LOCUS       AK103582                1908 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J033133A13, full insert
            sequence.
ACCESSION   AK103582
VERSION     AK103582.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1908)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1908
                     /clone="J033133A13"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     CDS             114..1631
                     /db_xref="Osa1:LOC_Os04g39020"
                     /db_xref="RAP-DB:Os04g0464200"
                     /note="(RAP Annotation release2) Betaine-aldehyde
                     dehydrogenase (EC 1.2.1.8) (BADH)"
                     /note="(Rice Genome Annotation Project) betaine-aldehyde
                     dehydrogenase, putative, expressed"
                     /note="mapping to R04-TIGRv4S1-000585R (Chr.4: short
                     arm=22952414, long arm=22957232, direction=reverse) for
                     TIGR Pseudomol ver4"
                     /protein_id="BAG96152.1"
                     /translation="MAAPSAIPRRGLFIGGGWREPSLGRRLPVVNPATEATIGDIPAA
                     TAEDVELAVSAARDAFGRDGGRHWSRAPGAVRAKYLKAIAAKIKDKKSYLALLETLDS
                     GKPLDEAAGDMEDVAACFEYYADLAEALDGKQRAPISLPMENFESYVLKEPIGVVGLI
                     TPWNYPLLMATWKVAPALAAGCTAVLKPSELASLTCLELGGICAEIGLPPGVLNIITG
                     LGTEAGAPLASHPHVDKIAFTGSTETGKRIMITASQMVKPVSLELGGKSPLIVFDDVD
                     IDKAVEWAMFGCFANAGQVCSATSRLLLHEKIAKRFLDRLVAWAKSIKISDPLEEGCR
                     LGSVVSEGQYQKIMKFISTARCEGATILYGGARPQHLKRGFFIEPTIITNVSTSMQIW
                     REEVFGPVICVKEFRTEREAVELANDTHYGLAGAVISNDLERCERISKAIQSGIVWIN
                     CSQPCFVQAPWGGNKRSGFGRELGQWGLDNYLSVKQVTKYCSDEPYGWYRPPSKL"
BASE COUNT          474 a          443 c          525 g          466 t
ORIGIN      
        1 gggtgagaga gagtgctcgt cgtcgatcgc ccaaggtccg ggacaaccca aaaggccgcg
       61 gcgacagcgg agcagcagca gcagcagctc gcgccgcccc ccaaccggaa gccatggccg
      121 cgccgtcggc gatcccccgc cgcggcctgt tcatcggcgg cgggtggcgg gagccgtccc
      181 tcggccgccg cctccccgtc gtcaacccgg ccacggaggc aaccatcggt gacatcccgg
      241 cggccacggc ggaggacgtc gagctcgcgg tgtcggcggc gagggatgcg ttcggccgcg
      301 acggtgggag acactggtcg cgcgcgcctg gggccgtgcg ggccaagtac ctcaaggcga
      361 tcgccgctaa gattaaagat aagaaatctt atctagcttt gttggagact cttgattctg
      421 ggaagcctct ggatgaagca gctggggaca tggaggatgt cgctgcatgc tttgagtatt
      481 atgctgatct ggcagaagct ttagatggga aacaacgggc accaatctct ctacccatgg
      541 aaaattttga gtcctatgta ctcaaagaac ccattggggt tgttggactt atcactccct
      601 ggaattatcc tctgctgatg gctacttgga aggttgcacc tgccctggct gctgggtgta
      661 cagctgtatt aaagccatct gagcttgctt ccctgacatg tttagagctt ggtggaatat
      721 gtgcagaaat tggattacct ccaggagtct tgaacataat tactggtctg ggcactgaag
      781 ctggtgctcc attagcttca catccccatg tggataagat tgcttttact ggaagcacag
      841 aaactggtaa gaggataatg attactgctt cccaaatggt caagcctgtt tcgttagagc
      901 ttggtggcaa aagtcctctt attgtctttg atgatgttga tattgataaa gctgttgagt
      961 gggccatgtt tgggtgtttt gcgaacgctg gtcaagtctg cagtgctact tctcgtctac
     1021 ttttgcatga gaaaattgca aagcgattct tggataggtt ggttgcatgg gcaaagagta
     1081 tcaaaatctc agatccacta gaagaaggtt gcaggctggg gtcagtcgtt agtgaagggc
     1141 agtatcaaaa aataatgaag ttcatctcaa cagcaagatg tgaaggtgcc acaattctat
     1201 atgggggtgc ccgaccacaa cacctcaaaa gggggttctt tattgagcct actattataa
     1261 caaatgttag cacatcaatg caaatttggc gagaggaagt ctttggaccg gtcatctgcg
     1321 ttaaagaatt taggacagag cgtgaagcag tagaacttgc aaatgatact cactatggtc
     1381 tagctggcgc tgtgatttcc aatgatctag agaggtgcga gcgcatttca aaggctatcc
     1441 agtcaggtat cgtttggata aattgctcgc aaccatgctt tgttcaagct ccatggggag
     1501 ggaacaagcg gagtggtttt ggccgggagc taggacagtg gggcctcgat aactacttga
     1561 gcgtgaagca agtcaccaag tactgctcag atgaaccata cggatggtac cggcctccat
     1621 ccaagctgta gatttgtcat tcgtgtcaag agcgacggag cacgtcatta cctgaaagca
     1681 agatcaaccc tgtacattca gaacggacgg acagaatctt ctttacagtt gctcttacgg
     1741 tcttacaata agccttgcat ggcaatagca acttatgaat tacagtatat gatactgcgt
     1801 catcaagcaa gccatgtgtg tgctgtatca gactatcatt cgctttgtcg agcacctgca
     1861 tttgtcacca ctcaccactg ttaaagcaag aatgcaaaat gcaaaatg
//