LOCUS AK289798 2981 bp mRNA linear HUM 09-JAN-2008 DEFINITION Homo sapiens cDNA FLJ76750 complete cds, highly similar to Homo sapiens calsyntenin 1 (CLSTN1), transcript variant 2, mRNA. ACCESSION AK289798 VERSION AK289798.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2981) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..2981 /clone="BRAWH3029350" /clone_lib="BRAWH3" /db_xref="H-InvDB:HIT000422595" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="brain" CDS 2..2917 /codon_start=1 /note="highly similar to Homo sapiens calsyntenin 1 (CLSTN1), transcript variant 2, mRNA" /protein_id="BAF82487.1" /transl_table=1 /translation="MLRRPAPALAPAARLLLAGLLCGGGVWAARVNKHKPWLEPTYHG IVTENDNTVLLDPPLIALDKDAPLRFAGEICGFKIHGQNVPFDAVVVGKSTGEGVIRS KEKLDCELQKDYSFTIQAYDCGKGPDGTNVKKSHKATVHIQVNDVNEYAPVFKEKSYK ATVIEGKQYDSILRVEAVDADCSPQFSQICSYEIITPDVPFTVDKDGYIKNTEKLNYG KEHQYKLTVTAYDCGKKRATEDVLVKISIKPTCTPGWQGWNNRIEYEPGTGALAVFPN IHLETCDEPVASVQATVELETSHIGKGCDRDTYSEKSLHRLCGAAAGTAELLPSPSGS LNWTMGLPTDNGHDSDQVFEFNGTQAVRIPDGVVSVSPKEPFTISVWMRHGPFGRKKE TILCSSDKTDMNRHHYSLYVHGCRLIFLFRQDPSEEKKYRPAEFHWKLNQVCDEEWHH YVLNVEFPSVTLYVDGTSHEPFSVTEDYPLHPSKIETQLVVGACWQEFSGVENDNETE PVTVASAGGDLHMTQFFRGNLAGLTLRSGKLADKRVIDCLYTCKEGLDLQVLEDSGRG VQIQAHPSQLVLTLEGEDLGELDKAMQHISYLNSRQFPTPGIRRLKITSTIKCFNEAT CISVPPVDGYVMVLQPEEPKISLSGVHHFARAASEFESSEGVFLFPELRIISTITREV EPEGDGAEDPTVQESLVSEEIVHDLDTCEVTVEGEELNHEQESLEVDMARLQQKGIEV SSSELGMTFTGVDTMASYEEVLHLLRYRNWHARSLLDRKFKLICSELNGRYISNEFKV EVNVIHTANPMEHANHMAAQPQFVHPEHRSFVDLSGHNLANPHPFAVVPSTATVVIVV CVSFLVFMIILGVFRIRAAHRRTMRDQDTGKENEMDWDDSALTITVNPMETYEDQHSS EEEEEEEEEEESEDGEEEDDITSAESESSEEEEGEQGDPQNATRQQQLEWDDSTLSY" BASE COUNT 724 a 818 c 866 g 573 t ORIGIN 1 gatgctgcgc cgccccgctc ccgcgctggc cccggccgcc cggctgctgc tggccgggct 61 gctgtgcggc ggcggggtct gggccgcgcg agttaacaag cacaagccct ggctggagcc 121 cacctaccac ggcatagtca cagagaacga caacaccgtg ctcctcgacc ccccactgat 181 cgcgctggat aaagatgcgc ctctgcgatt tgcaggtgag atttgtggat ttaaaattca 241 cgggcagaat gtcccctttg atgcagtggt agtgggtaaa tccactggtg agggagtcat 301 tcgctccaaa gagaaactgg actgtgagct gcagaaagac tattcattca ccatccaggc 361 ctatgattgt gggaagggac ctgatggcac caacgtgaaa aagtctcata aagcaactgt 421 tcatattcag gtgaacgacg tgaatgagta cgcgcccgtg ttcaaggaga agtcctataa 481 agccacggtc atcgagggga agcagtacga cagcattttg agggtggagg ccgtggatgc 541 cgactgctcc cctcagttca gccagatttg cagctacgaa atcatcactc cagacgtgcc 601 ctttactgtt gacaaagatg gttatataaa aaacacagag aaattaaact acgggaaaga 661 acatcaatat aagctgaccg tcactgccta tgactgtggg aagaaaagag ccacagaaga 721 tgttttggtg aagatcagca ttaagcccac ctgcacccct gggtggcaag gatggaacaa 781 caggattgag