LOCUS       AM087421                1139 bp    DNA     linear   BCT 13-FEB-2007
DEFINITION  Pseudomonas cichorii partial putative oprD gene, strain CFBP 2101.
ACCESSION   AM087421
VERSION     AM087421.1
KEYWORDS    oprD gene.
SOURCE      Pseudomonas cichorii
  ORGANISM  Pseudomonas cichorii
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 1139)
  AUTHORS   Chevalier S.
  JOURNAL   Submitted (23-SEP-2005) to the INSDC. Chevalier S., Laboratory of
            Cold Microbiology, Rouen University, 55 St Germain Street,
            Evreux-27000, FRANCE.
REFERENCE   2
  AUTHORS   Chevalier S., Bodilis J., Jaouen T., Barray S., Feuilloley M.,
            Orange N.
  TITLE     Sequence diversity of the OprD homologue protein from environmental
            fluorescent Pseudomonas strains.
  JOURNAL   Unpublished.
REFERENCE   3
  AUTHORS   Chevalier S., Bodilis J., Jaouen T., Barray S., Feuilloley M.G.J.,
            Orange N.
  TITLE     Sequence diversity of the OprD protein of environmental Pseudomonas
            strains
  JOURNAL   Environ. Microbiol. 9(3), 824-835(2007).
   PUBMED   17298381
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Pseudomonas cichorii"
                     /strain="CFBP 2101"
                     /mol_type="genomic DNA"
                     /country="France"
                     /db_xref="taxon:36746"
     CDS             <1..>1139
                     /codon_start=3
                     /transl_table=11
                     /gene="oprD"
                     /product="putative OprD protein"
                     /function="basic amino acid uptake"
                     /db_xref="GOA:Q3LAH8"
                     /db_xref="InterPro:IPR005318"
                     /db_xref="InterPro:IPR023614"
                     /db_xref="UniProtKB/TrEMBL:Q3LAH8"
                     /protein_id="CAJ32343.1"
                     /translation="AQMATAAPFVSDQSEAKGFVDGSTLDLKLRNYYYDRDKKNTTGP
                     NRRDDKDWTQGLWVNYSSGYTQGTVGVGVKAFGYFGLKLDGQRKYSGSGNLVTSSDGT
                     NEDSFGKGGGAVKFRVSKTELKVGDMQPANPVFGVGGSRLLPQTASGISLQSSELKGL
                     DVEAGHFYSGTSQDDTSHSGGIFSAYSGVEAKSADYVGGKYALTDSLGVAFYAAKLED
                     IWNQYYGNVNYALPLSGDQSLAFDANIYRTVDEGSANAGSISNXTYSASAAYSFLAAH
                     TVTIAFQKVNGDTPFDYIGIGDNNRPGDSIFLNNSVQYSDFNGPGERSWQVRYDLNMA
                     PYGVPGLSFMTRYLNGDNIDGTGLAANSRYRNNDGTPIYGDNGKH"
BASE COUNT          281 a          351 c          291 g          215 t
ORIGIN      
        1 gcgcccaaat ggcaacagca gcaccgttcg tcagtgacca gtctgaagcc aagggctttg
       61 tagatggcag cactcttgac ctgaagttgc gcaactacta ttacgaccgt gacaagaaaa
      121 acaccactgg ccctaaccgt cgcgacgaca aagactggac tcaaggtctg tgggtcaact
      181 atagctccgg ctacacccaa ggcaccgttg gcgtcggcgt aaaagcattc ggctacttcg
      241 gcctgaaact ggacggccag agaaaatact ccggttccgg caacctggta accagctccg
      301 acggcaccaa cgaagacagt tttggtaaag gcggcggcgc agtcaaattc cgcgtctcga
      361 aaaccgaact gaaagtcggc gacatgcaac ctgccaaccc ggtatttggc gtcggcggtt
      421 cccgcctcct gcctcagacc gccagcggta tcagcctgca aagcagcgag ctcaaaggcc
      481 ttgatgtcga agcgggtcac ttctactccg gcaccagcca ggacgataca agccacagcg
      541 gcggcatttt ctctgcgtat tcaggcgtag aagcaaaatc tgccgactat gtaggcggca
      601 agtacgcact gaccgatagc ctgggcgtag cgttctatgc tgcgaaactc gaggacatct
      661 ggaaccagta ctacggtaac gtgaactacg cactgcctct gagcggtgac cagtccctgg
      721 ctttcgacgc caatatctac cgcactgtcg acgaaggcag cgccaatgca ggctcgatca
      781 gcaacangac ttattccgct tccgcagcct actcgttcct ggcagcacac accgttacca
      841 tcgccttcca gaaagtcaac ggcgacacgc cgttcgacta catcggtatt ggcgacaaca
      901 accgcccggg cgactcgatc ttcctgaaca actccgttca gtactccgac ttcaacggtc
      961 cgggcgaaag atcctggcag gttcgttatg acctgaacat ggcaccttat ggtgttccag
     1021 gcctgagttt catgacccgc tacctcaatg gtgacaacat tgacggaacc ggcctggcag
     1081 ccaactcgcg ctatcgcaac aacgatggca ctccgattta tggcgacaac ggcaagcac
//