LOCUS AL832024 4940 bp mRNA linear HUM 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp451J084 (from clone DKFZp451J084);
complete cds.
ACCESSION AL832024
VERSION AL832024.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4940)
AUTHORS Wambutt R., Heubner D., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by AGOWA (Berlin/Germany) within the cDNA sequencing
consortium of the German Genome Project.
This clone (DKFZp451J084) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..4940
/db_xref="H-InvDB:HIT000026936"
/organism="Homo sapiens"
/map="1q21.1"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="451 (synonym: hlcc1). Vector pSport1; host
DH10B; sites NotI + SalI"
/clone="DKFZp451J084"
/tissue_type="human skeletal muscle"
/db_xref="taxon:9606"
CDS 111..3077
/codon_start=1
/gene="DKFZp451J084"
/product="hypothetical protein"
/note="similar to myomegalin (Rattus norvegicus),
differentially spliced"
/db_xref="GOA:Q5VU43"
/db_xref="H-InvDB:HIT000026936.17"
/db_xref="HGNC:HGNC:15580"
/db_xref="InterPro:IPR010630"
/db_xref="InterPro:IPR012943"
/db_xref="UniProtKB/Swiss-Prot:Q5VU43"
/protein_id="CAD89923.1"
/translation="MSNGYRTLSQHLNDLKKENFSLKLRIYFLEERTQQKYEASREDI
YKRNIELKVEVESLKRELQDKKQHLDKTWADVENLNSQNEAELRRQFEERQQETEHVY
ELLENKIQLLQEESRLAKNEAARMAALVEAEKECNLELSEKLKGVTKNWEDVPGDQVK
PDQYTEALAQRDKRIEELNQSLAAQERLVEQLSREKQQLLHLLEEPTSMEVQPMTEEL
LKQQKLNSHETTITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSYELKCAQESS
QKQDGTIQNLKETLKSRERETEELYQVIEGQNDTMAKLREMLHQSQLGQLHSSEGTSP
AQQQVALLDLQSALFCSQLEIQKLQRVVRQKERQLADAKQCVQFVEAAAHESEQQKEA
SWKHNQELRKALQQLQEELQNKSQQLRAWEAEKYNEIRTQEQNIQHLNHSLSHKEQLL
QEFRELLQYRDNSDKTLEANEMLLEKLRQRIHDKAVALERAIDEKFSALEEKEKELRQ
LRLAVRERDHDLERLRDVLSSNEATMQSMESLLRAKGLEVEQLSTTCQNLQWLKEEME
TKFSRWQKEQESIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKE
RMLQDLLSDRNKQVLEHEMEIQGLLQSVSTREQESQAAAEKLVQALMERNSELQALRQ
YLGGRDSLMSQAPISNQQAEVTPTGCLGKQTDQGSMQIPSRDDSTSLTAKEDVSIPRS
TLGDLDTVAGLEKELSNAKEELELMAKKERESQMELSALQSMMAVQEEELQVQAADME
SLTRNIQIKEDLIKDLQMQLVDPEDIPAMERLTQEVLLLREKVASVESQGQEISGNRR
QQLLLMLEGLVDERSRLNEALQAERQLYSSLVKFHAHPESSERDRTLQVELEGAQVLR
SRLEEVLGRSLERLNRLETLAAIGGAAAGDDTEDTSTEFTDSIEEEAAHHSHQQVSQC
QGLGLPGWTAHSPSEV"
regulatory 4902..4907
/regulatory_class="polyA_signal_sequence"
polyA_site 4919
BASE COUNT 1485 a 1099 c 1196 g 1160 t
ORIGIN
1 ggcagcctca gcagcgtccc agccggctgg cttcatgctg cggtgcagct gcaccatgtt
61 cctgggttga gggggcaatc gggcacgctc ctccccatgg gttgcccatc atgtctaatg
121 gatatcgcac tctgtcccag cacctcaatg acctgaagaa ggagaacttc agcctcaagc
181 tgcgcatcta cttcctggag gagcgcacgc aacagaagta tgaggccagc cgggaggaca
241 tctacaagcg gaacattgag ctgaaggttg aagtggagag cttgaaacga gaactccagg
301 acaagaaaca gcatctggat aaaacatggg ctgatgtgga gaatctcaac agtcagaatg
