LOCUS       AK108750                1441 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:002-150-F05, full insert
            sequence.
ACCESSION   AK108750
VERSION     AK108750.1
KEYWORDS    oligo capping; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1441)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1441
                     /clone="002-150-F05"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..1441
                     /db_xref="Osa1:LOC_Os04g32060"
                     /db_xref="RAP-DB:Os04g0390600"
                     /note="(RAP Annotation release2) Oligopeptide transporter
                     OPT superfamily protein"
                     /note="(Rice Genome Annotation Project) transposon
                     protein, putative, unclassified, expressed"
                     /note="mapping to R04-TIGRv4S1-000384F (Chr.4: short
                     arm=19042456, long arm=19044356, direction=forward) for
                     TIGR Pseudomol ver4"
BASE COUNT          317 a          345 c          334 g          445 t
ORIGIN      
        1 agcttttaag aacacgtttt atttcaactt taatcctagt tatgttgggt atggtcttat
       61 ttccccccat attgtcaact gctcagtttt tcttgggtca gtcatatctt ggggttttct
      121 ttggccattt atcgctaagc aagctggtga ttggtaccca gataacctta gtaacactga
      181 cttcagaggc ctatatgggt acaaggtttt catagcaatt tctgtcatac ttggtgatgg
      241 cctctacaac ttggtaaaag tattccttat tattgcaaag gaaatatgta atgcacgatc
      301 aaaagaacat gacctacctg ttcaagctct acttcaagat gatgacagtt ccagacaatt
      361 attggacgag aaacgtcaaa ctgagatatt ccttaaagac ggcataccta cttggcttgc
      421 tgtttctggt tacattgttc ttgcagcaat atctaccgtg gctgtaccca tcatatttcc
      481 ccaactgaag tggtaccttg tccttgtctg ctacttcctt gctcctgcca ttgccttctg
      541 caactcttac gggatgggcc tcacaaactt gaaccttgca cccacatatg gcaagattgc
      601 cctcttcgtg tttgcctcgc ttgttggcag tgatggtggt gtcattgctg gccttgcagc
      661 atgtggtgta atcatgtcaa tcgtctgctc cacagcggat ctcatgcagg acttcaagag
      721 cggctatctc accctctcct cgcctcgatc gatgttcatt tcccagatga tcggtgtcgc
      781 cctcgggtgc ataatcgctc cactcacact ctggctcttc tggacagcgt ttgacatcgg
      841 tgaccctgac ggcgagtaca aggccccatt tgccatcatc ttcagggaga tggccatcat
      901 cggcatcgaa ggctttgcgg cgctgccaag gcactgcctt gagatctgct gtgggttctt
      961 cttggcagca ctgatcatca acctcatgaa ggatgttgta ccaaaccatg tctccaggtt
     1021 catccccatt ccgatggcga tggccgtgcc attctacatt ggcgcgtatt tcggcgtgga
     1081 catgttcata gggacattga tcctgttcgc ctggcagaag atagaccgga gagaggctga
     1141 tgactatgcg gtggtagttg cgtccggctt gatctgtgga gatggggcct ggagcattcc
     1201 ttctgctgtt ctgtccatcc tgggagttga tccaccgatc tgcatgtcct tcaggccatc
     1261 ttcagcttct gtatgagacg atggatcaaa actttggagt tttcatgcgg ttatatgatt
     1321 gaagctgagc ctctgtaaat gcattcatac aaagtagatt tgtgttgtgt atattttcta
     1381 cttctgtgta caattgtgta gaaaatggga cattggaata gagccgttgt ccacgatgaa
     1441 c
//