LOCUS AM087421 1139 bp DNA linear BCT 13-FEB-2007 DEFINITION Pseudomonas cichorii partial putative oprD gene, strain CFBP 2101. ACCESSION AM087421 VERSION AM087421.1 KEYWORDS oprD gene. SOURCE Pseudomonas cichorii ORGANISM Pseudomonas cichorii Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 1139) AUTHORS Chevalier S. JOURNAL Submitted (23-SEP-2005) to the INSDC. Chevalier S., Laboratory of Cold Microbiology, Rouen University, 55 St Germain Street, Evreux-27000, FRANCE. REFERENCE 2 AUTHORS Chevalier S., Bodilis J., Jaouen T., Barray S., Feuilloley M., Orange N. TITLE Sequence diversity of the OprD homologue protein from environmental fluorescent Pseudomonas strains. JOURNAL Unpublished. REFERENCE 3 AUTHORS Chevalier S., Bodilis J., Jaouen T., Barray S., Feuilloley M.G.J., Orange N. TITLE Sequence diversity of the OprD protein of environmental Pseudomonas strains JOURNAL Environ. Microbiol. 9(3), 824-835(2007). PUBMED 17298381 FEATURES Location/Qualifiers source 1..1139 /organism="Pseudomonas cichorii" /strain="CFBP 2101" /mol_type="genomic DNA" /country="France" /db_xref="taxon:36746" CDS <1..>1139 /codon_start=3 /transl_table=11 /gene="oprD" /product="putative OprD protein" /function="basic amino acid uptake" /db_xref="GOA:Q3LAH8" /db_xref="InterPro:IPR005318" /db_xref="InterPro:IPR023614" /db_xref="UniProtKB/TrEMBL:Q3LAH8" /protein_id="CAJ32343.1" /translation="AQMATAAPFVSDQSEAKGFVDGSTLDLKLRNYYYDRDKKNTTGP NRRDDKDWTQGLWVNYSSGYTQGTVGVGVKAFGYFGLKLDGQRKYSGSGNLVTSSDGT NEDSFGKGGGAVKFRVSKTELKVGDMQPANPVFGVGGSRLLPQTASGISLQSSELKGL DVEAGHFYSGTSQDDTSHSGGIFSAYSGVEAKSADYVGGKYALTDSLGVAFYAAKLED IWNQYYGNVNYALPLSGDQSLAFDANIYRTVDEGSANAGSISNXTYSASAAYSFLAAH TVTIAFQKVNGDTPFDYIGIGDNNRPGDSIFLNNSVQYSDFNGPGERSWQVRYDLNMA PYGVPGLSFMTRYLNGDNIDGTGLAANSRYRNNDGTPIYGDNGKH" BASE COUNT 281 a 351 c 291 g 215 t ORIGIN 1 gcgcccaaat ggcaacagca gcaccgttcg tcagtgacca gtctgaagcc aagggctttg 61 tagatggcag cactcttgac ctgaagttgc gcaactacta ttacgaccgt gacaagaaaa 121 acaccactgg ccctaaccgt cgcgacgaca aagactggac tcaaggtctg tgggtcaact 181 atagctccgg ctacacccaa ggcaccgttg gcgtcggcgt aaaagcattc ggctacttcg 241 gcctgaaact ggacggccag agaaaatact ccggttccgg caacctggta accagctccg 301 acggcaccaa cgaagacagt tttggtaaag gcggcggcgc agtcaaattc cgcgtctcga 361 aaaccgaact gaaagtcggc gacatgcaac ctgccaaccc ggtatttggc gtcggcggtt 421 cccgcctcct gcctcagacc gccagcggta tcagcctgca aagcagcgag ctcaaaggcc 481 ttgatgtcga agcgggtcac ttctactccg gcaccagcca ggacgataca agccacagcg 541 gcggcatttt ctctgcgtat tcaggcgtag aagcaaaatc tgccgactat gtaggcggca 601 agtacgcact gaccgatagc ctgggcgtag cgttctatgc tgcgaaactc gaggacatct 661 ggaaccagta ctacggtaac gtgaactacg cactgcctct gagcggtgac cagtccctgg 721 ctttcgacgc caatatctac cgcactgtcg acgaaggcag cgccaatgca ggctcgatca 781 gcaacangac ttattccgct tccgcagcct actcgttcct ggcagcacac accgttacca 841 tcgccttcca gaaagtcaac ggcgacacgc cgttcgacta catcggtatt ggcgacaaca 901 accgcccggg cgactcgatc ttcctgaaca actccgttca gtactccgac ttcaacggtc 961 cgggcgaaag atcctggcag gttcgttatg acctgaacat ggcaccttat ggtgttccag 1021 gcctgagttt catgacccgc tacctcaatg gtgacaacat tgacggaacc ggcctggcag 1081 ccaactcgcg ctatcgcaac aacgatggca ctccgattta tggcgacaac ggcaagcac //