LOCUS       AK120952                4830 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J023038N03, full insert
            sequence.
ACCESSION   AK120952
VERSION     AK120952.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 4830)
  AUTHORS   Kikuchi,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2003) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J.,
            Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K.,
            Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H.,
            Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K.,
            Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T.,
            Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y.,
            Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y.,
            Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M.,
            Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Collection, mapping, and annotation of 28K full-length cDNA clones
            from japonica rice
  JOURNAL   Unpublished (2003)
REFERENCE   3
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 32K full-length cDNA clones from
            japonica rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S.,
            Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N.,
            Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., 
            Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., 
            Li,C., Ohtsuki,K., Shishiki,T., Yamamoto,M. and Nakahama,Y.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., 
            Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., 
            Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., 
            Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., 
            Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., 
            Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences 
            Center and Genome Science Laboratory in Riken: Adachi,J., 
            Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., 
            Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., 
            Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., 
            Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., 
            Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., 
            Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., 
            Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., 
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., 
            Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., 
            Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., 
            Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., 
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., 
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., 
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..4830
                     /clone="J023038N03"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..4830
                     /db_xref="Osa1:LOC_Os07g06620"
                     /note="(Rice Genome Annotation Project) protein YABBY,
                     putative, expressed"
                     /note="mapping to R07-TIGRv4S1-000146F (Chr.7: short
                     arm=3218222, long arm=3223054, direction=forward) for
                     TIGR Pseudomol ver4"
BASE COUNT         1406 a          930 c          900 g         1594 t
ORIGIN      
        1 gtatatacta cttccgtccc aaaataagtg cagtcgtgga tatctgtgtc taatgtttga
       61 ctgtctgtct tatttaaaaa aattatgaaa aaattaataa aattagtcac aaaaagtatt
      121 attcatgttt tatcatctaa taacaataaa aatactaatc ataaattttt ttaataagac
      181 gaatggtcaa acgttggaca tgaaagtgca aaactgctga tcgcacccaa agctgctagc
      241 tagtagtacc tccacttacc agaaaccggg ttagccctga cggctaaaaa ccgtcaagaa
      301 taaacgaatg gaaggggatg cttgatcctg tagccccatc tcaagtgacg tgcaatatac
      361 tgtacataaa tgtgtacatg aacttgaatt gttgtattat agtctatata ccactatata
      421 cattgataag acaagaacaa agggttttgg aactttgttc ttcatcgagg gaattaatag
      481 cattaataca aaaatcgtac attgttttgt ttgacagatt aacagtataa tgcaatgtta
      541 tatttaattc atgtttttct tgactccgta aagatagtca ataaagttgt gcatgcatgg
      601 ctttcttgtc aataaatgtg gttcttgcac attgtgcata ccagtcacac attttccatt
      661 ttgttgatgt tgttaggccc aatgttattt ggtatgaaaa tgatgccata ctgccacaca
      721 caaacgaatg cgagatgaca accaacgtta aacaaaaaaa aacagaacct atctgctgat
      781 caaagacaaa ccctgcaagc cagtaacggt aatgcatgca gtagtactgc actaaacagc
      841 agaagtccta aataattaat tcaccatgga atattaagcc ccctggcaac gtagactctt
      901 ctcctaccac tcattctccc aaataagcta cccactccgt ccaacgatat aagcatttct
      961 agattgttaa gtactccctc cattccaaat tgatatacat atagtttttt tgaggttatt
     1021 cctaaatgat ctacatattt gtgttcattc attaggtcta ttcgttattt gtgcattgga