361 aagctgagct ccgacgccag tttgaggagc gacagcagga gacggagcat gtttatgagc
421 tcttggagaa taagatccag cttctgcagg aggaatccag gctagcaaag aatgaagctg
481 cgcggatggc agctctggtg gaagcagaga aggagtgtaa cctggagctc tcagagaaac
541 tgaagggagt caccaaaaac tgggaagatg taccaggaga ccaggtcaag cccgaccaat
601 acactgaggc cctggcccag agggacaaga gaattgaaga actgaatcag agcctggctg
661 cccaggagag gcttgtagaa cagctatctc gggagaaaca acaactgcta catctgttgg
721 aggagccaac tagcatggaa gtgcagccca tgactgaaga gttgctgaaa caacaaaagc
781 tgaattcaca tgagaccact ataactcagc agtctgtatc tgattcccac ttggcagaac
841 tccaggaaaa aatccagcaa acagaggcca ccaacaagat tcttcaagag aaacttaatg
901 aaatgagcta tgaactaaag tgtgctcagg agtcgtctca aaagcaagat ggtacaattc
961 agaacctcaa ggaaactctg aaaagcaggg aacgtgagac tgaggagttg taccaggtaa
1021 ttgaaggtca aaatgacaca atggcaaagc ttcgagaaat gctgcaccaa agccagcttg
1081 gacaacttca cagctcagag ggtacttctc cagctcagca acaggtagct ctgcttgatc
1141 ttcagagtgc tttattctgc agccaacttg aaatacagaa gctccagagg gtggtacgac
1201 agaaagagcg ccaactggct gatgccaaac aatgtgtgca atttgtagag gctgcagcac
1261 acgagagtga acagcagaaa gaggcttctt ggaaacataa ccaggaattg cgaaaagcct
1321 tgcagcagct acaagaagaa ttgcagaata agagccaaca gcttcgtgcc tgggaggctg
1381 aaaaatacaa tgagattcga acccaggaac aaaacatcca gcacctaaac catagtctga
1441 gtcacaagga gcagttgctt caggaatttc gggagctcct acagtatcga gataactcag
1501 acaaaaccct tgaagcaaat gaaatgttgc ttgagaaact tcgccagcga atacatgata
1561 aagctgttgc tctggagcgg gctatagatg aaaaattctc tgctctagaa gagaaagaaa
1621 aagaactgcg ccagcttcgt cttgctgtga gagagcgaga tcatgactta gagagactgc
1681 gcgatgtcct ctcctccaat gaagctacta tgcaaagtat ggagagtctc ctgagggcca
1741 aaggcctgga agtggaacag ttatctacta cctgtcaaaa cctccagtgg ctgaaagaag
1801 aaatggaaac caaatttagc cgttggcaga aggaacaaga gagtatcatt cagcagttac
1861 agacgtctct tcatgatagg aacaaagaag tggaggatct tagtgcaaca ctgctctgca
1921 aacttggacc agggcagagt gagatagcag aggagctgtg ccagcgtcta cagcgaaagg
1981 aaaggatgct gcaggacctt ctaagtgatc gaaataaaca agtgctggaa catgaaatgg
2041 agattcaagg cctgcttcag tctgtgagca ccagggagca ggaaagccaa gctgctgcag
2101 agaagttggt gcaagcctta atggaaagaa attcagaatt acaggccctg cgccaatatt
2161 taggagggag agactccctg atgtcccaag cacccatctc taaccaacaa gctgaagtta
2221 cccccactgg ctgtcttgga aaacagactg atcaaggttc aatgcagata ccttccagag
2281 atgatagcac ttcattgact gccaaagagg atgtcagcat acccagatcc acattaggag
2341 acttggacac agttgcaggg ctggaaaaag aactgagtaa tgccaaagag gaacttgaac
2401 tcatggctaa aaaagaaaga gaaagtcaga tggaactttc tgctctacag tccatgatgg
2461 ctgtgcagga agaagagctg caggtgcagg ctgctgatat ggagtctctg accaggaaca
2521 tacagattaa agaagatctc ataaaggacc tgcaaatgca actggttgat cctgaagaca
2581 taccagctat ggaacgcctg acccaggaag tcttacttct tcgggaaaaa gttgcttcag
