LOCUS       AK120274                1951 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J013048F01, full insert
            sequence.
ACCESSION   AK120274
VERSION     AK120274.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1951)
  AUTHORS   Kikuchi,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2003) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J.,
            Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K.,
            Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H.,
            Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K.,
            Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T.,
            Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y.,
            Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y.,
            Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M.,
            Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Collection, mapping, and annotation of 28K full-length cDNA clones
            from japonica rice
  JOURNAL   Unpublished (2003)
REFERENCE   3
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 32K full-length cDNA clones from
            japonica rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S.,
            Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N.,
            Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., 
            Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., 
            Li,C., Ohtsuki,K., Shishiki,T., Yamamoto,M. and Nakahama,Y.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., 
            Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., 
            Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., 
            Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., 
            Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., 
            Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences 
            Center and Genome Science Laboratory in Riken: Adachi,J., 
            Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., 
            Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., 
            Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., 
            Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., 
            Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., 
            Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., 
            Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., 
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., 
            Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., 
            Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., 
            Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., 
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., 
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., 
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1951
                     /clone="J013048F01"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     CDS             148..1623
                     /db_xref="Osa1:LOC_Os02g43280"
                     /note="(Rice Genome Annotation Project) aldehyde
                     dehydrogenase 3B1, putative, expressed"
                     /note="mapping to R02-TIGRv4S1-001068F (Chr.2: short
                     arm=26073928, long arm=26079598, direction=forward) for
                     TIGR Pseudomol ver4"
                     /protein_id="BAG99946.1"
                     /translation="MAPAMVAAMGEKPKPAVVLGGMVSGLREVYESGRTKDLEWRQSQ
                     LKALIRLLTDKEEEIFAVLHDDLGKHRGESFRDELGILVKSIKYTLQNLKKWAASERA
                     ESPLVAFPATAMVVPEPLGVVLVFSCWNLPLGLALEPLSGAIAAGNAVVLKPSELAPS
                     TAAFLAANIPRYLDSRAVKVVLGGPNVGEELMEHRWDKVLFTGSARIGRIIMAKAVKH
                     LTPVALELGSKCPCIVDWLDSKRDRQIAVNRIIGAKWSTCAGQACIAIDHVIVEERFA
                     PILIELLKSTLKRFMAKPGGMARILNAKHFERLSGYLEDNRVAASVVHGGYMDPKKLN
                     IEPTLLLNPPADSDVMTEEVFGPILPIITVKKIEDCIAYLKSKPKPIAMYAFTNNERL
                     KRRIVEETSSGSVTFNDAVVQYALESVPFGGVGHSGFGQYHGKYSFELFSHKKAVFKR
                     SFLIEFMFRYPPWDERKIGTLRHVFSYNYFLLFFNLLGFRR"
BASE COUNT          500 a          463 c          550 g          438 t
ORIGIN      
        1 tggatcaggc caaatcgcct gcaataattc tctcgccgtg taacaacaac acacgcgcca
       61 gccgagagaa accaaacact agacccccac cacgagttca cgacgtgcac gagcgagcga
      121 gctagaaaag caagcgagag cgagcgcatg gccccggcaa tggtagccgc catgggagag
      181 aagccgaagc ccgcagtcgt gttgggcggc atggtgagcg ggctgaggga ggtgtacgag
      241 agcgggagga ccaaggacct ggagtggagg cagtcgcagc tcaaggcgct catcaggctc
      301 ctcaccgaca aggaggagga gatcttcgcc gtcctccacg acgacctcgg caagcaccgc
      361 ggcgagtcgt tccgagacga gcttgggatt cttgtcaagt cgatcaagta cacgctgcaa
      421 aacctcaaga aatgggcggc ttcggagagg gcggaatcgc cgttggttgc attccctgcg
      481 accgcgatgg tggtgccgga gccgctcggt gtcgtgctcg ttttctcctg ctggaatctg
      541 ccactaggct tagcgttgga gccactctcc ggcgccatag cggccggcaa cgccgttgtt
      601 ctgaagccct ccgagctcgc gccgtccacc gccgcgttcc tcgccgccaa catcccgagg
      661 tatctggaca gcagggcagt gaaggtcgtc ctgggaggcc ccaatgttgg agaggaactc
      721 atggagcaca gatgggacaa ggttcttttc accgggagtg ccagaatagg acgcattatc
      781 atggctaaag cagtcaaaca cttgaccccg gttgcacttg aactgggttc gaaatgccca
      841 tgcatcgttg attggctgga cagtaagagg gataggcaga ttgcggtgaa ccgcataatc
      901 ggagcgaaat ggtcgacttg tgctggtcag gcttgcatcg ccatcgatca cgtaatcgtc
      961 gaggagagat ttgcaccgat tctgattgag ctactgaaat caactcttaa gaggttcatg
     1021 gccaaaccgg gtggcatggc ccgtatcctg aacgcaaaac attttgagag gttgagtggc
     1081 tatctggagg ataatagggt ggcagcttct gtagtgcacg gtggttacat ggaccccaag
     1141 aaactgaata ttgagccaac cttactgcta aatcctcctg ctgattctga tgtcatgacc
     1201 gaggaggtat ttggcccgat tctcccaatc atcacggtaa agaagatcga ggattgcatc
     1261 gcgtatttaa agtccaagcc gaaaccgatt gcgatgtacg ccttcaccaa caacgagagg
     1321 ctgaaacgcc ggatcgtaga ggaaacgtcg tccgggagtg tcacattcaa cgacgcagtt
     1381 gtgcagtacg ctcttgaaag cgtccctttc ggcggagttg gccatagcgg attcggacag
     1441 taccacggca agtactcatt cgagctgttc agccacaaga aggcggtgtt caagagaagc
     1501 tttctgatcg agttcatgtt cagataccca ccatgggatg agagaaagat cgggacgctg
     1561 aggcacgtct tcagctataa ctacttcttg ctgttcttca acctgctcgg ctttaggaga
     1621 tgaagaagcc agccgaagaa agatttcggc tgtgaagaag taagcagaga aagaagctac
     1681 tactatatag tagtatatag tagtagtaat atactacagc taaacacgtg gattatatac
     1741 ggttctacct tgtgtgatgt gataatgtat cactatactt cagttgcata ttgtattgtc
     1801 acgttctatg ctcttattta ttgtactctt tggaaagaaa gggagggatt gttttatttt
     1861 ttttaaaaaa atgactagtg gaaatagggt gctccgacat gttatacata aaagaagata
     1921 tgtaaagagt ttaagggtgc tttggatcct c
//