     1081 gtaaatggac attgatgcat gcatccatgc acacaagtat ttataaccca catgcaatat
     1141 catgatttgt tattggctag gagatagtgg ggatggtgca tgcatctagc ttgttgctag
     1201 agtaaatata gtatgagaga gttattagct tttcttggtc ttggtgtaca tatgaaatat
     1261 gtagatcaat ttggaatgga gggagtaaat gtgaaggtta aggagaaaag actttagtct
     1321 ctctcgttta atgagagatt gatggttggg gatggaaggg tgattgagag taagaattgg
     1381 aggtgattgg tgtaacaagt acacaagtgt atgaatgcta ttattaattc ttggataaaa
     1441 ttcaaatgct tatattgttg gacggacgga gtactagcta tatagctagt cacaccagca
     1501 tttgctaatt ggctgctcat ctgctgtacc cacatttcat ttggccttga tctttccaac
     1561 ctctccttgc actcagcttg cagcttagct agctgcacac actgtcctcc cacaagacac
     1621 cccaccaaac accttttctt cctccctttc ttgtgtgtgc ccccactcag atcagccagc
     1681 agctggtagt accctctcta gcttattgca gggccatatc ctctgctagc ttagcttctc
     1741 tcacaaaccc cttaattcca tctcatagac agccaaaagg gtcaagagga aattgggttt
     1801 gtgctctccc caaaatcctc catatatagt gcacaggagg catcattctg ttcatacata
     1861 tctctccctt gcttgctttg ctcctggata tatagctagc ttctttcttt cttcctctct
     1921 ccctgtgtgg cacgcgcctc caatcgatct cttcggtgag tagacgcatc gagatcgggg
     1981 ggaaatgtcg gtccagttta catcggagca tgtttgctat gtcaactgca actattgcaa
     2041 cactatcctt gtggtatcgt cttcctccct catctctttc tctctctagc tctctctctc
     2101 tctctcatat cttgtgtatt tctgttctaa tttgaggtgt ttgccggatc tatatgggga
     2161 gttcaatttt tttgtatatt tttttgaagg ggctaatgcg tgcatgctgt agtccatgca
     2221 tagaggtagc ctaagctagg ggaaaataag caccctaatc aagtatgcta gctacttgtt
     2281 tactaaacta attgcacttt gttttgtcct ggataagttt gtaattttat atttctggag
     2341 agttctccag tacatcgaaa tccagcaatc cggtcttttt gcataaactt ccatgtacat
     2401 ggtaacagaa atgcacagat tttctttatg gcaaacataa aatcatataa atagaaggat
     2461 attgcaaaca tactttgtac tatttctttt catcttctcc aacttttcaa gaaaaaaaaa
     2521 tccatatctt ccacccaagg gtgtcatttt tgtatctcct tgaaacaaga ctgtttctct
     2581 ctgacttgat ccaccttgta cggttttaat ttatttttac agaagggata aactcttctt
     2641 ggttttggat gagaaccaac atatttgtat atatcctata gcggtgcatt atccagatcc
     2701 aacactattt gattatattc tttcgctcat caggcaaaat atcttgtaca aaatggtaat
     2761 tttccttgga aagaatgctt gatttgctca tagagaaaaa aaaaagtatt gtccccgaca
     2821 tacatagttt ttcgacgcat ggggtcatac acatttttgg aaggaacatg tacataagat
     2881 aatattatct gagagctttc tcatgtatgg atctactata ctaccacaaa aagaaagaaa
     2941 taatttcagg tcaaattaaa cttttagatg cgtgcaggtg attaaagcta gcatctttaa
     3001 ccattaatta ttgcctctct agctttagct agctgctcca tgcgataata ccccagtgtc
     3061 tgtactgtgc tgcacacttg gagctattcc tctgattatt ggctgtgccc tgagtgtgcc
     3121 cacctctcca aaaccgaaat tttttatgaa taaacaaatt ttaattaaca aaaaaggctt
     3181 taagctgctg cctgttgcta ccacatcctg cagctttgtc tctcattctg cacatgtgca
     3241 gaaagaagtg gatctgcctg tcatgtcatt ttcctctttg ttgatgtttg cgcaggtggg
     3301 tctcttctac atactctctc tagctagcta gtagtagtag ctatattgtg tgtgtgtgag
     3361 tatgcaatat atatgcatgc gtctcttagt atgtgttgtg ctgaaagaga ggagagtgtg
     3421 acatgaactt ttaactgtaa aagaagtgtg acatgaactt ttaactgtaa agatgcctcc
     3481 tcttttttca tgcttttttt ttggaaagga tgattgtact gttcacacga ccaaatctaa
     3541 cttacctaag tatagatctc agtcatctgc acatagattt ctctatctca atctcaagat
     3601 ctgtctctct gctgtgtctc tctcttcctg tttgtttgtg tgtgtgtgtc tgactgatga
     3661 gatgaatcta gggagatatt cttctttaga cctgattgag atgtcatgtc tctgcctcct
     3721 ggaggccttg agtgtgtgag atgcatcatg cattgcatgg tagtaagaga aaacatgcat
     3781 atatggctca agcttctcca ggcaaagagc tagctaagct ctcaaaaggg agacacactt
     3841 gggaaaaggt gttatttgtg catgatggcc aaataggact caaaagacga tatggatatg
     3901 agacatggtg caacttttga cattcctagc tactagctag ctactttgtc atcacacata
     3961 tatattgact acatacacat atatattgac tacatacaca catacacata tatattgtga
     4021 aacggtacgt agcctagtgg ttgcagtgac ctgagtaaca ccccaaggtt ctgagttcaa
     4081 atatccatag aagtgaattt tagattgggt tatattatgg atggctaagt tctctgtgtg
     4141 ataggctaag ttcctaattt aaaacgggtt atttgtgctt gataggctaa gtttttatcc
     4201 aattggatat agaggccggg taaaaaaata cacttctcta aaaacacaca cacatgcatt
     4261 ggcatttgac aattaatata tatggatata tacttcaatt aatcttgtag ctgcaaggct
     4321 actatttttt ttccagcagc atggtcatct actcacctct tatttgcagt gcatgactga
     4381 acactgttgc agagaacaca ttgaattatt tgaagagaga ccagacggta gcatacgttg
     4441 atacatgttc aggccaatgc tgatacatat agctagcaag ctagctagca tagcatttta
     4501 gcattatttg cttggattct tgtggatcga tctgcgataa ataattttat gaacagttat
     4561 atcttatacc actatttaag aatccaatga atttggacga agggactagg gagtcaatta
     4621 attaggacca ggaggtaaac aataatactg tgtgcttgtg tggtaactct accagactca
     4681 ttaattggag ctacatattc catgtatata tatatgtcat gaaatcctat ttttttctgt
     4741 tttacgtttc tgatagaatt acccctatat atttttatta ataagtttgt tatgcatata
     4801 ataaatcaca gtgttctgag agaggaaacg
//