LOCUS AK288993 1708 bp mRNA linear PLN 16-FEB-2008
DEFINITION Oryza sativa Japonica Group cDNA, clone: J090087O04, full insert
sequence.
ACCESSION AK288993
VERSION AK288993.1
KEYWORDS FLI_CDNA; CAP trapper.
SOURCE Oryza sativa Japonica Group (Japanese rice)
ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE 1 (bases 1 to 1708)
AUTHORS Kikuchi,S., Adachi,J., Aizawa,K., Akimura,T., Arakawa,T.,
Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A.,
Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N.,
Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y.,
Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y.,
Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H.,
Kawagashira,N., Kawai,J., Kawamata,M., Kishikawa-Hirozane,T.,
Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y.,
Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T.,
Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T.,
Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M.,
Nagata,T., Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R.,
Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M.,
Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R.,
Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D.,
Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T.,
Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K.,
Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y.,
Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M.,
Yasunishi,A., Yazaki,J., Yokomizo,S., Yoshimura,A., Eguchi,K.,
Kanamori,H., Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and
Bito,T.
TITLE Direct Submission
JOURNAL Submitted (04-SEP-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Shoshi Kikuchi
National Institute of Agrobiological Sciences, Division of Genome
and Biodiversity Research; 2-1-2 Kannondai, Tsukuba, Ibaraki
305-8602, Japan
REFERENCE 2
AUTHORS Kikuchi,S.
TITLE Oryza sativa full length cDNA
JOURNAL Published Only in Database(2007)
COMMENT This clone is one of the 1.9K full-length cDNA clones from
japonica rice.
URL:http://cdna01.dna.affrc.go.jp/cDNA/
NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.,
Yamamoto,M. and Nakahama,Y.
NIAS STAFF Institute Sequence group: Eguchi,K., Kanamori,H.,
Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and Bito,T.
FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
Yoshimura,A., Matsubara,K. and Murakami,K.
Genome Exploration Research Group in Riken Genomic Sciences Center
and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
Yasunishi,A. and Hayashizaki,Y.
FEATURES Location/Qualifiers
source 1..1708
/clone="J090087O04"
/cultivar="Nipponbare"
/db_xref="taxon:39947"
/dev_stage="5 days after pollination"
/mol_type="mRNA"
/organism="Oryza sativa Japonica Group"
/tissue_type="pistil"
BASE COUNT 381 a 467 c 427 g 433 t
ORIGIN
1 gggcggcacg agatagtcga ggcggaggcg catccacccg gcgtaggagg ctgtcgacgg
61 cgaggagcga cgccacctcc tcaaggtgcc acccctggag gtaggcggcg acctcgacgc
121 ctcgcctgcg gccgcctccg ccttgcccgc ggccgccgcc gccgcctccg cctccgcctc
181 cgcgcgcgcc agcggccgcc gccgcctcct ccatggccgc gttctccggc tgcgcttcgc
241 cactctccac caccctacgc tctggcctcg ccccgttcac gctgcgccac cgcctccgcc
301 tccgtcgact ccgcgcctcc gccgccaccc tccgcgaggt ctgcgccggc cgcgtcccgg
361 agcacgtcct ccagagggct gaggaggttg gctatgtcgt ccctaccgag gtgcaggagc
421 aatccttgcc tgtcctcttg tctggccaag actgcatcct ccacgcacag acgggttctg
481 gaaagacact tgcctatcta ttgtcggtgt tctcggccat agattttggg agatcctcgg
541 tgcaagcgct ggttgtggtc ccaaccaggg agctcggcat gcaggttacc aaagttgctc
601 gaatacttgc agcaaaggcc tgcaccgtta tggctttgct tgatggtgga atgctaagga
661 ggcaaaagag ttgggtaaag gcagagcccc cggctataat tgttgctact gttgcaagct
721 tgtgccaaat gattgagaag cgtgctttca gtcttcagtc tatgagagta ttagttattg
781 atgaggttga ttttattttt gggtcgtcaa agcaagtaag ctctcttcgc aaaatattaa
841 catcttattc agcagcttcc agtcgtcaga ccatatttgc tagcgcatcg attcctcagc
901 acaatcgctt tgtgcatgac tgtgtgcaac ataagtggac taagactgat gtggttcatg
961 ttcatgtcaa ccctgtacaa cccatgccct ctcacctcca gcacaaatat gcgatctgca
1021 gtaagaagga aaggttgcat gttttactat ccttgcttga gaaggatgca ccaaagtcag
1081 ggattatatt tgttgctgaa cagtctgaga aatcaaagaa ggctggacac cctccttcaa
1141 ctactgttgt tgttgaattc ctgagaacta cgtacatggg aagcctagag gtccttctac
1201 tggaagaaga gatgaatttc aatgcccgtg ctacatcatt caccgaggtc aagggaaaag
1261 gctttcttct agtttccact gacatagcaa gcagagggtt tgacctccca caaaccagcc
1321 acatatacaa ctttgacctt cccaagacgg ctattgacta tctgcatcgt gctggaagaa
1381 ctgggagaga accattctcc aagttagctt gcagcgtgac aaccctcata acagaggatg
1441 agcactttgt attacagaga tttcagaatg aactcaagtt ccattgtgaa gagctacctg
1501 tagaatccat gttcgcattt aacttgtgac gtccctcact ggatgtaaat agccatttct
1561 cttgatttca tcccccggtt ggaggttttt cttttttctg tttaatctag atgaagaggt
1621 ttgaacaagt gtcctggtta ttttccctct ggagagtgga gaaagatgtt gaacgtattt
1681 atattaaagc ataaagttgt tatgtacc
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