LOCUS AK120274 1951 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J013048F01, full insert sequence. ACCESSION AK120274 VERSION AK120274.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1951) AUTHORS Kikuchi,S. TITLE Direct Submission JOURNAL Submitted (31-JAN-2003) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Collection, mapping, and annotation of 28K full-length cDNA clones from japonica rice JOURNAL Unpublished (2003) REFERENCE 3 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 32K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Yamamoto,M. and Nakahama,Y. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1951 /clone="J013048F01" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" CDS 148..1623 /db_xref="Osa1:LOC_Os02g43280" /note="(Rice Genome Annotation Project) aldehyde dehydrogenase 3B1, putative, expressed" /note="mapping to R02-TIGRv4S1-001068F (Chr.2: short arm=26073928, long arm=26079598, direction=forward) for TIGR Pseudomol ver4" /protein_id="BAG99946.1" /translation="MAPAMVAAMGEKPKPAVVLGGMVSGLREVYESGRTKDLEWRQSQ LKALIRLLTDKEEEIFAVLHDDLGKHRGESFRDELGILVKSIKYTLQNLKKWAASERA ESPLVAFPATAMVVPEPLGVVLVFSCWNLPLGLALEPLSGAIAAGNAVVLKPSELAPS TAAFLAANIPRYLDSRAVKVVLGGPNVGEELMEHRWDKVLFTGSARIGRIIMAKAVKH LTPVALELGSKCPCIVDWLDSKRDRQIAVNRIIGAKWSTCAGQACIAIDHVIVEERFA PILIELLKSTLKRFMAKPGGMARILNAKHFERLSGYLEDNRVAASVVHGGYMDPKKLN IEPTLLLNPPADSDVMTEEVFGPILPIITVKKIEDCIAYLKSKPKPIAMYAFTNNERL KRRIVEETSSGSVTFNDAVVQYALESVPFGGVGHSGFGQYHGKYSFELFSHKKAVFKR SFLIEFMFRYPPWDERKIGTLRHVFSYNYFLLFFNLLGFRR" BASE COUNT 500 a 463 c 550 g 438 t ORIGIN 1 tggatcaggc caaatcgcct gcaataattc tctcgccgtg taacaacaac acacgcgcca 61 gccgagagaa accaaacact agacccccac cacgagttca cgacgtgcac gagcgagcga 121 gctagaaaag caagcgagag cgagcgcatg gccccggcaa tggtagccgc catgggagag 181 aagccgaagc ccgcagtcgt gttgggcggc atggtgagcg ggctgaggga ggtgtacgag 241 agcgggagga ccaaggacct ggagtggagg cagtcgcagc tcaaggcgct catcaggctc 301 ctcaccgaca aggaggagga gatcttcgcc gtcctccacg acgacctcgg caagcaccgc 361 ggcgagtcgt tccgagacga gcttgggatt cttgtcaagt cgatcaagta cacgctgcaa 421 aacctcaaga aatgggcggc ttcggagagg gcggaatcgc cgttggttgc attccctgcg 481 accgcgatgg tggtgccgga gccgctcggt gtcgtgctcg ttttctcctg ctggaatctg 541 ccactaggct tagcgttgga gccactctcc ggcgccatag cggccggcaa cgccgttgtt 601 ctgaagccct ccgagctcgc gccgtccacc gccgcgttcc tcgccgccaa catcccgagg 661 tatctggaca gcagggcagt gaaggtcgtc ctgggaggcc ccaatgttgg agaggaactc 721 atggagcaca gatgggacaa ggttcttttc accgggagtg ccagaatagg acgcattatc 781 atggctaaag cagtcaaaca cttgaccccg gttgcacttg aactgggttc gaaatgccca 841 tgcatcgttg attggctgga cagtaagagg gataggcaga ttgcggtgaa ccgcataatc 901 ggagcgaaat ggtcgacttg tgctggtcag gcttgcatcg ccatcgatca cgtaatcgtc 961 gaggagagat ttgcaccgat tctgattgag ctactgaaat caactcttaa gaggttcatg 1021 gccaaaccgg gtggcatggc ccgtatcctg aacgcaaaac attttgagag gttgagtggc 1081 tatctggagg ataatagggt ggcagcttct gtagtgcacg gtggttacat ggaccccaag 1141 aaactgaata ttgagccaac cttactgcta aatcctcctg ctgattctga tgtcatgacc 1201 gaggaggtat ttggcccgat tctcccaatc atcacggtaa agaagatcga ggattgcatc 1261 gcgtatttaa agtccaagcc gaaaccgatt gcgatgtacg ccttcaccaa caacgagagg 1321 ctgaaacgcc ggatcgtaga ggaaacgtcg tccgggagtg tcacattcaa cgacgcagtt 1381 gtgcagtacg ctcttgaaag cgtccctttc ggcggagttg gccatagcgg attcggacag 1441 taccacggca agtactcatt cgagctgttc agccacaaga aggcggtgtt caagagaagc 1501 tttctgatcg agttcatgtt cagataccca ccatgggatg agagaaagat cgggacgctg 1561 aggcacgtct tcagctataa ctacttcttg ctgttcttca acctgctcgg ctttaggaga 1621 tgaagaagcc agccgaagaa agatttcggc tgtgaagaag taagcagaga aagaagctac 1681 tactatatag tagtatatag tagtagtaat atactacagc taaacacgtg gattatatac 1741 ggttctacct tgtgtgatgt gataatgtat cactatactt cagttgcata ttgtattgtc 1801 acgttctatg ctcttattta ttgtactctt tggaaagaaa gggagggatt gttttatttt 1861 ttttaaaaaa atgactagtg gaaatagggt gctccgacat gttatacata aaagaagata 1921 tgtaaagagt ttaagggtgc tttggatcct c //