LOCUS       AK108909                1124 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:002-152-G06, full insert
            sequence.
ACCESSION   AK108909
VERSION     AK108909.1
KEYWORDS    oligo capping; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1124)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1124
                     /clone="002-152-G06"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     CDS             20..784
                     /db_xref="Osa1:LOC_Os01g53260"
                     /db_xref="RAP-DB:Os01g0734000"
                     /note="(RAP Annotation release2) Similar to WRKY DNA
                     binding protein"
                     /note="(Rice Genome Annotation Project) OsWRKY23 -
                     Superfamily of rice TFs having WRKY and zinc finger
                     domains, expressed"
                     /note="mapping to R01-TIGRv4S1-001355F (Chr.1: short
                     arm=30931172, long arm=30934924, direction=forward) for
                     TIGR Pseudomol ver4"
                     /protein_id="BAG98560.1"
                     /translation="MENLQLQGDDHDDEALPHFPYFAVPSPPPLAVAPAASATTSDGH
                     QHGPLEVLEQPPCSNNLHPDGLVDGPQLAATTAVPMMLPAMTSLDWQSLLQTCLQVPP
                     PVLEQQQPAAAAQADQYSGENDHGDLQAAESSGAGNKEKQVMAKGGAGRPSGTKKKAS
                     RPRFAFQTRSDNDILDDGYRWRKYGQKAVKNSKHPRSYYRCTHHTCNVKKQVQRLAKD
                     TSIVVTTYEGVHNHPCEKLMEALTPILKQLQFLSQF"
BASE COUNT          273 a          328 c          321 g          202 t
ORIGIN      
        1 aacctgcgcc gatcgagata tggagaacct ccagctccag ggagatgatc acgacgacga
       61 agcgctccct cacttcccct acttcgcggt gccgtcaccg ccgccgctcg ccgtcgcgcc
      121 ggcggcatcg gcgacgacgt cggatggtca ccagcacggc ccactcgagg tgctcgagca
      181 gccgccgtgt agtaataacc tgcatcccga tggcctggtc gatggccctc agctagcggc
      241 gacgacggcg gtgccgatga tgctgccggc gatgacgtcc ttggactggc agtcgctcct
      301 gcagacgtgc ctgcaggtac cgcctccggt gctggagcag cagcaaccgg cggcggcggc
      361 gcaggcggat cagtacagcg gggagaacga tcacggcgat ctgcaggcgg ccgagagcag
      421 cggggcaggt aacaaggaga agcaggtgat ggcgaagggc ggggcgggga ggccgtcggg
      481 gacgaagaag aaggcgagcc ggccgcggtt cgcgttccag acgaggagcg acaacgacat
      541 cctggacgac ggctaccgat ggaggaagta cgggcagaag gccgtcaaga acagcaagca
      601 ccccaggagc tactaccggt gcacgcacca cacgtgcaac gtgaagaagc aagtgcagcg
      661 gctcgccaag gacacgagca tcgtggtgac tacgtacgag ggcgtgcaca accacccctg
      721 cgagaagctc atggaggccc tcacccccat cctcaagcag ctccagttcc tctcccagtt
      781 ctaattaacg acccatatcg atcggtctcg gtcggtctca aactctgaaa tgatcgatct
      841 ttcaagttgc tacacaaaca caataacaca cattcacgtg tacatatata cctgcaacaa
      901 attaaactct ctgtttagct tggggggaag aaaaggagaa caatgtggcc tacctccccc
      961 gtctcccgtc aatacagtac aatatactgc tagttgatca tgtatgtcgt catactgtat
     1021 atacgtactc cctgtacgtg tatccttgta tattttcata tgtacgctaa gcttacgcat
     1081 atattgtata tgtgacacaa ataatgcccc cggaaagtta aaat
//