LOCUS AK121567 1385 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J033034P13, full insert sequence. ACCESSION AK121567 VERSION AK121567.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1385) AUTHORS Kikuchi,S. TITLE Direct Submission JOURNAL Submitted (31-JAN-2003) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Collection, mapping, and annotation of 28K full-length cDNA clones from japonica rice JOURNAL Unpublished (2003) REFERENCE 3 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 32K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Yamamoto,M. and Nakahama,Y. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1385 /clone="J033034P13" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" CDS 76..1086 /db_xref="Osa1:LOC_Os05g47890" /note="(Rice Genome Annotation Project) guanine nucleotide-binding protein beta subunit-like protein, putative, expressed" /note="mapping to R05-TIGRv4S1-001028R (Chr.5: short arm=27376116, long arm=27378590, direction=reverse) for TIGR Pseudomol ver4" /protein_id="BAH00554.1" /translation="MAGQESLTLAGVLRGHNDMVTAIAAPIDNSPFIVSSSRDKSLLV WDITNPSTAVATDPEAAPPEYGVSYRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRL WDLATGRTTRRFVGHTKDVLSVAFSVDNRQIVSAARDNTIKLWNTLGECKYTIGGDHG AGEGHTGWVSCVRFSPNPMAPTIVSGSWDRSVKVWNLTNCKLRTKLEGHNGYVNAVAV SPDGSLCASGGKDGTTLLWDLTEGKMLYKLDAGAIIHSLCFSPNRYWLCAATEDSVKI WDLESKLVMQDLKPEVQAFKSQMLYCTSLSWSADGSTLFAGYTDGTIRVWKVSGFGGY AI" BASE COUNT 264 a 455 c 366 g 300 t ORIGIN 1 gctctcctag ccttcccctc ctccgccgcc gccatctgcc gtcgagagcc ccggttgccc 61 acccccgcgg cgacgatggc gggccaggag tcgctcaccc tggcgggcgt cctgcgcggc 121 cacaacgaca tggtgacggc gatcgcggcg ccgattgaca actcgccctt catcgtctcc 181 tcctcccgcg acaagtcgct gctggtgtgg gacatcacca acccgtccac cgccgtggcc 241 acggatcccg aggcggcccc gccggagtac ggcgtctcgt accgccgcct caccggccac 301 tcccacttcg tccaggacgt cgtcctcagc tccgacggcc agttcgcgct ctcgggatcc 361 tgggacggcg agctccgcct ctgggaccta gccaccggcc gcaccacccg ccgcttcgtc 421 ggccacacca aggacgtcct ctccgtcgcc ttctccgtcg acaaccgcca gatcgtctcc 481 gcggcgcgcg acaacaccat caagctctgg aacaccctcg gcgagtgcaa gtacaccatc 541 ggcggcgacc atggcgccgg cgagggccac accgggtggg tctcctgcgt cagattctcc 601 cccaacccca tggcccccac catcgtctcc ggctcgtggg atcgcagcgt caaggtctgg 661 aacctcacga actgcaagct gcgcaccaag ctcgagggcc acaacggcta cgtcaacgcc 721 gtcgccgtga gcccagacgg ctccttgtgt gcctccggtg ggaaggacgg aaccaccctg 781 ctctgggatc tcaccgaggg gaagatgctg tacaagctcg acgccggcgc catcatccac 841 tccctctgct tctcgcccaa ccgctactgg ctctgcgccg cgacagagga ctccgtcaag 901 atctgggacc tcgagtccaa gctcgtcatg caggacctca agccagaagt ccaggccttc 961 aagagccaga tgctgtactg cacaagtttg agctggagcg ctgatggcag caccctcttc 1021 gctggctaca ctgatggaac tatcagggtt tggaaggtct cagggtttgg cggctatgca 1081 atctaggtgg tgaatttgtt gaaaggctta ggaatcttaa tttaaacatc gtgatgccta 1141 tcaagttttt gacagttctg aggcataaca tttgcctggt actttctact tcattttcat 1201 taattaatga ttagatttgc caatgagctt atcggtactc tggaactatg gaagaggatc 1261 cttatgcata ttttttgttt ttggctaagt tgaaaagata ttagttatgc aactttcgga 1321 gcctcattgc ctagatgtaa ataatgcttc atcaattgct attttctgat gattttgatg 1381 gtgcg //