2641 tagaatccca gggtcaagaa atttcaggaa accgaagaca acagttgctg ctgatgctag
2701 aaggactagt agatgaacgg agtcggctca atgaggcctt acaagcagag agacagctct
2761 atagcagtct ggtgaagttc catgcccatc cagagagctc tgagagagac cgaactctgc
2821 aggtggaact ggaaggggct caggtgttac gcagtcggct agaggaagtt cttggaagaa
2881 gcttggagcg cttaaacagg ctggagaccc tggccgccat tggaggtgca gctgcagggg
2941 atgacaccga agatacaagc actgagttca ctgacagtat tgaggaggag gctgcacacc
3001 atagtcacca gcaagtaagt cagtgtcagg gtctgggact tccagggtgg acagcacaca
3061 gcccttctga ggtctgatag tctcctgcag cccttgcgga cttagtgaga agatatcttt
3121 ttacataaac tacttctcag tcatcttcct gttctccttg aacttcccag ctgcctttcc
3181 aacccatatc ttcactccat ttttctctcc aatccaccct ttggtttgta ttgtatctct
3241 ttcttctgct tccttccccc tcctacccac ctttgcccct atttattctc tgtagctata
3301 gcttcagaag catttttact tgcaagacga tggacacatt ccccttgggc tttttgtaac
3361 tgaaacgcac cacagaagac agggagtcat cgaagggctg ctcggggagg tggcagggcg
3421 gaggacctgc ttgggaagaa actccaagaa gattggaatg cttccaaagc aagaatcttt
3481 ctcagtgaaa tctcattata caaagggaac cttatgcaac ctgacaaacc actgaggtca
3541 tggtgactca gtgatcagca gatggtactt caacagcaat cccctgtcaa acctcagaac
3601 ttgaggctga aacattgctt ccacccacca tcagtgaaga tgtaactagc atgttacaag
3661 agtgaataat ctggacttca gagattaagt caccaatagt gatctcacag gcactcaccg
3721 gaactcctat aatgtctcca ctttgtccat gccatttagc aatctcatct cctaaatgga
3781 ctgtgcctat gattcttaag gagaaagtga atcattggta gatatcctgc acaagcagct
3841 ggactctcca gtaatagctt tcttggggct attaggaaaa ttaaacaaga aatgaggctt
3901 tctgggtctg cctgtatgtc ttctgcataa gacaaagaag agacatcgaa tcaaccaata
3961 agaagagccc aaataagcat cctcaaatct tttgggattt ggcacttggg gacatgagta
4021 gttgtctggg atacgtcata ttctcaacag tttctttgta gtagtaggat caccttctta
4081 taataggatc accttcttgt tgctatagct gtacccgacc ttcccttctc ccttgagtgc
4141 ttgcatgagc tccacttttc cttttgcttg aacagcttct cctgagtccc ccttaccgat
4201 ggttgtgact ttaattatat acatctctgt ccctccagac agatccctct gtcctcactc
4261 tctgatttca ttgaggatct tgggtgagag agagggacct gcaggatgaa caaatgtcta
4321 ctctaagaca gctagattgg gaggttggct ggtcactgat ggttataatg actgtgggac
4381 aggattaact tcagaataaa tgaacaggag acacagatat gaagaaagtt tctgattgat
4441 atggtctgaa gtactcctgg tattgcaagt catttgctct aattctcaat tgtaggcaaa
4501 ctgatttgta aatttgcttc ttcagccttc tttcctgtag cctagcatgg agaatctgac
4561 cagaccccat tttgagaagg tcagcctaca ctggaatgaa ctttttacat tagggcattt
4621 gtatttccct cacaatactt gccacattac ttggcatagg agagatgctt agtgtaatta
4681 taagttaaca agcctttgga tcagggcttg actcatgata gacaaagtat atgcctgctg
4741 gatggaagaa tctcttgggc gagcaccatt tttctttcca tcacctttcc ttgaaaatat
4801 atcttcagct ttgggtagga ggaatcttgg tgtatgaaat cattgcaaat ttacttcatc
4861 ttttctggag tttgaagttg tgactctcct gctaccaatt aaataaagct tactttgcca
4921 taaaaaaaaa aaaaaaaaaa
//