtgg tacggcaaca tcaactgggc gctgccgatc 601 agcgacaagc aaggcctggt gttcgacttc aacatctatg acaccaagtc catcggcgac 661 aacctgaccg gcgcattcgt cagcaaggct gacggcagca acgaactgga caacattgca 721 gccagcctct cggccgccta caacattggc gcccacacct tcaccctggc ttaccagaag 781 gtcagcggcg acggcgacta cgcttacggc gtcgacggtg gcggcaccat cttcctggcc 841 aactccgttg cccgttccga cttcaacgcc gaagacgaga agtcctggca ggcgcgctac 901 gacctgaact tcgccgaata cgg //