LOCUS AK101388 2403 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J033036G08, full insert sequence. ACCESSION AK101388 VERSION AK101388.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2403) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2403 /clone="J033036G08" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" CDS 517..1908 /db_xref="Osa1:LOC_Os02g40860" /db_xref="RAP-DB:Os02g0622100" /note="(RAP Annotation release2) Similar to Dual specificity kinase 1" /note="(Rice Genome Annotation Project) casein kinase I isoform delta-like, putative, expressed" /note="mapping to R02-TIGRv4S1-001008F (Chr.2: short arm=24760940, long arm=24766880, direction=forward) for TIGR Pseudomol ver4" /protein_id="BAG95038.1" /translation="MEHVIGGKFKLGRKIGSGSFGELYLGVNIQSSEEVAIKLESVKS RHPQLHYESKLYMLLQGGTGIPHLKWFGVEGEYNVMVIDLLGPSLEDLFNYCNRKFSL KTVLMLADQMINRVEYMHTRGFLHRDIKPDNFLMGLGRKASQVYVIDYGLAKKYRDLQ THKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKA GTKKQKYDKISEKKMLTPVEVLCKSYPTEFISYFHYCRSLRFEDKPDYSYLKRLFRDL FIREGYQLDYIFDWTKQGSESNRLRSSGRTSGLVGPSAERTERAAARQDVPDRFSGTV DPFARRTGSGSGHYGEHTKHRNILDSLLAPKTAVDLDKRRPTSSSRNGSTSRKALLSS SRPSSGDPIDPNRSNLIPTSSGSSRPSTMQRLHQSTGLETRSSLTKTARNVHDDPTLR TFERLSISADRRK" BASE COUNT 661 a 576 c 553 g 613 t ORIGIN 1 gggggtaccc ataatctcca catcctcctc ctcccacctc tactccggcc accggccgcc 61 tcctcccacg ctccccccgc cgccgccgcc gccgccgccg ccgccatcgc cacccgcctc 121 ctccttctag cagtagtaat aaaggaagga agaaaatcca ccgccctacc cctatctatc 181 cgttgcctca cgtccgtttc ccacattttc cgcttccttc gtccatcgcc atctattaac 241 ccgccccccc acgattcctg ccgagaaatt tctccccccc acagagaggg aggcgatccc 301 tagcctcgtc ctgaatctcg cggcgccgcc aattcgatct gcccgcgccg tctcagggcg 361 gcgaatcttg ggctggagtc ggggggagag atccgggatc ttccttttct tgggtgttcc 421 cgggacgcaa atcttgcggc cgccgggcaa tgtgactggg gttcttgtgg ggggtgaggc 481 gattcgcgcg cgcattcggt gctgaatctt gcggggatgg agcatgtgat cggggggaag 541 tttaagctgg ggaggaagat tgggagcgga tcttttgggg agctatacct tggtgtgaat 601 atacagagca gcgaggaggt agccatcaag ttggaatctg taaaatcaag gcatcctcag 661 cttcattatg agtcaaaact atacatgctt ctgcaggggg gaactggaat tcctcatctg 721 aagtggtttg gagtggaggg ggagtacaat gtcatggtta tcgatcttct tggtccaagt 781 ttagaggact tattcaacta ctgcaacaga aagttttctc ttaaaacagt acttatgctt 841 gctgatcaga tgatcaacag ggtagagtac atgcacacta gggggtttct acatcgtgat 901 atcaagccag acaacttcct tatgggttta ggccgcaaag caagccaggt ttatgtcatc 961 gactatggtc ttgcaaagaa ataccgggac ctccaaactc ataagcatat accttacagg 1021 gagaacaaaa atctcacagg aacagcacgc tatgctagtg taaacaccca tcttggagta 1081 gaacaaagca ggagagatga tttagagtct ctgggctatg tgcttatgta tttcttaaga 1141 ggaagccttc cttggcaagg tctaaaagct ggcacaaaaa aacagaaata tgacaaaatt 1201 agtgaaaaga aaatgcttac tccagttgag gttctctgta aatcttatcc cacagagttc 1261 atttcatact tccattactg tcgatctttg cgatttgaag ataaaccaga ctacagctat 1321 ttgaagagac ttttccgaga tctattcatc cgtgaagggt accagcttga ttatatattt 1381 gattggacga agcaaggttc agaaagtaac agattgcgat caagtggaag gacaagtggg 1441 ttggtgggac catctgcaga acggactgaa cgagctgcag caagacagga tgttcctgac 1501 agattctctg gtacagtcga tccatttgct agaagaactg gctctggttc tggccattac 1561 ggagagcaca caaagcacag aaatatattg gattcattac ttgcacccaa gacggctgtt 1621 gatttagata aaagaaggcc cacatcatca tctcgtaatg ggagcacatc aaggaaggct 1681 ctcttgtcaa gcagcagacc aagttctgga gatcccattg atccgaaccg cagtaaccta 1741 attccaacca gcagtggcag cagtcgccca tcaactatgc agaggcttca ccagtcaaca 1801 ggacttgaga ccaggtcctc gcttaccaaa actgcaagaa atgtccatga tgatcccact 1861 ttgaggacct ttgaacgcct ttcaatcagt gctgacagaa ggaaataatg cttcgaagag 1921 caaaagatgt gagttgctgc tccagtgagg acactgggga ttccttcaca cgatgattac 1981 tgatcaacaa gtaaaaacca ttctgtgcta cagatgatgc tgagatatgc ttaagagtga 2041 agtttgctta ctgaatcttg gcgcaaaaga aatggttaaa gaaatcattt tacacgccat 2101 tcagaagaac ccggaccagc aactgtgctg gtccaattaa tgctgatgtt gatcaaatat 2161 ttgtagaaat gttattgaaa taaagcagtt cattactagc aaaatatgta ctatcacgta 2221 gtatttcctt tgtgcactgc aactagaact tctgccactc tgccactata ctcttaagat 2281 aatcaatatc cttttttgcc ttagtgccct ttagatactc cgtcacatta tttccttaaa 2341 aacttggaga tcatgtaatc gttattaata tatcatacga tcagatatcg ttattcaact 2401 agc //