LOCUS       AK241552                1788 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA, clone: J065177A21, full insert
            sequence.
ACCESSION   AK241552
VERSION     AK241552.1
KEYWORDS    FLI_CDNA; CAP trapper.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1788)
  AUTHORS   Kikuchi,S., Adachi,J., Aizawa,K., Akimura,T., Arakawa,T.,
            Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A.,
            Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N.,
            Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y.,
            Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y.,
            Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H.,
            Kawagashira,N., Kawai,J., Kawamata,M., Kishikawa-Hirozane,T.,
            Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y.,
            Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T.,
            Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T.,
            Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M.,
            Nagata,T., Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R.,
            Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M.,
            Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R.,
            Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D.,
            Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K.,
            Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y.,
            Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M.,
            Yasunishi,A., Yazaki,J., Yokomizo,S., Yoshimura,A., Eguchi,K.,
            Kanamori,H., Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and
            Bito,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2006) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Division of Genome
            and Biodiversity Research; 2-1-2 Kannondai, Tsukuba, Ibaraki
            305-8602, Japan
REFERENCE   2
  AUTHORS   Kikuchi,S.
  TITLE     Oryza sativa full length cDNA
  JOURNAL   Published Only in Database(2006)
COMMENT     This clone is one of the 2.6K full-length cDNA clones from
            japonica rice.
            URL:http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.,
            Yamamoto,M. and Nakahama,Y.
            
            NIAS STAFF Institute Sequence group: Eguchi,K., Kanamori,H.,
            Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and Bito,T.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1788
                     /clone="J065177A21"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /note="50ppm CuSO4 for 1 week"
                     /organism="Oryza sativa Japonica Group"
                     /tissue_type="callus"
     CDS             531..1562
                     /db_xref="Osa1:LOC_Os12g03860"
                     /note="(Rice Genome Annotation Project) major facilitator
                     superfamily antiporter, putative, expressed"
                     /note="mapping to R12-TIGRv4S1-000095R (Chr.12: short
                     arm=1583175, long arm=1588083, direction=reverse) for
                     TIGR Pseudomol ver4"
                     /protein_id="BAH01053.1"
                     /translation="MAVTTRFLLGALNGLLAPIKAYSIEVCRAEHQPLGLSIVSTAWG
                     IGLVVGPATGGYLAQPVKQYPHIFHEKSIFGRFPYLLPCLCISLFALLVLLSCIWLPE
                     TLHKHKGLEVGVETAEASTTQESAESHQKSLFRNWPLMSSIVTYCVFSLHDTAYSEIF
                     SLWTVSDRKYGGLSFSSKDVGQVLAVAGASLLVYQLFIYGWVDKILGPIHSTRISAAL
                     SVPIIAAYPFMTHLSGIRLGVALYSAAMIKSVLAITIITGTSLLQNKAVPQGQRGAAN
                     GIATTAMSLFKAIAPAGAGVIFSWAQKRQHVAFFPGDQMVFLLLNLTEVIGLMLTFKP
                     FLAVPQQYK"
BASE COUNT          430 a          402 c          403 g          553 t
ORIGIN      
        1 tcctcctcca cctcttacct cgtcgtcctg agcgctcctg gttgcagttg ccttctcctg
       61 acaactcctc ttcgccttgg ctaagttagc tagctcatca tcacactctg catacgtgct
      121 tgtcaactcc attgagagcg tcgccgttga tggctgagcc gccggcgacc aaggtgtacc
      181 acgatggctg ccccggctgc gccatggagc agaggaagga ggagcacaag ggcattccct
      241 acagggagtt cctcttcgtt gccatcacca ccctcgcctc ctctctgcca atctcttcct
      301 tgttcccctt cctgtacttc atgataagag acttgcatgt tgctcggaca gaggaagata
      361 ttggattcta tgctggattt cttggcgcat catatatgat cggtcgtggt ttcacatcga
      421 tcttgtgggg tatggtggca gatcgtattg gccgtaagcc tgtcattatc ttttccattt
      481 ttgcagtcat tgtgctcaat actttgtttg gattaagtgt gaagtactgg atggctgtta
      541 ccacaagatt tcttcttggt gctctgaatg gattgcttgc accaataaag gcgtactcta
      601 tcgaagtttg ccgagctgaa catcaacctt tgggcctatc aattgtgagc acagcatggg
      661 ggataggtct tgtagttggc ccagcaactg ggggatacct cgcacagcct gtcaaacaat
      721 atcctcatat ttttcatgag aagtcaatat ttgggagatt tccatatctt ctaccctgcc
      781 tttgtatatc actttttgct ctcttggtcc tcctaagctg tatatggcta ccggagaccc
      841 tacataagca taaaggcctt gaagtgggag tggagacagc tgaagcttct actactcaag
      901 aaagtgcaga atcacatcag aaaagcttat tcagaaattg gccattgatg tcatctattg
      961 tcacatattg tgtgttctcc cttcatgaca cagcatatag tgagatattt tctctgtgga
     1021 ctgtaagtga tagaaaatat ggtggactca gcttttcatc taaagatgtt gggcaagttc
     1081 ttgcagtggc aggtgccagc cttcttgtat atcagctttt tatctacggt tgggttgata
     1141 aaattcttgg acctatccac tcaacccgca tttcagcggc actatctgta ccaattattg
     1201 ctgcttatcc ctttatgaca cacttatcag gaataagact tggtgttgcc ctctatagtg
     1261 cagcaatgat caaaagtgtt cttgctataa ctataattac gggcacctct cttctgcaaa
     1321 acaaagcagt gccacaaggg caacggggtg ctgcaaatgg aatagccaca acagccatgt
     1381 ccttgttcaa ggctattgct ccggctgggg caggagttat attttcttgg gcacaaaaga
     1441 gacaacatgt ggcatttttt ccaggtgacc agatggtatt tcttctactg aatctgaccg
     1501 aggtcattgg gctcatgtta accttcaaac ctttcttggc tgttcctcaa caatataaat
     1561 agaacattca gatactgcta gctggtgtga caaagatcat aaagatgtag ttacagtgag
     1621 taataagtat ggcttggtat taaaagatgg tttagatgtg gttatagcat aatggtagga
     1681 tcatgcagca ttccagtgca gagtctctgt tggattttgt tctgctttgg gcttatgagc
     1741 aagataacct tgtatattgc agtgttgaat ttgaataact gctcttct
//