tatgagccgg gcaccggcgc gttggccgtc tttccaaata tccacctgga 841 gacatgtgac gagccagtcg cctcagtaca ggccacagtg gagctagaaa ccagccacat 901 agggaaaggc tgcgaccgag acacctactc agagaagtcc ctccaccggc tctgtggtgc 961 ggccgcgggc actgccgagc tgctgccatc cccgagtgga tccctcaact ggaccatggg 1021 cctgcccacc gacaatggcc acgacagcga ccaggtgttt gagttcaacg gcacccaggc 1081 agtgaggatc ccggatggcg tcgtgtcggt cagccccaaa gagccgttca ccatctcggt 1141 gtggatgaga catgggccat tcggcaggaa gaaggagaca attctttgca gttctgataa 1201 aacagatatg aatcggcacc actactccct ctatgtccac gggtgccggc tgatcttcct 1261 cttccgtcag gatccttctg aggagaagaa atacagacct gcagagttcc actggaagtt 1321 gaatcaggtc tgtgatgagg aatggcacca ctacgtcctc aatgtagaat tcccgagtgt 1381 gactctctat gtggatggca cgtcccacga gcccttctct gtgactgagg attacccgct 1441 ccatccatcc aagatagaaa ctcagctcgt ggtgggggct tgctggcaag agttttcagg 1501 agttgaaaat gacaatgaaa ctgagcctgt gactgtggcc tctgcaggtg gcgacctgca 1561 catgacccag tttttccgag gcaatctggc tggcttaact ctccgttccg ggaaactcgc 1621 ggataagagg gtgatcgact gtctgtatac ctgcaaggag gggctggacc tgcaggtcct 1681 cgaagacagt ggcagaggcg tgcagatcca agcacacccc agccagttgg tattgacctt 1741 ggagggagaa gacctcgggg aattggataa ggccatgcag cacatctcgt acctgaactc 1801 ccggcagttc cccacgcccg gaattcgcag actcaaaatc accagcacaa tcaagtgttt 1861 taacgaggcc acctgcattt cggtcccccc ggtagatggc tacgtgatgg ttttacagcc 1921 cgaggagccc aagatcagcc tgagtggcgt ccaccatttt gcccgagcag cttctgaatt 1981 tgaaagctca gaaggggtgt tccttttccc tgagcttcgc atcatcagca ccatcacgag 2041 agaagtggag cctgaagggg atggggctga ggaccccaca gttcaagaat cactggtgtc 2101 cgaggagatc gtgcacgacc tggatacctg tgaggtcacg gtggagggag aggagctgaa 2161 ccacgagcag gagagcctgg aggtggacat ggcccgcctg cagcagaagg gcattgaagt 2221 gagcagctct gaactgggca tgaccttcac aggcgtggac accatggcca gctacgagga 2281 ggttttgcac ctgctgcgct atcggaactg gcatgccagg tccttgcttg accggaagtt 2341 taagctcatc tgctcagagc tgaatggccg ctacatcagc aacgaattta aggtggaggt 2401 gaatgtaatc cacacggcca accccatgga acacgccaac cacatggctg cccagccaca 2461 gttcgtgcac ccggaacacc gctcctttgt tgacctgtca ggccacaacc tggccaaccc 2521 ccacccgttc gcagtcgtcc ccagcactgc gacagttgtg atcgtggtgt gcgtcagctt 2581 cctggtgttc atgattatcc tgggggtatt tcggatccgg gccgcacatc ggcggaccat 2641 gcgggatcag gacaccggga aggagaacga gatggactgg gacgactctg ccctgaccat 2701 caccgtcaac cccatggaga cctatgagga ccagcacagc agtgaggagg aggaggaaga 2761 ggaagaggaa gaggaaagcg aggacggcga agaagaggat gacatcacca gcgccgagtc 2821 ggagagcagc gaggaggagg agggggagca gggcgacccc cagaacgcaa cccggcagca 2881 gcagctggag tgggatgact ccaccctcag ctactgaccc gtgcccccgg ccacctcggt 2941 ttctgctttc gaagactctg ctgccatccg ttctcccagt c //