LOCUS AK287604 1332 bp mRNA linear PLN 16-FEB-2008 DEFINITION Oryza sativa Japonica Group cDNA, clone: J065054D22, full insert sequence. ACCESSION AK287604 VERSION AK287604.1 KEYWORDS FLI_CDNA; CAP trapper. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1332) AUTHORS Kikuchi,S., Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S., Yoshimura,A., Eguchi,K., Kanamori,H., Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and Bito,T. TITLE Direct Submission JOURNAL Submitted (04-SEP-2007) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Division of Genome and Biodiversity Research; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS Kikuchi,S. TITLE Oryza sativa full length cDNA JOURNAL Published Only in Database(2007) COMMENT This clone is one of the 1.9K full-length cDNA clones from japonica rice. URL:http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Yamamoto,M. and Nakahama,Y. NIAS STAFF Institute Sequence group: Eguchi,K., Kanamori,H., Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and Bito,T. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1332 /clone="J065054D22" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /note="gamma-irradiated (9.5min), after 10hr" /organism="Oryza sativa Japonica Group" /tissue_type="leaf of seedling" BASE COUNT 270 a 360 c 461 g 241 t ORIGIN 1 gaacacacac actactgcga ctgctagtgc tctggtctta cattcgacga actgatcgat 61 attcgatacg acgtctcctc ctacctggag cttgggaaaa atggagagcg actgccagtt 121 cttggtggcg ccgccgcagc cgcacatgta ctacgacacg gcggcggcgg cggtggacga 181 ggcgcagttc ttgcggcaga tggtggccgc ggcggatcac cacgcggccg ccgctgggag 241 aggaggcggc gacggcgacg gcggcggcgg cggcggcggt ggcggggaga ggaagcggcg 301 gttcacggag gagcaggtgc ggtcgctgga gacgacgttc cacgcgcggc gggccaagct 361 ggagccgcgg gagaaggcgg agctggcgcg ggagctcggg ctgcagccgc gccaggtggc 421 catctggttc cagaacaagc gcgcccggtg gcgctccaag cagatcgagc acgactacgc 481 cgcgctccgc gcccagtacg acgccctcca cgcccgcgtc gagtcgctca ggcaggagaa 541 gctcgccctc gcagaccagg tggatgagct gagggggaag ctgaacgagc ggcaagacca 601 gagcggcagc tgcgacggcg gcggcgccga aggggacgac gacgacaaga ggaatagcgt 661 gatgaacgcg agcagcagcg gcctcgtgga ggaggactac gtgagctgcc tcgcggtgcc 721 ggtggtggac gtctcggagg acggctcggc ggcgtgcggc gggtcgtcgt acgagtacga 781 ccatcaccta gactacttgg gcggcggcca gctgcccgat ccgttttgcg gcatgccgga 841 tctgtgggag atatggccaa tggtggaatg gaacgcagta gcatgatcat gctaatcaat 901 cagcgtagca tacagtatat aaatatatat gtgtatgagt acgtgttgta ttgggtctat 961 atagatattt tgctgctgtt gctgctgctg gcttgtgcag tcagttggtc cggagagatc 1021 gactagagcc gcggcgctcg taagctagac gggagagcag attagagatg gaggatgcaa 1081 ccggccggcc ggcaaaccat gcaacaatgc aaatccacac atgcattgcg ttgcacagat 1141 agaaatcctc cggccggtcg atcgccgagt cttgctgctt gttatgctag gatgctacat 1201 taattattca tgttcgtgaa tctggctccc ctgcctcgga gcccgttcgt gcacatatgt 1261 gaaacatata tatcaacgct gcgcatgtgt gccatgccca tgcgcatgcc ggcgcttgtc 1321 gtccatgctt tg //